RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 OLAHQ9NV23 265 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 PLAGL1Q9UM63 463 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 LUC7L2Q9Y383 392 aaKnown RBP6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 C2CD3Q4AC94 2353 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 CPAMD8Q8IZJ3 1885 aa6.45□□□□□ -1.38
RTFDC1-206ENST00000477485 C3orf70A6NLC5 250 aaPredicted RBP6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 ZNF487B1APH4 448 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 H7C0C1 242 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 GAPDHSO14556 408 aaPredicted RBP6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 AKR1B10O60218 316 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 JRKO75564 520 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 CRTAMO95727 393 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 MBD3O95983 291 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 CTSBP07858 339 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 UMODP07911 640 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 ATP1B2P14415 290 aaPredicted RBP6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 PDHA2P29803 388 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 MC4RP32245 332 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 SHMT2P34897 504 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 ATP5OP48047 213 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 GEMP55040 296 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 CSE1LP55060 971 aaKnown RBP6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 UBASH3AP57075 661 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 ARG2P78540 354 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 FANCCQ00597 558 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 WASHC5Q12768 1159 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 OLIG2Q13516 323 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 BOP1Q14137 746 aaKnown RBP6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 TFDP2Q14188 446 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 TAF1AQ15573 450 aaPredicted RBP6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 RBBP7Q16576 425 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 TUBB8Q3ZCM7 444 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 SYTL3Q4VX76 610 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 PRAMEF13Q5VWM6 474 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 ZNF385CQ66K41 422 aaPredicted RBP6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 RHBDD2Q6NTF9 364 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 TLDC1Q6P9B6 456 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 MFSD7Q6UXD7 560 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 TTLL10Q6ZVT0 673 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 GDF7Q7Z4P5 450 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 TAX1BP1Q86VP1 789 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 TMEM151BQ8IW70 566 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 ADGRF3Q8IZF5 1079 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 OR5AR1Q8NGP9 310 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 OR1N1Q8NGS0 311 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 OR13C4Q8NGS5 318 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 SLC35G2Q8TBE7 412 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 PROKR1Q8TCW9 393 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 DTX3LQ8TDB6 740 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 FAR1Q8WVX9 515 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 TFGQ92734 400 aaPredicted RBP6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 FCRL5Q96RD9 977 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 BPIFA3Q9BQP9 254 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 PITPNM3Q9BZ71 974 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 MVB12BQ9H7P6 319 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 DDX56Q9NY93 547 aaKnown RBP6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 SUCOQ9UBS9 1254 aaKnown RBP6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 CAPN11Q9UMQ6 739 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 ICKQ9UPZ9 632 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 ASF1AQ9Y294 204 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 CNTRLQ7Z7A1 2325 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 CSMD1Q96PZ7 3565 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 APCP25054 2843 aa6.44□□□□□ -1.38
RTFDC1-206ENST00000477485 TRGV8A0A0C4DH27 118 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 A0A0J9YY10 115 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 CCDC78A2IDD5 438 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 HEATR9A2RTY3 570 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 C5orf60A6NFR6 353 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 GOLGA6L19H0YKK7 550 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 E2F3O00716 465 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 HCRTR1O43613 425 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 KDM1AO60341 852 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 CNOT3O75175 753 aaKnown RBP6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 ANXA9O76027 345 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 F10P00742 488 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 EPOP01588 193 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 GYPCP04921 128 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 CHRM5P08912 532 aaPredicted RBP6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 TMEM253P0C7T8 217 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 MSL3P1P0C860 447 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 PIM1P11309 404 aaPredicted RBP6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 COX6B1P14854 86 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 CTNNA2P26232 953 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 TSFMP43897 325 aaKnown RBP6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 NR2C2P49116 596 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 CDKN1CP49918 316 aaPredicted RBP6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 KCNK10P57789 538 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 PRPSAP1Q14558 356 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 TLR1Q15399 786 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 ZIC1Q15915 447 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 SLC18A3Q16572 532 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 ITPRIPL1Q6GPH6 555 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 GFRALQ6UXV0 394 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 NAPRTQ6XQN6 538 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 UNC5AQ6ZN44 842 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 MICALCLQ6ZW33 695 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 SNX20Q7Z614 316 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 FAM20CQ8IXL6 584 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 PRSS58Q8IYP2 241 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms