RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 MYL12BO14950 172 aa14.33□□□□□ -0.12
HDAC6-220ENST00000477528 ANGPTL1O95841 491 aa14.33□□□□□ -0.12
HDAC6-220ENST00000477528 PGRP06401 933 aa14.33□□□□□ -0.12
HDAC6-220ENST00000477528 CDK9P50750 372 aaKnown RBP14.33□□□□□ -0.12
HDAC6-220ENST00000477528 ZNF614Q8N883 585 aa14.33□□□□□ -0.12
HDAC6-220ENST00000477528 ING5Q8WYH8 240 aa14.33□□□□□ -0.12
HDAC6-220ENST00000477528 FERD3LQ96RJ6 166 aa14.33□□□□□ -0.12
HDAC6-220ENST00000477528 ZNF607Q96SK3 696 aa14.33□□□□□ -0.12
HDAC6-220ENST00000477528 CCDC3Q9BQI4 270 aa14.33□□□□□ -0.12
HDAC6-220ENST00000477528 DUSP26Q9BV47 211 aa14.33□□□□□ -0.12
HDAC6-220ENST00000477528 YTHDF1Q9BYJ9 559 aaKnown RBP14.33□□□□□ -0.12
HDAC6-220ENST00000477528 RERGLQ9H628 205 aa14.33□□□□□ -0.12
HDAC6-220ENST00000477528 ARMC7Q9H6L4 198 aa14.33□□□□□ -0.12
HDAC6-220ENST00000477528 VPS29Q9UBQ0 182 aa14.33□□□□□ -0.12
HDAC6-220ENST00000477528 C2orf78A6NCI8 922 aa14.33□□□□□ -0.12
HDAC6-220ENST00000477528 ACRP10323 421 aa14.33□□□□□ -0.12
HDAC6-220ENST00000477528 ZNF10P21506 573 aaPredicted RBP14.33□□□□□ -0.12
HDAC6-220ENST00000477528 CST5P28325 142 aaPredicted RBP14.33□□□□□ -0.12
HDAC6-220ENST00000477528 VIPR1P32241 457 aa14.33□□□□□ -0.12
HDAC6-220ENST00000477528 MRPS15P82914 257 aaKnown RBP14.33□□□□□ -0.12
HDAC6-220ENST00000477528 NCEH1Q6PIU2 408 aa14.33□□□□□ -0.12
HDAC6-220ENST00000477528 KCTD8Q6ZWB6 473 aa14.33□□□□□ -0.12
HDAC6-220ENST00000477528 RIOK2Q9BVS4 552 aaKnown RBP14.33□□□□□ -0.12
HDAC6-220ENST00000477528 GSTO2Q9H4Y5 243 aa14.33□□□□□ -0.12
HDAC6-220ENST00000477528 RWDD3Q9Y3V2 267 aa14.33□□□□□ -0.12
HDAC6-220ENST00000477528 PITPNM1O00562 1244 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 LDB2O43679 373 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 MYL12AP19105 171 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 HMGCLP35914 325 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 LSM3P62310 102 aaKnown RBP14.32□□□□□ -0.12
HDAC6-220ENST00000477528 PPIGQ13427 754 aaKnown RBP eCLIP14.32□□□□□ -0.123e-7■■■□□ 16.1
HDAC6-220ENST00000477528 TEAD4Q15561 434 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 RGS21Q2M5E4 152 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 ARSIQ5FYB1 569 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 MARVELD2Q8N4S9 558 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 BEND7Q8N7W2 519 aaPredicted RBP14.32□□□□□ -0.12
HDAC6-220ENST00000477528 USP7Q93009 1102 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 TRIB3Q96RU7 358 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 SLC22A14Q9Y267 594 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 RNF11Q9Y3C5 154 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 WNT9AO14904 365 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 TRIM24O15164 1050 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 GABBR2O75899 941 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 RPS6KA3P51812 740 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 COQ5Q5HYK3 327 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 BLOC1S3Q6QNY0 202 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 GALNT7Q86SF2 657 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 AMER2Q8N7J2 671 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 BORCS5Q969J3 196 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 SLC39A13Q96H72 371 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 FANCEQ9HB96 536 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 GPSM3Q9Y4H4 160 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 PTGDR2Q9Y5Y4 395 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 LOC285095A0A1B0GVY8 99 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 MTX2O75431 263 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 MYCLP1P12525 358 aaPredicted RBP14.32□□□□□ -0.12
HDAC6-220ENST00000477528 RFC2P35250 354 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 HNF1BP35680 557 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 DSC3Q14574 896 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 NR1D2Q14995 579 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 TJAP1Q5JTD0 557 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 NANOGP8Q6NSW7 305 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 SLC15A3Q8IY34 581 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 CDK20Q8IZL9 346 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 ZHX1-C8orf76Q96EF9 292 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 SLC45A3Q96JT2 553 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 ZNF514Q96K75 400 aaPredicted RBP14.32□□□□□ -0.12
HDAC6-220ENST00000477528 NANOGQ9H9S0 305 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 CCM2LQ9NUG4 571 aaPredicted RBP14.32□□□□□ -0.12
HDAC6-220ENST00000477528 SLC9A8Q9Y2E8 581 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 LOC100506127A0A0U1RQW1 187 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 LEFTY2O00292 366 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 HTRA2O43464 458 aaPredicted RBP14.32□□□□□ -0.12
HDAC6-220ENST00000477528 FGF4P08620 206 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 ARCN1P48444 511 aaKnown RBP14.32□□□□□ -0.12
HDAC6-220ENST00000477528 NRG4Q8WWG1 115 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 TMBIM1Q969X1 311 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 PTERQ96BW5 349 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 LRCH3Q96II8 777 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 NODALQ96S42 347 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 SPO11Q9Y5K1 396 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 EVPLQ92817 2033 aa14.32□□□□□ -0.12
HDAC6-220ENST00000477528 ARHGEF9O43307 516 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 GKP32189 559 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 SP140Q13342 867 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 PTCHD3Q3KNS1 767 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 SPANXN4Q5MJ08 99 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 TYW3Q6IPR3 259 aaKnown RBP14.31□□□□□ -0.12
HDAC6-220ENST00000477528 KIAA2013Q8IYS2 634 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 OR13J1Q8NGT2 312 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 CREBZFQ9NS37 354 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 ZNF282Q9UDV7 671 aaPredicted RBP14.31□□□□□ -0.12
HDAC6-220ENST00000477528 IL36AQ9UHA7 158 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 OARD1Q9Y530 152 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 HMX2A2RU54 273 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 TNFRSF11BO00300 401 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 ADAMDEC1O15204 470 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 RGS10O43665 173 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 ADAMTS4O75173 837 aa14.31□□□□□ -0.12
HDAC6-220ENST00000477528 PRKD3O94806 890 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms