RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 TDRD1Q9BXT4 1180 aaKnown RBP12.47□□□□□ -0.41
VPS52-218ENST00000482399 MUC13Q9H3R2 512 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 ZNF225Q9UK10 706 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 OGDHLQ9ULD0 1010 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 GIT1Q9Y2X7 761 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.46□□□□□ -0.41
VPS52-218ENST00000482399 CCNKO75909 580 aa12.46□□□□□ -0.41
VPS52-218ENST00000482399 CHRNA1P02708 482 aa12.46□□□□□ -0.41
VPS52-218ENST00000482399 ITPKAP23677 461 aa12.46□□□□□ -0.41
VPS52-218ENST00000482399 HK3P52790 923 aa12.46□□□□□ -0.41
VPS52-218ENST00000482399 RHOAP61586 193 aa12.46□□□□□ -0.41
VPS52-218ENST00000482399 DUSP4Q13115 394 aa12.46□□□□□ -0.41
VPS52-218ENST00000482399 CDK5R2Q13319 367 aa12.46□□□□□ -0.41
VPS52-218ENST00000482399 SOWAHCQ53LP3 525 aaPredicted RBP12.46□□□□□ -0.41
VPS52-218ENST00000482399 SZRD1Q7Z422 152 aa12.46□□□□□ -0.41
VPS52-218ENST00000482399 TMEM132CQ8N3T6 1108 aa12.46□□□□□ -0.41
VPS52-218ENST00000482399 BARD1Q99728 777 aaKnown RBP12.46□□□□□ -0.41
VPS52-218ENST00000482399 RTP3Q9BQQ7 232 aa12.46□□□□□ -0.41
VPS52-218ENST00000482399 ZBED2Q9BTP6 218 aa12.46□□□□□ -0.41
VPS52-218ENST00000482399 ZBTB20Q9HC78 741 aaPredicted RBP12.46□□□□□ -0.41
VPS52-218ENST00000482399 C8orf4Q9NR00 106 aa12.46□□□□□ -0.41
VPS52-218ENST00000482399 SH3BP4Q9P0V3 963 aa12.46□□□□□ -0.41
VPS52-218ENST00000482399 TESMINQ9Y4I5 508 aa12.46□□□□□ -0.41
VPS52-218ENST00000482399 FER1L6Q2WGJ9 1857 aa12.46□□□□□ -0.41
VPS52-218ENST00000482399 PDZK1P1A8MUH7 402 aa12.46□□□□□ -0.42
VPS52-218ENST00000482399 LOC730098B7Z3J9 87 aa12.46□□□□□ -0.42
VPS52-218ENST00000482399 PAPSS2O95340 614 aaPredicted RBP12.46□□□□□ -0.42
VPS52-218ENST00000482399 GGT1P19440 569 aa12.46□□□□□ -0.42
VPS52-218ENST00000482399 EPHA2P29317 976 aa12.46□□□□□ -0.42
VPS52-218ENST00000482399 GKP32189 559 aa12.46□□□□□ -0.42
VPS52-218ENST00000482399 GJA5P36382 358 aa12.46□□□□□ -0.42
VPS52-218ENST00000482399 ILF2Q12905 390 aaKnown RBP12.46□□□□□ -0.42
VPS52-218ENST00000482399 MED22Q15528 200 aa12.46□□□□□ -0.42
VPS52-218ENST00000482399 TAB1Q15750 504 aa12.46□□□□□ -0.42
VPS52-218ENST00000482399 INAVAQ3KP66 663 aa12.46□□□□□ -0.42
VPS52-218ENST00000482399 LRRC73Q5JTD7 316 aa12.46□□□□□ -0.42
VPS52-218ENST00000482399 BHLHA9Q7RTU4 235 aa12.46□□□□□ -0.42
VPS52-218ENST00000482399 ANKRD13BQ86YJ7 626 aa12.46□□□□□ -0.42
VPS52-218ENST00000482399 LRRC49Q8IUZ0 686 aa12.46□□□□□ -0.42
VPS52-218ENST00000482399 RHEBL1Q8TAI7 183 aa12.46□□□□□ -0.42
VPS52-218ENST00000482399 ATG10Q9H0Y0 220 aa12.46□□□□□ -0.42
VPS52-218ENST00000482399 GKN1Q9NS71 199 aa12.46□□□□□ -0.42
VPS52-218ENST00000482399 C14orf119Q9NWQ9 140 aa12.46□□□□□ -0.42
VPS52-218ENST00000482399 EHD3Q9NZN3 535 aa12.46□□□□□ -0.42
VPS52-218ENST00000482399 PCDHB14Q9Y5E9 798 aa12.46□□□□□ -0.42
VPS52-218ENST00000482399 TRPV2Q9Y5S1 764 aa12.46□□□□□ -0.42
VPS52-218ENST00000482399 ZFP37Q9Y6Q3 630 aaPredicted RBP12.46□□□□□ -0.42
VPS52-218ENST00000482399 SULT1C4O75897 302 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 MMP2P08253 660 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 PABPC1P11940 636 aaKnown RBP12.45□□□□□ -0.42
VPS52-218ENST00000482399 EPB42P16452 691 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 HOXB8P17481 243 aaPredicted RBP12.45□□□□□ -0.42
VPS52-218ENST00000482399 GP2P55259 537 aaKnown RBP12.45□□□□□ -0.42
VPS52-218ENST00000482399 ZNF33AQ06730 810 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 TOP3AQ13472 1001 aaPredicted RBP12.45□□□□□ -0.42
VPS52-218ENST00000482399 SF3B4Q15427 424 aaKnown RBP eCLIP12.45□□□□□ -0.421e-6■■■■■ 49.7
VPS52-218ENST00000482399 UAP1L1Q3KQV9 507 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 OR4F3Q6IEY1 312 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 COLGALT2Q8IYK4 626 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 SCAIQ8N9R8 606 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 OR5K1Q8NHB7 308 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 INPP5KQ9BT40 448 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 ADGRE3Q9BY15 652 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 FBXO44Q9H4M3 255 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 PAK1IP1Q9NWT1 392 aaPredicted RBP12.45□□□□□ -0.42
VPS52-218ENST00000482399 SCHIP1Q9P0W5 487 aaPredicted RBP12.45□□□□□ -0.42
VPS52-218ENST00000482399 ENPP5Q9UJA9 477 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 RBM47A0AV96 593 aaKnown RBP12.45□□□□□ -0.42
VPS52-218ENST00000482399 SMIM30A4D0T7 59 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 IL10RBQ08334 325 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 TUBA3CQ13748 450 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 CLCA4Q14CN2 919 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 SF1Q15637 639 aaKnown RBP12.45□□□□□ -0.42
VPS52-218ENST00000482399 SPATC1Q76KD6 591 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 CYP4Z1Q86W10 505 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 DCP2Q8IU60 420 aaKnown RBP12.45□□□□□ -0.42
VPS52-218ENST00000482399 RNF175Q8N4F7 328 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 MYEOVQ96EZ4 313 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 DUS3LQ96G46 650 aaKnown RBP12.45□□□□□ -0.42
VPS52-218ENST00000482399 BOCQ9BWV1 1114 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 NUSAP1Q9BXS6 441 aaKnown RBP12.45□□□□□ -0.42
VPS52-218ENST00000482399 FAM126AQ9BYI3 521 aaPredicted RBP12.45□□□□□ -0.42
VPS52-218ENST00000482399 NUAK2Q9H093 628 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 KAT8Q9H7Z6 458 aaKnown RBP12.45□□□□□ -0.42
VPS52-218ENST00000482399 OLA1Q9NTK5 396 aaKnown RBP12.45□□□□□ -0.42
VPS52-218ENST00000482399 A0A096LPI6 279 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 TNFRSF1BP20333 461 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 OGNP20774 298 aaKnown RBP12.45□□□□□ -0.42
VPS52-218ENST00000482399 TACR2P21452 398 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 C21orf33P30042 268 aaPredicted RBP12.45□□□□□ -0.42
VPS52-218ENST00000482399 SLC26A3P40879 764 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 TUSC3Q13454 348 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 SPANXN2Q5MJ10 180 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 CATSPEREQ5SY80 951 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 ZNF280BQ86YH2 543 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 RGL4Q8IZJ4 473 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 GPR156Q8NFN8 814 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 MDGA1Q8NFP4 955 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 EGLN2Q96KS0 407 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 COPS4Q9BT78 406 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms