RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 ZNF483Q8TF39 744 aaPredicted RBP10.8□□□□□ -0.68
COL27A1-204ENST00000477421 PHF10Q8WUB8 498 aaKnown RBP10.8□□□□□ -0.68
COL27A1-204ENST00000477421 PAWRQ96IZ0 340 aaKnown RBP10.8□□□□□ -0.68
COL27A1-204ENST00000477421 GIMAP4Q9NUV9 329 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 SLAMF8Q9P0V8 285 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 RPS6KA6Q9UK32 745 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 IKZF3Q9UKT9 509 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 SLC9A3R1O14745 358 aaPredicted RBP10.79□□□□□ -0.68
COL27A1-204ENST00000477421 TNFRSF10BO14763 440 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 SERPINI2O75830 405 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 PGLSO95336 258 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 SEC24AO95486 1093 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 HOXD8P13378 290 aaPredicted RBP10.79□□□□□ -0.68
COL27A1-204ENST00000477421 IL7RP16871 459 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 ATF6P18850 670 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 CAPGP40121 348 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 ERVPABLB-1P60509 514 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 NAA20P61599 178 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 FAM189BP81408 668 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 MYLK3Q32MK0 819 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 INO80DQ53TQ3 878 aaPredicted RBP10.79□□□□□ -0.68
COL27A1-204ENST00000477421 CARD16Q5EG05 197 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 PAGE3Q5JUK9 113 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 TYW3Q6IPR3 259 aaKnown RBP10.79□□□□□ -0.68
COL27A1-204ENST00000477421 CAPN13Q6MZZ7 669 aaPredicted RBP10.79□□□□□ -0.68
COL27A1-204ENST00000477421 MAMSTRQ6ZN01 415 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 AHSA2Q719I0 299 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 CLEC14AQ86T13 490 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 ZNF605Q86T29 641 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 NXPE1Q8N323 547 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 OR5AK3PQ8NH89 298 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 PROX1Q92786 737 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 OSBPL6Q9BZF3 934 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 NOL6Q9H6R4 1146 aaKnown RBP10.79□□□□□ -0.68
COL27A1-204ENST00000477421 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.79□□□□□ -0.68
COL27A1-204ENST00000477421 ZDHHC3Q9NYG2 299 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 SBF2Q86WG5 1849 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 ANGPTL1O95841 491 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 KLKB1P03952 638 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 SOD2P04179 222 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 TYRP14679 529 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 MAT2AP31153 395 aaKnown RBP10.79□□□□□ -0.68
COL27A1-204ENST00000477421 MEF2AQ02078 507 aaPredicted RBP10.79□□□□□ -0.68
COL27A1-204ENST00000477421 GPR153Q6NV75 609 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 LETMD1Q6P1Q0 360 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 SUSD1Q6UWL2 747 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 TPRG1Q6ZUI0 275 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 AADATQ8N5Z0 425 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 XAGE5Q8WWM1 108 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 VPS35Q96QK1 796 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 TEX12Q9BXU0 123 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 NLNQ9BYT8 704 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 EPB41L1Q9H4G0 881 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 TLR9Q9NR96 1032 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 FGF18O76093 207 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 RAP2AP10114 183 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 CD70P32970 193 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 ACADVLP49748 655 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 TEAD2Q15562 447 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 GPR33Q49SQ1 333 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 GTDC1Q4AE62 458 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 ATP13A5Q4VNC0 1218 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 RHEBL1Q8TAI7 183 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 SLC39A13Q96H72 371 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 RAD21L1Q9H4I0 556 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 SLC32A1Q9H598 525 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 ATAD3AQ9NVI7 634 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 H2AFY2Q9P0M6 372 aaPredicted RBP10.79□□□□□ -0.68
COL27A1-204ENST00000477421 GPSM3Q9Y4H4 160 aa10.79□□□□□ -0.68
COL27A1-204ENST00000477421 BCKDKO14874 412 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 SGTAO43765 313 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 TPST2O60704 377 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 IL6P05231 212 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 CHRM5P08912 532 aaPredicted RBP10.78□□□□□ -0.68
COL27A1-204ENST00000477421 CD1EP15812 388 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 SYN1P17600 705 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 PPP2R1BP30154 601 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 SERPINB1P30740 379 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 ADRA1AP35348 466 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 PCYT1AP49585 367 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 DGKGP49619 791 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 MANFP55145 182 aaKnown RBP10.78□□□□□ -0.68
COL27A1-204ENST00000477421 TJAP1Q5JTD0 557 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 FRG2Q64ET8 278 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 GDPD4Q6W3E5 623 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 AHI1Q8N157 1196 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 C1orf52Q8N6N3 182 aaKnown RBP10.78□□□□□ -0.68
COL27A1-204ENST00000477421 EXOSC8Q96B26 276 aaKnown RBP10.78□□□□□ -0.68
COL27A1-204ENST00000477421 REPS1Q96D71 796 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 FRG2BQ96QU4 278 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 TSEN34Q9BSV6 310 aaKnown RBP10.78□□□□□ -0.68
COL27A1-204ENST00000477421 COQ6Q9Y2Z9 468 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 DOCK3Q8IZD9 2030 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 MAGEB17A8MXT2 336 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 CLIC1O00299 241 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 SOCS2O14508 198 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 ATXN1LP0C7T5 689 aaKnown RBP10.78□□□□□ -0.68
COL27A1-204ENST00000477421 OCM2P0CE71 109 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 OCMP0CE72 109 aaPredicted RBP10.78□□□□□ -0.68
COL27A1-204ENST00000477421 HMGCLP35914 325 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms