RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 ADRA1DP25100 572 aa15.16■□□□□ 0.02
HDLBP-238ENST00000479894 HADHAP40939 763 aa15.16■□□□□ 0.02
HDLBP-238ENST00000479894 SPARCL1Q14515 664 aa15.16■□□□□ 0.02
HDLBP-238ENST00000479894 FAM182AQ5T1J6 154 aa15.16■□□□□ 0.02
HDLBP-238ENST00000479894 RNASEH2BQ5TBB1 312 aaKnown RBP15.16■□□□□ 0.02
HDLBP-238ENST00000479894 LYPLAL1Q5VWZ2 237 aa15.16■□□□□ 0.02
HDLBP-238ENST00000479894 LRRC66Q68CR7 880 aa15.16■□□□□ 0.02
HDLBP-238ENST00000479894 SPNS3Q6ZMD2 512 aa15.16■□□□□ 0.02
HDLBP-238ENST00000479894 PRUNE1Q86TP1 453 aa15.16■□□□□ 0.02
HDLBP-238ENST00000479894 SIDT2Q8NBJ9 832 aaKnown RBP15.16■□□□□ 0.02
HDLBP-238ENST00000479894 PPHLN1Q8NEY8 458 aaKnown RBP15.16■□□□□ 0.02
HDLBP-238ENST00000479894 DTX3LQ8TDB6 740 aa15.16■□□□□ 0.02
HDLBP-238ENST00000479894 UBXN4Q92575 508 aa15.16■□□□□ 0.02
HDLBP-238ENST00000479894 SCAMP4Q969E2 229 aa15.16■□□□□ 0.02
HDLBP-238ENST00000479894 LRFN5Q96NI6 719 aa15.16■□□□□ 0.02
HDLBP-238ENST00000479894 GORASP1Q9BQQ3 440 aa15.16■□□□□ 0.02
HDLBP-238ENST00000479894 POT1Q9NUX5 634 aa15.16■□□□□ 0.02
HDLBP-238ENST00000479894 SAMD15Q9P1V8 674 aa15.16■□□□□ 0.02
HDLBP-238ENST00000479894 RIMKLBQ9ULI2 386 aa15.16■□□□□ 0.02
HDLBP-238ENST00000479894 SNX7Q9UNH6 387 aa15.16■□□□□ 0.02
HDLBP-238ENST00000479894 KLF2Q9Y5W3 355 aaPredicted RBP15.16■□□□□ 0.02
HDLBP-238ENST00000479894 ANKRD12Q6UB98 2062 aa15.16■□□□□ 0.02
HDLBP-238ENST00000479894 SPG11Q96JI7 2443 aa15.16■□□□□ 0.02
HDLBP-238ENST00000479894 PCM1Q15154 2024 aa15.16■□□□□ 0.02
HDLBP-238ENST00000479894 A6NL46 340 aa15.15■□□□□ 0.02
HDLBP-238ENST00000479894 STX7O15400 261 aaKnown RBP15.15■□□□□ 0.02
HDLBP-238ENST00000479894 ZG16O60844 167 aa15.15■□□□□ 0.02
HDLBP-238ENST00000479894 STC1P52823 247 aa15.15■□□□□ 0.02
HDLBP-238ENST00000479894 ARL4CP56559 192 aa15.15■□□□□ 0.02
HDLBP-238ENST00000479894 ART3Q13508 389 aa15.15■□□□□ 0.02
HDLBP-238ENST00000479894 TESK1Q15569 626 aa15.15■□□□□ 0.02
HDLBP-238ENST00000479894 PCID2Q5JVF3 399 aa15.15■□□□□ 0.02
HDLBP-238ENST00000479894 DUPD1Q68J44 220 aa15.15■□□□□ 0.02
HDLBP-238ENST00000479894 DENND5AQ6IQ26 1287 aa15.15■□□□□ 0.02
HDLBP-238ENST00000479894 TMC3Q7Z5M5 1100 aa15.15■□□□□ 0.02
HDLBP-238ENST00000479894 TRIM48Q8IWZ4 208 aa15.15■□□□□ 0.02
HDLBP-238ENST00000479894 RBM12BQ8IXT5 1001 aaKnown RBP15.15■□□□□ 0.02
HDLBP-238ENST00000479894 IFT20Q8IY31 132 aa15.15■□□□□ 0.02
HDLBP-238ENST00000479894 NAT8LQ8N9F0 302 aa15.15■□□□□ 0.02
HDLBP-238ENST00000479894 OR52K1Q8NGK4 314 aa15.15■□□□□ 0.02
HDLBP-238ENST00000479894 GABPB2Q8TAK5 448 aaPredicted RBP15.15■□□□□ 0.02
HDLBP-238ENST00000479894 MR1Q95460 341 aa15.15■□□□□ 0.02
HDLBP-238ENST00000479894 LRRC39Q96DD0 335 aa15.15■□□□□ 0.02
HDLBP-238ENST00000479894 AGAP2Q99490 1192 aa15.15■□□□□ 0.02
HDLBP-238ENST00000479894 APOL2Q9BQE5 337 aa15.15■□□□□ 0.02
HDLBP-238ENST00000479894 LRRC1Q9BTT6 524 aa15.15■□□□□ 0.02
HDLBP-238ENST00000479894 TRIM31Q9BZY9 425 aa15.15■□□□□ 0.02
HDLBP-238ENST00000479894 ILKAPQ9H0C8 392 aaPredicted RBP15.15■□□□□ 0.02
HDLBP-238ENST00000479894 NFKBIL1Q9UBC1 381 aaPredicted RBP15.15■□□□□ 0.02
HDLBP-238ENST00000479894 PRKAB1Q9Y478 270 aa15.15■□□□□ 0.02
HDLBP-238ENST00000479894 DOCK10Q96BY6 2186 aa15.15■□□□□ 0.02
HDLBP-238ENST00000479894 SLU7O95391 586 aaKnown RBP15.14■□□□□ 0.01
HDLBP-238ENST00000479894 ALPPP05187 535 aa15.14■□□□□ 0.01
HDLBP-238ENST00000479894 KLK3P07288 261 aaPredicted RBP15.14■□□□□ 0.01
HDLBP-238ENST00000479894 FOLR1P15328 257 aa15.14■□□□□ 0.01
HDLBP-238ENST00000479894 IVDP26440 423 aa15.14■□□□□ 0.01
HDLBP-238ENST00000479894 SLC19A1P41440 591 aa15.14■□□□□ 0.01
HDLBP-238ENST00000479894 CHRNA4P43681 627 aa15.14■□□□□ 0.01
HDLBP-238ENST00000479894 DCDC1P59894 354 aa15.14■□□□□ 0.01
HDLBP-238ENST00000479894 PTSQ03393 145 aa15.14■□□□□ 0.01
HDLBP-238ENST00000479894 CUL1Q13616 776 aa15.14■□□□□ 0.01
HDLBP-238ENST00000479894 PDPK2PQ6A1A2 396 aa15.14■□□□□ 0.01
HDLBP-238ENST00000479894 HIBCHQ6NVY1 386 aaPredicted RBP15.14■□□□□ 0.01
HDLBP-238ENST00000479894 RFLNAQ6ZTI6 216 aa15.14■□□□□ 0.01
HDLBP-238ENST00000479894 FAM92BQ6ZTR7 304 aa15.14■□□□□ 0.01
HDLBP-238ENST00000479894 KMT5CQ86Y97 462 aa15.14■□□□□ 0.01
HDLBP-238ENST00000479894 STYXQ8WUJ0 223 aa15.14■□□□□ 0.01
HDLBP-238ENST00000479894 TM9SF4Q92544 642 aa15.14■□□□□ 0.01
HDLBP-238ENST00000479894 RSC1A1Q92681 617 aa15.14■□□□□ 0.01
HDLBP-238ENST00000479894 SGSM3Q96HU1 749 aa15.14■□□□□ 0.01
HDLBP-238ENST00000479894 ZNF514Q96K75 400 aaPredicted RBP15.14■□□□□ 0.01
HDLBP-238ENST00000479894 TRIM51Q9BSJ1 452 aa15.14■□□□□ 0.01
HDLBP-238ENST00000479894 NLNQ9BYT8 704 aa15.14■□□□□ 0.01
HDLBP-238ENST00000479894 PHACTR1Q9C0D0 580 aa15.14■□□□□ 0.01
HDLBP-238ENST00000479894 FAM83DQ9H4H8 585 aa15.14■□□□□ 0.01
HDLBP-238ENST00000479894 FGF21Q9NSA1 209 aa15.14■□□□□ 0.01
HDLBP-238ENST00000479894 COPG2Q9UBF2 871 aa15.14■□□□□ 0.01
HDLBP-238ENST00000479894 MTRF1LQ9UGC7 380 aaKnown RBP15.14■□□□□ 0.01
HDLBP-238ENST00000479894 ITGB1BP2Q9UKP3 347 aa15.14■□□□□ 0.01
HDLBP-238ENST00000479894 TCFL5Q9UL49 500 aa15.14■□□□□ 0.01
HDLBP-238ENST00000479894 NTNG1Q9Y2I2 539 aa15.14■□□□□ 0.01
HDLBP-238ENST00000479894 SNX24Q9Y343 169 aa15.14■□□□□ 0.01
HDLBP-238ENST00000479894 PCDHGA10Q9Y5H3 936 aa15.14■□□□□ 0.01
HDLBP-238ENST00000479894 A0A1B0GUH1 482 aa15.13■□□□□ 0.01
HDLBP-238ENST00000479894 EIF3HO15372 352 aaKnown RBP eCLIP15.13■□□□□ 0.015e-9■■■■■ 39.7
HDLBP-238ENST00000479894 GRID2O43424 1007 aa15.13■□□□□ 0.01
HDLBP-238ENST00000479894 NUAK1O60285 661 aa15.13■□□□□ 0.01
HDLBP-238ENST00000479894 IPO13O94829 963 aaKnown RBP15.13■□□□□ 0.01
HDLBP-238ENST00000479894 CLDN7O95471 211 aa15.13■□□□□ 0.01
HDLBP-238ENST00000479894 PAMP19021 973 aa15.13■□□□□ 0.01
HDLBP-238ENST00000479894 MCM3P25205 808 aa15.13■□□□□ 0.01
HDLBP-238ENST00000479894 SPINT3P49223 89 aa15.13■□□□□ 0.01
HDLBP-238ENST00000479894 ITGA8P53708 1063 aa15.13■□□□□ 0.01
HDLBP-238ENST00000479894 SESN2P58004 480 aaPredicted RBP15.13■□□□□ 0.01
HDLBP-238ENST00000479894 GUCY2DQ02846 1103 aa15.13■□□□□ 0.01
HDLBP-238ENST00000479894 GPS2Q13227 327 aa15.13■□□□□ 0.01
HDLBP-238ENST00000479894 HIF1AQ16665 826 aa15.13■□□□□ 0.01
HDLBP-238ENST00000479894 NUP210LQ5VU65 1888 aa15.13■□□□□ 0.01
HDLBP-238ENST00000479894 IRGCQ6NXR0 463 aa15.13■□□□□ 0.01
HDLBP-238ENST00000479894 Q6ZS92 163 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms