RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 DDX56Q9NY93 547 aaKnown RBP12.37□□□□□ -0.43
TMEM54-206ENST00000482771 NOVA2Q9UNW9 492 aaKnown RBP12.37□□□□□ -0.43
TMEM54-206ENST00000482771 CROCCQ5TZA2 2017 aa12.37□□□□□ -0.43
TMEM54-206ENST00000482771 CCDC168Q8NDH2 2452 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 OTOGQ6ZRI0 2925 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 AGAP14A8MT82 685 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 CFAP99D6REC4 459 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 PRSS44E7EML9 344 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 GYPCP04921 128 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 EDN3P14138 238 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 GABRA4P48169 554 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 CDC16Q13042 620 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 BOP1Q14137 746 aaKnown RBP12.36□□□□□ -0.43
TMEM54-206ENST00000482771 AGAP7PQ5VUJ5 663 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 TLDC1Q6P9B6 456 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 RANBP10Q6VN20 620 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 MCEMP1Q8IX19 187 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 PARP9Q8IXQ6 854 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 NXPE1Q8N323 547 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 OR13C4Q8NGS5 318 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 HEXDCQ8WVB3 486 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 P3H4Q92791 437 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 ULK4Q96C45 1275 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 AGAP4Q96P64 663 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 OR2A14Q96R47 310 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 RUBCNLQ9H714 662 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 C10orf88Q9H8K7 445 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 SLC22A11Q9NSA0 550 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 RSPH14Q9UHP6 348 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 FBXL4Q9UKA2 621 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 TRHDEQ9UKU6 1024 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 ICKQ9UPZ9 632 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 FBN2P35556 2912 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 PKDREJQ9NTG1 2253 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 DOCK10Q96BY6 2186 aa12.36□□□□□ -0.43
TMEM54-206ENST00000482771 FER1L5A0AVI2 2057 aa12.35□□□□□ -0.43
TMEM54-206ENST00000482771 ZSCAN9O15535 394 aaPredicted RBP12.35□□□□□ -0.43
TMEM54-206ENST00000482771 ALOX12BO75342 701 aa12.35□□□□□ -0.43
TMEM54-206ENST00000482771 UGT2B7P16662 529 aa12.35□□□□□ -0.43
TMEM54-206ENST00000482771 CDKN1CP49918 316 aaPredicted RBP12.35□□□□□ -0.43
TMEM54-206ENST00000482771 GEMP55040 296 aa12.35□□□□□ -0.43
TMEM54-206ENST00000482771 OLIG2Q13516 323 aa12.35□□□□□ -0.43
TMEM54-206ENST00000482771 TAZQ16635 292 aa12.35□□□□□ -0.43
TMEM54-206ENST00000482771 ASTE1Q2TB18 679 aaPredicted RBP12.35□□□□□ -0.43
TMEM54-206ENST00000482771 ZNF658BQ4V348 819 aaPredicted RBP12.35□□□□□ -0.43
TMEM54-206ENST00000482771 PRAMEF13Q5VWM6 474 aa12.35□□□□□ -0.43
TMEM54-206ENST00000482771 IGFL2Q6UWQ7 119 aa12.35□□□□□ -0.43
TMEM54-206ENST00000482771 FJX1Q86VR8 437 aa12.35□□□□□ -0.43
TMEM54-206ENST00000482771 DNAJC22Q8N4W6 341 aa12.35□□□□□ -0.43
TMEM54-206ENST00000482771 PPP4R1Q8TF05 950 aa12.35□□□□□ -0.43
TMEM54-206ENST00000482771 HAUS1Q96CS2 278 aa12.35□□□□□ -0.43
TMEM54-206ENST00000482771 CNDP1Q96KN2 507 aa12.35□□□□□ -0.43
TMEM54-206ENST00000482771 NDC1Q9BTX1 674 aa12.35□□□□□ -0.43
TMEM54-206ENST00000482771 SLC6A20Q9NP91 592 aa12.35□□□□□ -0.43
TMEM54-206ENST00000482771 SPHK1Q9NYA1 384 aa12.35□□□□□ -0.43
TMEM54-206ENST00000482771 ZDHHC3Q9NYG2 299 aa12.35□□□□□ -0.43
TMEM54-206ENST00000482771 A0A1B0GUH1 482 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 CCDC78A2IDD5 438 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 CCL22O00626 93 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 E2F3O00716 465 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 AKR1B10O60218 316 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 ANXA9O76027 345 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 CRTAMO95727 393 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 CHRM5P08912 532 aaPredicted RBP12.34□□□□□ -0.43
TMEM54-206ENST00000482771 ITGALP20701 1170 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 COMTP21964 271 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 MMP11P24347 488 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 ADRA1AP35348 466 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 SLC1A1P43005 524 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 TSFMP43897 325 aaKnown RBP12.34□□□□□ -0.43
TMEM54-206ENST00000482771 TPM4P67936 248 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 RPA4Q13156 261 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 MSLNQ13421 630 aaPredicted RBP12.34□□□□□ -0.43
TMEM54-206ENST00000482771 ZNF169Q14929 603 aaPredicted RBP12.34□□□□□ -0.43
TMEM54-206ENST00000482771 IRAK1BP1Q5VVH5 260 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 TAS2R42Q7RTR8 314 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 OVCH1Q7RTY7 1134 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 SNX20Q7Z614 316 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 LUZP1Q86V48 1076 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 PIAS4Q8N2W9 510 aaPredicted RBP12.34□□□□□ -0.43
TMEM54-206ENST00000482771 CLDN19Q8N6F1 224 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 CATSPER1Q8NEC5 780 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 OR5AR1Q8NGP9 310 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 NACC2Q96BF6 587 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 CHRNA10Q9GZZ6 450 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 VPS37BQ9H9H4 285 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 COPG2Q9UBF2 871 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 CDC23Q9UJX2 597 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 PLCL2Q9UPR0 1127 aa12.34□□□□□ -0.43
TMEM54-206ENST00000482771 TDRKHQ9Y2W6 561 aaKnown RBP12.34□□□□□ -0.43
TMEM54-206ENST00000482771 PCNX1Q96RV3 2341 aa12.33□□□□□ -0.44
TMEM54-206ENST00000482771 A0A0J9YY10 115 aa12.33□□□□□ -0.44
TMEM54-206ENST00000482771 HACD1B0YJ81 288 aa12.33□□□□□ -0.44
TMEM54-206ENST00000482771 ISM1B1AKI9 464 aa12.33□□□□□ -0.44
TMEM54-206ENST00000482771 SPOPO43791 374 aa12.33□□□□□ -0.44
TMEM54-206ENST00000482771 STSP08842 583 aa12.33□□□□□ -0.44
TMEM54-206ENST00000482771 TPBGLP0DKB5 382 aa12.33□□□□□ -0.44
TMEM54-206ENST00000482771 RBL1P28749 1068 aa12.33□□□□□ -0.44
TMEM54-206ENST00000482771 GRNP28799 593 aaKnown RBP12.33□□□□□ -0.44
TMEM54-206ENST00000482771 MC4RP32245 332 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms