RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 PIANPQ8IYJ0 282 aa13.98□□□□□ -0.17
SMARCE1-209ENST00000478349 ADGRF3Q8IZF5 1079 aa13.98□□□□□ -0.17
SMARCE1-209ENST00000478349 SGSM3Q96HU1 749 aa13.98□□□□□ -0.17
SMARCE1-209ENST00000478349 HES6Q96HZ4 224 aa13.98□□□□□ -0.17
SMARCE1-209ENST00000478349 PPM1MQ96MI6 270 aa13.98□□□□□ -0.17
SMARCE1-209ENST00000478349 PHF12Q96QT6 1004 aa13.98□□□□□ -0.17
SMARCE1-209ENST00000478349 TXLNGQ9NUQ3 528 aa13.98□□□□□ -0.17
SMARCE1-209ENST00000478349 NDOR1Q9UHB4 597 aa13.98□□□□□ -0.17
SMARCE1-209ENST00000478349 PACSIN2Q9UNF0 486 aaPredicted RBP13.98□□□□□ -0.17
SMARCE1-209ENST00000478349 ZNF148Q9UQR1 794 aa13.98□□□□□ -0.17
SMARCE1-209ENST00000478349 TDRKHQ9Y2W6 561 aaKnown RBP13.98□□□□□ -0.17
SMARCE1-209ENST00000478349 PEX12O00623 359 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 DDX3YO15523 660 aaKnown RBP13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 ZSCAN9O15535 394 aaPredicted RBP13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 ZNF749O43361 778 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 KRT86O43790 486 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 APOA4P06727 396 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 CHRM5P08912 532 aaPredicted RBP13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 UGT2B7P16662 529 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 ADRA1DP25100 572 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 FOXN2P32314 431 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 CDKN1CP49918 316 aaPredicted RBP13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 GDF10P55107 478 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 SLC5A12Q1EHB4 618 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 FASTKD1Q53R41 847 aaKnown RBP13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 CPZQ66K79 652 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 TLDC1Q6P9B6 456 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 TTC23LQ6PF05 361 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 FAM198BQ6UWH4 519 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 CDHR3Q6ZTQ4 885 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 RAB42Q8N4Z0 105 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 SLC38A9Q8NBW4 561 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 CLEC1AQ8NC01 280 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 GALNT11Q8NCW6 608 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 PPHLN1Q8NEY8 458 aaKnown RBP13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 OR52K1Q8NGK4 314 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 OR5AR1Q8NGP9 310 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 ASZ1Q8WWH4 475 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 DLG3Q92796 817 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 FER1L6-AS2Q96M78 137 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 RANBP9Q96S59 729 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 RUFY1Q96T51 708 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 RAB11FIP5Q9BXF6 653 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 AP1M1Q9BXS5 423 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 TRIM55Q9BYV6 548 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 SLC29A3Q9BZD2 475 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 XKR8Q9H6D3 395 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 AKIRIN1Q9H9L7 192 aaPredicted RBP13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 INTS7Q9NVH2 962 aaKnown RBP13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 GPR83Q9NYM4 423 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 ICKQ9UPZ9 632 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 PLAAQ9Y263 795 aa13.97□□□□□ -0.17
SMARCE1-209ENST00000478349 MAST4O15021 2626 aa13.96□□□□□ -0.17
SMARCE1-209ENST00000478349 LIASO43766 372 aa13.96□□□□□ -0.17
SMARCE1-209ENST00000478349 SUN1O94901 812 aa13.96□□□□□ -0.17
SMARCE1-209ENST00000478349 PVRP15151 417 aa13.96□□□□□ -0.17
SMARCE1-209ENST00000478349 FOLR3P41439 243 aa13.96□□□□□ -0.17
SMARCE1-209ENST00000478349 RAB28P51157 221 aa13.96□□□□□ -0.17
SMARCE1-209ENST00000478349 CHAF1BQ13112 559 aa13.96□□□□□ -0.17
SMARCE1-209ENST00000478349 PTCHD3Q3KNS1 767 aa13.96□□□□□ -0.17
SMARCE1-209ENST00000478349 ZNF789Q5FWF6 425 aa13.96□□□□□ -0.17
SMARCE1-209ENST00000478349 TSTD2Q5T7W7 516 aa13.96□□□□□ -0.17
SMARCE1-209ENST00000478349 RHBDD2Q6NTF9 364 aa13.96□□□□□ -0.17
SMARCE1-209ENST00000478349 C4orf22Q6V702 233 aa13.96□□□□□ -0.17
SMARCE1-209ENST00000478349 UNC5AQ6ZN44 842 aa13.96□□□□□ -0.17
SMARCE1-209ENST00000478349 TAB3Q8N5C8 712 aaPredicted RBP13.96□□□□□ -0.17
SMARCE1-209ENST00000478349 OR6P1Q8NGX9 317 aa13.96□□□□□ -0.17
SMARCE1-209ENST00000478349 OR4L1Q8NH43 312 aa13.96□□□□□ -0.17
SMARCE1-209ENST00000478349 CPT1CQ8TCG5 803 aa13.96□□□□□ -0.17
SMARCE1-209ENST00000478349 ADAMTS17Q8TE56 1095 aa13.96□□□□□ -0.17
SMARCE1-209ENST00000478349 TM9SF4Q92544 642 aa13.96□□□□□ -0.17
SMARCE1-209ENST00000478349 NDC1Q9BTX1 674 aa13.96□□□□□ -0.17
SMARCE1-209ENST00000478349 KLHL25Q9H0H3 589 aa13.96□□□□□ -0.17
SMARCE1-209ENST00000478349 MLXIPLQ9NP71 852 aa13.96□□□□□ -0.17
SMARCE1-209ENST00000478349 PIH1D1Q9NWS0 290 aaKnown RBP13.96□□□□□ -0.17
SMARCE1-209ENST00000478349 PAK5Q9P286 719 aa13.96□□□□□ -0.17
SMARCE1-209ENST00000478349 R3HDM2Q9Y2K5 976 aaKnown RBP13.96□□□□□ -0.17
SMARCE1-209ENST00000478349 PTPN13Q12923 2485 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 SLC5A10A0PJK1 596 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 CCDC162PA2VCL2 907 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 ISM1B1AKI9 464 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 KPNA5O15131 536 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 PFDN6O15212 129 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 CEACAM4O75871 244 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 IPO13O94829 963 aaKnown RBP13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 FKBP9O95302 570 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 GOT2P00505 430 aaKnown RBP13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 PIM1P11309 404 aaPredicted RBP13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 ACADLP28330 430 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 CDC25BP30305 580 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 TTPAP49638 278 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 MLLT10P55197 1068 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 DCDP81605 110 aaKnown RBP13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 BRD3Q15059 726 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 CCDC38Q502W7 563 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 VWA5B1Q5TIE3 1220 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 PRAMEF17Q5VTA0 474 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 UNC5DQ6UXZ4 953 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 DCUN1D3Q8IWE4 304 aa13.95□□□□□ -0.18
SMARCE1-209ENST00000478349 SLC22A15Q8IZD6 547 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms