RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 DEFB110Q30KQ9 67 aa17.95■□□□□ 0.46
CLK1-211ENST00000481641 SYTL3Q4VX76 610 aa17.95■□□□□ 0.46
CLK1-211ENST00000481641 AFTPHQ6ULP2 937 aa17.95■□□□□ 0.46
CLK1-211ENST00000481641 FAM198BQ6UWH4 519 aa17.95■□□□□ 0.46
CLK1-211ENST00000481641 SYTL1Q8IYJ3 562 aa17.95■□□□□ 0.46
CLK1-211ENST00000481641 LMNTD1Q8N9Z9 388 aa17.95■□□□□ 0.46
CLK1-211ENST00000481641 TEX19Q8NA77 164 aa17.95■□□□□ 0.46
CLK1-211ENST00000481641 OR6P1Q8NGX9 317 aa17.95■□□□□ 0.46
CLK1-211ENST00000481641 OR4L1Q8NH43 312 aa17.95■□□□□ 0.46
CLK1-211ENST00000481641 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.95■□□□□ 0.46
CLK1-211ENST00000481641 RANBP9Q96S59 729 aa17.95■□□□□ 0.46
CLK1-211ENST00000481641 SERTAD3Q9UJW9 196 aa17.95■□□□□ 0.46
CLK1-211ENST00000481641 PLAAQ9Y263 795 aa17.95■□□□□ 0.46
CLK1-211ENST00000481641 IQCF5A8MTL0 148 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 E7EQ34 232 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 QSOX1O00391 747 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 ZNF749O43361 778 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 APRTP07741 180 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 CHRM5P08912 532 aaPredicted RBP17.94■□□□□ 0.46
CLK1-211ENST00000481641 CCR7P32248 378 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 RPL22P35268 128 aaKnown RBP17.94■□□□□ 0.46
CLK1-211ENST00000481641 PTGIRP43119 386 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 MLLT10P55197 1068 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 ITGA1P56199 1179 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 SIX1Q15475 284 aaPredicted RBP17.94■□□□□ 0.46
CLK1-211ENST00000481641 MEI1Q5TIA1 1274 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 HOOK3Q86VS8 718 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 VRK3Q8IV63 474 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 FAM20CQ8IXL6 584 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 TBC1D21Q8IYX1 336 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 C19orf47Q8N9M1 422 aaKnown RBP17.94■□□□□ 0.46
CLK1-211ENST00000481641 OR5K2Q8NHB8 316 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 FLVCR1-AS1Q8TAF5 88 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 ADAMTS17Q8TE56 1095 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 THAP4Q8WY91 577 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 SEC14L1Q92503 715 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 FRMD8P1Q9BZ68 369 aaPredicted RBP17.94■□□□□ 0.46
CLK1-211ENST00000481641 TSGA10Q9BZW7 698 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 SLC7A5P2Q9GIP4 190 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 SPRTNQ9H040 489 aaPredicted RBP17.94■□□□□ 0.46
CLK1-211ENST00000481641 SYTL2Q9HCH5 934 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 CIDEBQ9UHD4 219 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 TCFL5Q9UL49 500 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 SNX7Q9UNH6 387 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 TCAF1Q9Y4C2 921 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 CCDC88CQ9P219 2028 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 FER1L5A0AVI2 2057 aa17.94■□□□□ 0.46
CLK1-211ENST00000481641 DOPEY2Q9Y3R5 2298 aa17.93■□□□□ 0.46
CLK1-211ENST00000481641 PTPN13Q12923 2485 aa17.93■□□□□ 0.46
CLK1-211ENST00000481641 MAP3K7O43318 606 aa17.93■□□□□ 0.46
CLK1-211ENST00000481641 KRT86O43790 486 aa17.93■□□□□ 0.46
CLK1-211ENST00000481641 RAB40ALP0C0E4 278 aa17.93■□□□□ 0.46
CLK1-211ENST00000481641 MSL3P1P0C860 447 aa17.93■□□□□ 0.46
CLK1-211ENST00000481641 PEBP1P30086 187 aaKnown RBP17.93■□□□□ 0.46
CLK1-211ENST00000481641 SHMT2P34897 504 aa17.93■□□□□ 0.46
CLK1-211ENST00000481641 CRADDP78560 199 aa17.93■□□□□ 0.46
CLK1-211ENST00000481641 ACVR1Q04771 509 aa17.93■□□□□ 0.46
CLK1-211ENST00000481641 RPS6KA1Q15418 735 aa17.93■□□□□ 0.46
CLK1-211ENST00000481641 FASTKD1Q53R41 847 aaKnown RBP17.93■□□□□ 0.46
CLK1-211ENST00000481641 LYPLAL1Q5VWZ2 237 aa17.93■□□□□ 0.46
CLK1-211ENST00000481641 KRT222Q8N1A0 295 aa17.93■□□□□ 0.46
CLK1-211ENST00000481641 CCDC89Q8N998 374 aa17.93■□□□□ 0.46
CLK1-211ENST00000481641 NLNQ9BYT8 704 aa17.93■□□□□ 0.46
CLK1-211ENST00000481641 ING2Q9H160 280 aa17.93■□□□□ 0.46
CLK1-211ENST00000481641 ACSS2Q9NR19 701 aa17.93■□□□□ 0.46
CLK1-211ENST00000481641 CHRAC1Q9NRG0 131 aa17.93■□□□□ 0.46
CLK1-211ENST00000481641 MARCH4Q9P2E8 410 aaPredicted RBP17.93■□□□□ 0.46
CLK1-211ENST00000481641 POLG2Q9UHN1 485 aa17.93■□□□□ 0.46
CLK1-211ENST00000481641 RIMKLBQ9ULI2 386 aa17.93■□□□□ 0.46
CLK1-211ENST00000481641 ISM1B1AKI9 464 aa17.92■□□□□ 0.46
CLK1-211ENST00000481641 CBSLP0DN79 551 aa17.92■□□□□ 0.46
CLK1-211ENST00000481641 CBSP35520 551 aa17.92■□□□□ 0.46
CLK1-211ENST00000481641 GABRA4P48169 554 aa17.92■□□□□ 0.46
CLK1-211ENST00000481641 SESN2P58004 480 aaPredicted RBP17.92■□□□□ 0.46
CLK1-211ENST00000481641 PRAMEP78395 509 aa17.92■□□□□ 0.46
CLK1-211ENST00000481641 HSPA14Q0VDF9 509 aa17.92■□□□□ 0.46
CLK1-211ENST00000481641 C1orf189Q5VU69 101 aa17.92■□□□□ 0.46
CLK1-211ENST00000481641 C2orf73Q8N5S3 287 aaPredicted RBP17.92■□□□□ 0.46
CLK1-211ENST00000481641 CFAP61Q8NHU2 1237 aa17.92■□□□□ 0.46
CLK1-211ENST00000481641 N4BP2L2Q92802 583 aaPredicted RBP17.92■□□□□ 0.46
CLK1-211ENST00000481641 AP1M1Q9BXS5 423 aa17.92■□□□□ 0.46
CLK1-211ENST00000481641 LZTFL1Q9NQ48 299 aa17.92■□□□□ 0.46
CLK1-211ENST00000481641 PAK5Q9P286 719 aa17.92■□□□□ 0.46
CLK1-211ENST00000481641 CDYLQ9Y232 598 aa17.92■□□□□ 0.46
CLK1-211ENST00000481641 KLHL20Q9Y2M5 609 aa17.92■□□□□ 0.46
CLK1-211ENST00000481641 PCSK5Q92824 1860 aa17.92■□□□□ 0.46
CLK1-211ENST00000481641 A0A0J9YY10 115 aa17.91■□□□□ 0.46
CLK1-211ENST00000481641 H3BMH7 237 aa17.91■□□□□ 0.46
CLK1-211ENST00000481641 ZNF385CQ66K41 422 aaPredicted RBP17.91■□□□□ 0.46
CLK1-211ENST00000481641 ZBTB2Q8N680 514 aa17.91■□□□□ 0.46
CLK1-211ENST00000481641 PPHLN1Q8NEY8 458 aaKnown RBP17.91■□□□□ 0.46
CLK1-211ENST00000481641 TCTN2Q96GX1 697 aa17.91■□□□□ 0.46
CLK1-211ENST00000481641 IL17FQ96PD4 163 aa17.91■□□□□ 0.46
CLK1-211ENST00000481641 TTC1Q99614 292 aa17.91■□□□□ 0.46
CLK1-211ENST00000481641 SLC25A23Q9BV35 468 aa17.91■□□□□ 0.46
CLK1-211ENST00000481641 OR6C2Q9NZP2 312 aa17.91■□□□□ 0.46
CLK1-211ENST00000481641 GOLGA6L6A8MZA4 724 aa17.9■□□□□ 0.46
CLK1-211ENST00000481641 OR2B3O76000 313 aa17.9■□□□□ 0.46
CLK1-211ENST00000481641 TMEM63AO94886 807 aa17.9■□□□□ 0.46
CLK1-211ENST00000481641 KCNJ1P48048 391 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms