RNA–Protein interactions for RNA: ENST00000481385.6

PHF3-204, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-204ENST00000481385 MAGEL2Q9UJ55 1249 aa13.74□□□□□ -0.21
PHF3-204ENST00000481385 EIF3LQ9Y262 564 aaKnown RBP13.74□□□□□ -0.21
PHF3-204ENST00000481385 CHD9Q3L8U1 2897 aa13.74□□□□□ -0.21
PHF3-204ENST00000481385 DYTNA2CJ06 578 aa13.74□□□□□ -0.21
PHF3-204ENST00000481385 C1QCP02747 245 aa13.74□□□□□ -0.21
PHF3-204ENST00000481385 PGRP06401 933 aa13.74□□□□□ -0.21
PHF3-204ENST00000481385 LINC00271P0C7V0 271 aa13.74□□□□□ -0.21
PHF3-204ENST00000481385 CDH1P12830 882 aa13.74□□□□□ -0.21
PHF3-204ENST00000481385 NFKBIAP25963 317 aa13.74□□□□□ -0.21
PHF3-204ENST00000481385 RPS9P46781 194 aaKnown RBP13.74□□□□□ -0.21
PHF3-204ENST00000481385 PRMT2P55345 433 aa13.74□□□□□ -0.21
PHF3-204ENST00000481385 OTUD3Q5T2D3 398 aaPredicted RBP13.74□□□□□ -0.21
PHF3-204ENST00000481385 NEK5Q6P3R8 708 aa13.74□□□□□ -0.21
PHF3-204ENST00000481385 LILRA6Q6PI73 481 aa13.74□□□□□ -0.21
PHF3-204ENST00000481385 USP45Q70EL2 814 aa13.74□□□□□ -0.21
PHF3-204ENST00000481385 FIG4Q92562 907 aa13.74□□□□□ -0.21
PHF3-204ENST00000481385 ULK4Q96C45 1275 aa13.74□□□□□ -0.21
PHF3-204ENST00000481385 AURKBQ96GD4 344 aaPredicted RBP13.74□□□□□ -0.21
PHF3-204ENST00000481385 DPY30Q9C005 99 aa13.74□□□□□ -0.21
PHF3-204ENST00000481385 CLMPQ9H6B4 373 aa13.74□□□□□ -0.21
PHF3-204ENST00000481385 BRD9Q9H8M2 597 aa13.74□□□□□ -0.21
PHF3-204ENST00000481385 VCX3AQ9NNX9 186 aa13.74□□□□□ -0.21
PHF3-204ENST00000481385 PPIL1Q9Y3C6 166 aa13.74□□□□□ -0.21
PHF3-204ENST00000481385 CROCCQ5TZA2 2017 aa13.74□□□□□ -0.21
PHF3-204ENST00000481385 XIRP2A4UGR9 3374 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 IGLV3-16A0A075B6K0 115 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 NEDD8-MDP1E9PL57 170 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 SLC28A1O00337 649 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 BCKDHAP12694 445 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 TACR1P25103 407 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 AOAHP28039 575 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 IST1P53990 364 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 CTBSQ01459 385 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 MAPKAPK3Q16644 382 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 IMPG1Q17R60 797 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 ZNF648Q5T619 568 aaPredicted RBP13.73□□□□□ -0.21
PHF3-204ENST00000481385 BORAQ6PGQ7 559 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 UBE2R2Q712K3 238 aaPredicted RBP13.73□□□□□ -0.21
PHF3-204ENST00000481385 ZNF548Q8NEK5 533 aaPredicted RBP13.73□□□□□ -0.21
PHF3-204ENST00000481385 OR8J3Q8NGG0 315 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 SKA2Q8WVK7 121 aaPredicted RBP13.73□□□□□ -0.21
PHF3-204ENST00000481385 SCAMP4Q969E2 229 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 HAUS8Q9BT25 410 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 TBCDQ9BTW9 1192 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 SMPD3Q9NY59 655 aaPredicted RBP13.73□□□□□ -0.21
PHF3-204ENST00000481385 SLC8A2Q9UPR5 921 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 FADS3Q9Y5Q0 445 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 HEMK1Q9Y5R4 338 aaPredicted RBP13.73□□□□□ -0.21
PHF3-204ENST00000481385 CLOCKO15516 846 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 CLDN9O95484 217 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 ANXA5P08758 320 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 BOP1Q14137 746 aaKnown RBP13.73□□□□□ -0.21
PHF3-204ENST00000481385 TTLL9Q3SXZ7 439 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 TMEM215Q68D42 235 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 TTC33Q6PID6 262 aaPredicted RBP13.73□□□□□ -0.21
PHF3-204ENST00000481385 BEND7Q8N7W2 519 aaPredicted RBP13.73□□□□□ -0.21
PHF3-204ENST00000481385 ITFG1Q8TB96 612 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 YME1L1Q96TA2 773 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 P2RY13Q9BPV8 354 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 THUMPD3Q9BV44 507 aaKnown RBP13.73□□□□□ -0.21
PHF3-204ENST00000481385 ACTR8Q9H981 624 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 LTB4R2Q9NPC1 389 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 HPS4Q9NQG7 708 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.73□□□□□ -0.21
PHF3-204ENST00000481385 ZNF510Q9Y2H8 683 aa13.73□□□□□ -0.21
PHF3-204ENST00000481385 KCNE1BA0A087WTH5 132 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 ABHD14A-ACY1A0A1B0GW23 586 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 KANSL1LA0AUZ9 987 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 ANXA6P08133 673 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 CTSAP10619 480 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 YAP1P46937 504 aaKnown RBP13.72□□□□□ -0.21
PHF3-204ENST00000481385 SPINT3P49223 89 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 CYP4F3Q08477 520 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 LAPTM5Q13571 262 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 GBX1Q14549 363 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 PLCL1Q15111 1095 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 ZIK1Q3SY52 487 aaPredicted RBP13.72□□□□□ -0.21
PHF3-204ENST00000481385 CARD16Q5EG05 197 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 OR2T12Q8NG77 320 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 FBXO30Q8TB52 745 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 HM13Q8TCT9 377 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 SORCS1Q8WY21 1168 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 LINC00597Q9H2U6 94 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 SLC32A1Q9H598 525 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 HCFC2Q9Y5Z7 792 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 WDR47O94967 919 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 CAPGP40121 348 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 PTCHD3Q3KNS1 767 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 ANKRD34AQ69YU3 496 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 PRR23BQ6ZRT6 265 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 RNF165Q6ZSG1 346 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 ANKRD46Q86W74 232 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 HS3ST5Q8IZT8 346 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 FOXJ1Q92949 421 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 TMBIM1Q969X1 311 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 MTG2Q9H4K7 406 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 SERHLQ9NQF3 203 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.72□□□□□ -0.21
PHF3-204ENST00000481385 C1orf109Q9NX04 203 aa13.72□□□□□ -0.21
PHF3-204ENST00000481385 FAM8A1Q9UBU6 413 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms