RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 VPS4AQ9UN37 437 aa18.21■□□□□ 0.51
ABCF3-214ENST00000480562 TDRKHQ9Y2W6 561 aaKnown RBP18.21■□□□□ 0.51
ABCF3-214ENST00000480562 PCSK5Q92824 1860 aa18.2■□□□□ 0.5
ABCF3-214ENST00000480562 BLACEA4D250 179 aa18.2■□□□□ 0.5
ABCF3-214ENST00000480562 C9J4A7 227 aa18.2■□□□□ 0.5
ABCF3-214ENST00000480562 BHMG1C9JSJ3 638 aaPredicted RBP18.2■□□□□ 0.5
ABCF3-214ENST00000480562 CHRM5P08912 532 aaPredicted RBP18.2■□□□□ 0.5
ABCF3-214ENST00000480562 CBSLP0DN79 551 aa18.2■□□□□ 0.5
ABCF3-214ENST00000480562 GP1BBP13224 206 aa18.2■□□□□ 0.5
ABCF3-214ENST00000480562 AGXTP21549 392 aa18.2■□□□□ 0.5
ABCF3-214ENST00000480562 PSMA3P25788 255 aa18.2■□□□□ 0.5
ABCF3-214ENST00000480562 SHMT2P34897 504 aa18.2■□□□□ 0.5
ABCF3-214ENST00000480562 CBSP35520 551 aa18.2■□□□□ 0.5
ABCF3-214ENST00000480562 ATP1A4Q13733 1029 aa18.2■□□□□ 0.5
ABCF3-214ENST00000480562 ITIH4Q14624 930 aa18.2■□□□□ 0.5
ABCF3-214ENST00000480562 C1orf189Q5VU69 101 aa18.2■□□□□ 0.5
ABCF3-214ENST00000480562 ZNF385CQ66K41 422 aaPredicted RBP18.2■□□□□ 0.5
ABCF3-214ENST00000480562 GPR135Q8IZ08 494 aa18.2■□□□□ 0.5
ABCF3-214ENST00000480562 SYCE1Q8N0S2 351 aa18.2■□□□□ 0.5
ABCF3-214ENST00000480562 ATG4AQ8WYN0 398 aa18.2■□□□□ 0.5
ABCF3-214ENST00000480562 N4BP2L2Q92802 583 aaPredicted RBP18.2■□□□□ 0.5
ABCF3-214ENST00000480562 PSMG3-AS1Q96PY0 264 aa18.2■□□□□ 0.5
ABCF3-214ENST00000480562 OR2A14Q96R47 310 aa18.2■□□□□ 0.5
ABCF3-214ENST00000480562 DESI2Q9BSY9 194 aa18.2■□□□□ 0.5
ABCF3-214ENST00000480562 MFRPQ9BY79 579 aa18.2■□□□□ 0.5
ABCF3-214ENST00000480562 IMPACTQ9P2X3 320 aa18.2■□□□□ 0.5
ABCF3-214ENST00000480562 ZNF451Q9Y4E5 1061 aa18.2■□□□□ 0.5
ABCF3-214ENST00000480562 SLC5A10A0PJK1 596 aa18.19■□□□□ 0.5
ABCF3-214ENST00000480562 MIF4GDA9UHW6 222 aaKnown RBP18.19■□□□□ 0.5
ABCF3-214ENST00000480562 OR1I1O60431 355 aa18.19■□□□□ 0.5
ABCF3-214ENST00000480562 OR2B3O76000 313 aa18.19■□□□□ 0.5
ABCF3-214ENST00000480562 SORBS2O94875 1100 aaKnown RBP18.19■□□□□ 0.5
ABCF3-214ENST00000480562 FTH1P02794 183 aa18.19■□□□□ 0.5
ABCF3-214ENST00000480562 CTSBP07858 339 aa18.19■□□□□ 0.5
ABCF3-214ENST00000480562 HBQ1P09105 142 aa18.19■□□□□ 0.5
ABCF3-214ENST00000480562 OTX2P32243 289 aa18.19■□□□□ 0.5
ABCF3-214ENST00000480562 CSE1LP55060 971 aaKnown RBP18.19■□□□□ 0.5
ABCF3-214ENST00000480562 RAPSNQ13702 412 aa18.19■□□□□ 0.5
ABCF3-214ENST00000480562 SPTAN1Q13813 2472 aaKnown RBP18.19■□□□□ 0.5
ABCF3-214ENST00000480562 SYTL3Q4VX76 610 aa18.19■□□□□ 0.5
ABCF3-214ENST00000480562 MLIPQ5VWP3 458 aa18.19■□□□□ 0.5
ABCF3-214ENST00000480562 PACS1Q6VY07 963 aa18.19■□□□□ 0.5
ABCF3-214ENST00000480562 LINC00523Q86TU6 105 aa18.19■□□□□ 0.5
ABCF3-214ENST00000480562 TBC1D21Q8IYX1 336 aa18.19■□□□□ 0.5
ABCF3-214ENST00000480562 DNAAF3Q8N9W5 541 aa18.19■□□□□ 0.5
ABCF3-214ENST00000480562 GALNT11Q8NCW6 608 aa18.19■□□□□ 0.5
ABCF3-214ENST00000480562 FLVCR1-AS1Q8TAF5 88 aa18.19■□□□□ 0.5
ABCF3-214ENST00000480562 HDAC10Q969S8 669 aa18.19■□□□□ 0.5
ABCF3-214ENST00000480562 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.19■□□□□ 0.5
ABCF3-214ENST00000480562 TCTN2Q96GX1 697 aa18.19■□□□□ 0.5
ABCF3-214ENST00000480562 BAG1Q99933 345 aaPredicted RBP18.19■□□□□ 0.5
ABCF3-214ENST00000480562 DPH2Q9BQC3 489 aaPredicted RBP18.19■□□□□ 0.5
ABCF3-214ENST00000480562 SLC2A6Q9UGQ3 507 aa18.19■□□□□ 0.5
ABCF3-214ENST00000480562 MAP4K5Q9Y4K4 846 aa18.19■□□□□ 0.5
ABCF3-214ENST00000480562 PRRC2CQ9Y520 2896 aaKnown RBP18.19■□□□□ 0.5
ABCF3-214ENST00000480562 H3BMH7 237 aa18.18■□□□□ 0.5
ABCF3-214ENST00000480562 QSOX1O00391 747 aa18.18■□□□□ 0.5
ABCF3-214ENST00000480562 KLF7O75840 302 aaPredicted RBP18.18■□□□□ 0.5
ABCF3-214ENST00000480562 GRIA1P42261 906 aa18.18■□□□□ 0.5
ABCF3-214ENST00000480562 GABRA4P48169 554 aa18.18■□□□□ 0.5
ABCF3-214ENST00000480562 KIF5AQ12840 1032 aa18.18■□□□□ 0.5
ABCF3-214ENST00000480562 PRR30Q53SZ7 412 aaPredicted RBP18.18■□□□□ 0.5
ABCF3-214ENST00000480562 FAM20CQ8IXL6 584 aa18.18■□□□□ 0.5
ABCF3-214ENST00000480562 TMEM102Q8N9M5 508 aaPredicted RBP18.18■□□□□ 0.5
ABCF3-214ENST00000480562 OR13J1Q8NGT2 312 aa18.18■□□□□ 0.5
ABCF3-214ENST00000480562 ETNK1Q9HBU6 452 aa18.18■□□□□ 0.5
ABCF3-214ENST00000480562 POLG2Q9UHN1 485 aa18.18■□□□□ 0.5
ABCF3-214ENST00000480562 PADI2Q9Y2J8 665 aa18.18■□□□□ 0.5
ABCF3-214ENST00000480562 A0A0J9YY10 115 aa18.17■□□□□ 0.5
ABCF3-214ENST00000480562 ISM1B1AKI9 464 aa18.17■□□□□ 0.5
ABCF3-214ENST00000480562 DPM1O60762 260 aa18.17■□□□□ 0.5
ABCF3-214ENST00000480562 GOT2P00505 430 aaKnown RBP18.17■□□□□ 0.5
ABCF3-214ENST00000480562 OR56A5P0C7T3 313 aa18.17■□□□□ 0.5
ABCF3-214ENST00000480562 PEBP1P30086 187 aaKnown RBP18.17■□□□□ 0.5
ABCF3-214ENST00000480562 RRADP55042 308 aa18.17■□□□□ 0.5
ABCF3-214ENST00000480562 FOXL2P58012 376 aa18.17■□□□□ 0.5
ABCF3-214ENST00000480562 CDH17Q12864 832 aa18.17■□□□□ 0.5
ABCF3-214ENST00000480562 SLC9A5Q14940 896 aa18.17■□□□□ 0.5
ABCF3-214ENST00000480562 JMJD6Q6NYC1 403 aaPredicted RBP18.17■□□□□ 0.5
ABCF3-214ENST00000480562 MED25Q71SY5 747 aa18.17■□□□□ 0.5
ABCF3-214ENST00000480562 PRUNE1Q86TP1 453 aa18.17■□□□□ 0.5
ABCF3-214ENST00000480562 RAB43Q86YS6 212 aa18.17■□□□□ 0.5
ABCF3-214ENST00000480562 TMEM139Q8IV31 216 aa18.17■□□□□ 0.5
ABCF3-214ENST00000480562 ZNF655Q8N720 491 aaPredicted RBP18.17■□□□□ 0.5
ABCF3-214ENST00000480562 RBMXL3Q8N7X1 1067 aaKnown RBP18.17■□□□□ 0.5
ABCF3-214ENST00000480562 LMNTD1Q8N9Z9 388 aa18.17■□□□□ 0.5
ABCF3-214ENST00000480562 GLIS1Q8NBF1 620 aa18.17■□□□□ 0.5
ABCF3-214ENST00000480562 OR5K2Q8NHB8 316 aa18.17■□□□□ 0.5
ABCF3-214ENST00000480562 DHRS4Q9BTZ2 278 aa18.17■□□□□ 0.5
ABCF3-214ENST00000480562 LRRC4CQ9HCJ2 640 aa18.17■□□□□ 0.5
ABCF3-214ENST00000480562 IRAK4Q9NWZ3 460 aa18.17■□□□□ 0.5
ABCF3-214ENST00000480562 GPR83Q9NYM4 423 aa18.17■□□□□ 0.5
ABCF3-214ENST00000480562 OR6C2Q9NZP2 312 aa18.17■□□□□ 0.5
ABCF3-214ENST00000480562 DHCR7Q9UBM7 475 aaKnown RBP18.17■□□□□ 0.5
ABCF3-214ENST00000480562 G3BP2Q9UN86 482 aaKnown RBP18.17■□□□□ 0.5
ABCF3-214ENST00000480562 PTRH2Q9Y3E5 179 aaKnown RBP18.17■□□□□ 0.5
ABCF3-214ENST00000480562 PCDHGB7Q9Y5F8 929 aa18.17■□□□□ 0.5
ABCF3-214ENST00000480562 AP1M2Q9Y6Q5 423 aa18.17■□□□□ 0.5
ABCF3-214ENST00000480562 FER1L5A0AVI2 2057 aa18.17■□□□□ 0.5
ABCF3-214ENST00000480562 GAS8O95995 478 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms