RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 KDM1AO60341 852 aa21.06■□□□□ 0.96
COL9A3-211ENST00000477612 NDUFS3O75489 264 aa21.06■□□□□ 0.96
COL9A3-211ENST00000477612 APOA4P06727 396 aa21.06■□□□□ 0.96
COL9A3-211ENST00000477612 DLSTP36957 453 aa21.06■□□□□ 0.96
COL9A3-211ENST00000477612 GPR19Q15760 415 aa21.06■□□□□ 0.96
COL9A3-211ENST00000477612 KYNUQ16719 465 aa21.06■□□□□ 0.96
COL9A3-211ENST00000477612 MRNIPQ6NTE8 343 aa21.06■□□□□ 0.96
COL9A3-211ENST00000477612 ZNF517Q6ZMY9 492 aaPredicted RBP21.06■□□□□ 0.96
COL9A3-211ENST00000477612 SDCCAG8Q86SQ7 713 aaPredicted RBP21.06■□□□□ 0.96
COL9A3-211ENST00000477612 TMEM135Q86UB9 458 aa21.06■□□□□ 0.96
COL9A3-211ENST00000477612 KRT222Q8N1A0 295 aa21.06■□□□□ 0.96
COL9A3-211ENST00000477612 NAT8LQ8N9F0 302 aa21.06■□□□□ 0.96
COL9A3-211ENST00000477612 STARD8Q92502 1023 aa21.06■□□□□ 0.96
COL9A3-211ENST00000477612 LRFN5Q96NI6 719 aa21.06■□□□□ 0.96
COL9A3-211ENST00000477612 BIRC8Q96P09 236 aa21.06■□□□□ 0.96
COL9A3-211ENST00000477612 SERPINB12Q96P63 405 aa21.06■□□□□ 0.96
COL9A3-211ENST00000477612 ARHGAP9Q9BRR9 750 aa21.06■□□□□ 0.96
COL9A3-211ENST00000477612 MENTQ9BUN1 341 aa21.06■□□□□ 0.96
COL9A3-211ENST00000477612 SOHLH2Q9NX45 425 aa21.06■□□□□ 0.96
COL9A3-211ENST00000477612 CROTQ9UKG9 612 aa21.06■□□□□ 0.96
COL9A3-211ENST00000477612 SDR42E2A6NKP2 422 aa21.05■□□□□ 0.96
COL9A3-211ENST00000477612 ZNF185O15231 689 aa21.05■□□□□ 0.96
COL9A3-211ENST00000477612 CHRM5P08912 532 aaPredicted RBP21.05■□□□□ 0.96
COL9A3-211ENST00000477612 SFTPCP11686 197 aa21.05■□□□□ 0.96
COL9A3-211ENST00000477612 TCP1P17987 556 aaKnown RBP21.05■□□□□ 0.96
COL9A3-211ENST00000477612 OGNP20774 298 aaKnown RBP21.05■□□□□ 0.96
COL9A3-211ENST00000477612 RNF187Q5TA31 235 aaPredicted RBP21.05■□□□□ 0.96
COL9A3-211ENST00000477612 PTRHD1Q6GMV3 140 aaKnown RBP21.05■□□□□ 0.96
COL9A3-211ENST00000477612 BORAQ6PGQ7 559 aa21.05■□□□□ 0.96
COL9A3-211ENST00000477612 SPESP1Q6UW49 350 aa21.05■□□□□ 0.96
COL9A3-211ENST00000477612 UNC5DQ6UXZ4 953 aa21.05■□□□□ 0.96
COL9A3-211ENST00000477612 LPGAT1Q92604 370 aa21.05■□□□□ 0.96
COL9A3-211ENST00000477612 OR2A14Q96R47 310 aa21.05■□□□□ 0.96
COL9A3-211ENST00000477612 KCND3Q9UK17 655 aa21.05■□□□□ 0.96
COL9A3-211ENST00000477612 PCDHB3Q9Y5E6 796 aa21.05■□□□□ 0.96
COL9A3-211ENST00000477612 BOD1L1Q8NFC6 3051 aa21.05■□□□□ 0.96
COL9A3-211ENST00000477612 BAHCC1Q9P281 2608 aa21.05■□□□□ 0.96
COL9A3-211ENST00000477612 GOLGA6L10A0A0M3HER8 536 aa21.04■□□□□ 0.96
COL9A3-211ENST00000477612 C21orf140B9A014 251 aa21.04■□□□□ 0.96
COL9A3-211ENST00000477612 PFDN6O15212 129 aa21.04■□□□□ 0.96
COL9A3-211ENST00000477612 CPNE3O75131 537 aaKnown RBP21.04■□□□□ 0.96
COL9A3-211ENST00000477612 SCRG1O75711 98 aa21.04■□□□□ 0.96
COL9A3-211ENST00000477612 NTRK1P04629 796 aa21.04■□□□□ 0.96
COL9A3-211ENST00000477612 RPN2P04844 631 aa21.04■□□□□ 0.96
COL9A3-211ENST00000477612 PAMP19021 973 aa21.04■□□□□ 0.96
COL9A3-211ENST00000477612 TERF1P54274 439 aa21.04■□□□□ 0.96
COL9A3-211ENST00000477612 CSE1LP55060 971 aaKnown RBP21.04■□□□□ 0.96
COL9A3-211ENST00000477612 CDC20Q12834 499 aa21.04■□□□□ 0.96
COL9A3-211ENST00000477612 GRB7Q14451 532 aa21.04■□□□□ 0.96
COL9A3-211ENST00000477612 ZNF789Q5FWF6 425 aa21.04■□□□□ 0.96
COL9A3-211ENST00000477612 CTSL3PQ5NE16 218 aa21.04■□□□□ 0.96
COL9A3-211ENST00000477612 PLEKHS1Q5SXH7 462 aa21.04■□□□□ 0.96
COL9A3-211ENST00000477612 SLCO2A1Q92959 643 aa21.04■□□□□ 0.96
COL9A3-211ENST00000477612 FAM117AQ9C073 453 aa21.04■□□□□ 0.96
COL9A3-211ENST00000477612 ADNPQ9H2P0 1102 aa21.04■□□□□ 0.96
COL9A3-211ENST00000477612 FANCEQ9HB96 536 aa21.04■□□□□ 0.96
COL9A3-211ENST00000477612 GEMIN8Q9NWZ8 242 aaKnown RBP21.04■□□□□ 0.96
COL9A3-211ENST00000477612 TDRKHQ9Y2W6 561 aaKnown RBP21.04■□□□□ 0.96
COL9A3-211ENST00000477612 ESR1P03372 595 aa21.03■□□□□ 0.96
COL9A3-211ENST00000477612 UGT2B7P16662 529 aa21.03■□□□□ 0.96
COL9A3-211ENST00000477612 TCN2P20062 427 aa21.03■□□□□ 0.96
COL9A3-211ENST00000477612 OAS2P29728 719 aaKnown RBP21.03■□□□□ 0.96
COL9A3-211ENST00000477612 RAB28P51157 221 aa21.03■□□□□ 0.96
COL9A3-211ENST00000477612 GBX1Q14549 363 aa21.03■□□□□ 0.96
COL9A3-211ENST00000477612 TMED2Q15363 201 aa21.03■□□□□ 0.96
COL9A3-211ENST00000477612 ANKRD20A4Q4UJ75 823 aa21.03■□□□□ 0.96
COL9A3-211ENST00000477612 CILP2Q8IUL8 1156 aa21.03■□□□□ 0.96
COL9A3-211ENST00000477612 DCUN1D3Q8IWE4 304 aa21.03■□□□□ 0.96
COL9A3-211ENST00000477612 RNF31Q96EP0 1072 aa21.03■□□□□ 0.96
COL9A3-211ENST00000477612 SIGLEC10Q96LC7 697 aa21.03■□□□□ 0.96
COL9A3-211ENST00000477612 AKIRIN1Q9H9L7 192 aaPredicted RBP21.03■□□□□ 0.96
COL9A3-211ENST00000477612 SPHK1Q9NYA1 384 aa21.03■□□□□ 0.96
COL9A3-211ENST00000477612 SAMD15Q9P1V8 674 aa21.03■□□□□ 0.96
COL9A3-211ENST00000477612 MRPS18BQ9Y676 258 aaKnown RBP21.03■□□□□ 0.96
COL9A3-211ENST00000477612 FER1L5A0AVI2 2057 aa21.03■□□□□ 0.96
COL9A3-211ENST00000477612 ZCWPW2A0A1B0GU75 182 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 USP27XA6NNY8 438 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 B8ZZF3 427 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 GOLGA8KD6RF30 607 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 H3BMM5 538 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 GOLGA8TH3BQL2 631 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 MAP3K7O43318 606 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 PVRP15151 417 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 PEBP1P30086 187 aaKnown RBP21.02■□□□□ 0.96
COL9A3-211ENST00000477612 PKLRP30613 574 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 GABRA4P48169 554 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 EIF3BP55884 814 aaKnown RBP21.02■□□□□ 0.96
COL9A3-211ENST00000477612 ABRQ12979 859 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 DNASE1L3Q13609 305 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 DHX34Q14147 1143 aaKnown RBP21.02■□□□□ 0.96
COL9A3-211ENST00000477612 KIR2DS3Q14952 304 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 SLC5A12Q1EHB4 618 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 PAPD7Q5XG87 772 aaKnown RBP21.02■□□□□ 0.96
COL9A3-211ENST00000477612 NEPROQ6NW34 567 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 CDHR3Q6ZTQ4 885 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 CENPUQ71F23 418 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 OTOAQ7RTW8 1153 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 TMEM126BQ8IUX1 230 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 PPIL6Q8IXY8 311 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 AGGF1Q8N302 714 aaeCLIP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms