RNA–Protein interactions for RNA: ENST00000476466.1

SLC6A8-209, Transcript of solute carrier family 6 member 8, humanhuman

TSL 3

Gene SLC6A8, Length 470 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-209ENST00000476466 IL17FQ96PD4 163 aa13.66□□□□□ -0.22
SLC6A8-209ENST00000476466 TRAPPC9Q96Q05 1148 aa13.66□□□□□ -0.22
SLC6A8-209ENST00000476466 OR2A14Q96R47 310 aa13.66□□□□□ -0.22
SLC6A8-209ENST00000476466 TUBB2BQ9BVA1 445 aa13.66□□□□□ -0.22
SLC6A8-209ENST00000476466 LHX9Q9NQ69 397 aa13.66□□□□□ -0.22
SLC6A8-209ENST00000476466 C1GALT1Q9NS00 363 aa13.66□□□□□ -0.22
SLC6A8-209ENST00000476466 HOMER3Q9NSC5 361 aa13.66□□□□□ -0.22
SLC6A8-209ENST00000476466 SOHLH2Q9NX45 425 aa13.66□□□□□ -0.22
SLC6A8-209ENST00000476466 BFARQ9NZS9 450 aa13.66□□□□□ -0.22
SLC6A8-209ENST00000476466 GALPQ9UBC7 116 aa13.66□□□□□ -0.22
SLC6A8-209ENST00000476466 TDRKHQ9Y2W6 561 aaKnown RBP13.66□□□□□ -0.22
SLC6A8-209ENST00000476466 NFS1Q9Y697 457 aa13.66□□□□□ -0.22
SLC6A8-209ENST00000476466 PCSK5Q92824 1860 aa13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 ZNF891A8MT65 544 aaPredicted RBP13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 H3BMH7 237 aa13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 PYCARD-AS1I3L0S3 204 aa13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 NIPSNAP2O75323 286 aa13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 BANF1O75531 89 aa13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 SLCO2B1O94956 709 aa13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 CHRM5P08912 532 aaPredicted RBP13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 PLA2G2AP14555 144 aa13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 PKLRP30613 574 aa13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 GABRA4P48169 554 aa13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 TTPAP49638 278 aa13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 ACY1Q03154 408 aa13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 C19orf57Q0VDD7 668 aa13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 PRKAA1Q13131 559 aa13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 CCSMST1Q4G0I0 132 aa13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 AARS2Q5JTZ9 985 aaKnown RBP13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 KIAA0930Q6ICG6 404 aaPredicted RBP13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 ARMC6Q6NXE6 501 aa13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 SPESP1Q6UW49 350 aa13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 TBC1D21Q8IYX1 336 aa13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 NAT8LQ8N9F0 302 aa13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 ZSCAN1Q8NBB4 408 aa13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 ACTRT1Q8TDG2 376 aa13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 CARD6Q9BX69 1037 aa13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 TRIT1Q9H3H1 467 aaKnown RBP13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 PDE7BQ9NP56 450 aa13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 TSR3Q9UJK0 312 aaKnown RBP13.65□□□□□ -0.22
SLC6A8-209ENST00000476466 ZCWPW2A0A1B0GU75 182 aa13.64□□□□□ -0.23
SLC6A8-209ENST00000476466 SCRG1O75711 98 aa13.64□□□□□ -0.23
SLC6A8-209ENST00000476466 RPS3P23396 243 aaKnown RBP eCLIP13.64□□□□□ -0.234e-6■□□□□ 10.6
SLC6A8-209ENST00000476466 BDKRB1P46663 353 aa13.64□□□□□ -0.23
SLC6A8-209ENST00000476466 EIF3BP55884 814 aaKnown RBP13.64□□□□□ -0.23
SLC6A8-209ENST00000476466 GBX1Q14549 363 aa13.64□□□□□ -0.23
SLC6A8-209ENST00000476466 ZNF517Q6ZMY9 492 aaPredicted RBP13.64□□□□□ -0.23
SLC6A8-209ENST00000476466 CENPUQ71F23 418 aa13.64□□□□□ -0.23
SLC6A8-209ENST00000476466 TAX1BP1Q86VP1 789 aa13.64□□□□□ -0.23
SLC6A8-209ENST00000476466 TMEM151BQ8IW70 566 aa13.64□□□□□ -0.23
SLC6A8-209ENST00000476466 CARFQ8N187 725 aa13.64□□□□□ -0.23
SLC6A8-209ENST00000476466 C2orf73Q8N5S3 287 aaPredicted RBP13.64□□□□□ -0.23
SLC6A8-209ENST00000476466 CFAP61Q8NHU2 1237 aa13.64□□□□□ -0.23
SLC6A8-209ENST00000476466 KIAA1143Q96AT1 154 aaPredicted RBP13.64□□□□□ -0.23
SLC6A8-209ENST00000476466 SLC30A3Q99726 388 aa13.64□□□□□ -0.23
SLC6A8-209ENST00000476466 DDX47Q9H0S4 455 aaKnown RBP13.64□□□□□ -0.23
SLC6A8-209ENST00000476466 STARD5Q9NSY2 213 aa13.64□□□□□ -0.23
SLC6A8-209ENST00000476466 KLHL20Q9Y2M5 609 aa13.64□□□□□ -0.23
SLC6A8-209ENST00000476466 MED16Q9Y2X0 877 aa13.64□□□□□ -0.23
SLC6A8-209ENST00000476466 PIPSLA2A3N6 862 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 C2orf74A8MZ97 194 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 TMEM150CB9EJG8 249 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 MATN2O00339 956 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 CAPN1P07384 714 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 FMO4P31512 558 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 SHMT2P34897 504 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 RORAP35398 523 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 FNTAP49354 379 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 ARL4DP49703 201 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 POLE2P56282 527 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 NFATC3Q12968 1075 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 DNASE1L3Q13609 305 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 IL10RAQ13651 578 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 DEFB109BQ30KR1 87 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 ANKRD20A4Q4UJ75 823 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 PLEKHS1Q5SXH7 462 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 RNASEH2BQ5TBB1 312 aaKnown RBP13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 C16orf46Q6P387 395 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 BORAQ6PGQ7 559 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 CILP2Q8IUL8 1156 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 TMEM126BQ8IUX1 230 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 DENND6AQ8IWF6 608 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 OTUD6BQ8N6M0 293 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 C19orf47Q8N9M1 422 aaKnown RBP13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 MCUQ8NE86 351 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 GIMAP7Q8NHV1 300 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 ZNF669Q96BR6 464 aaPredicted RBP13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 PLAC1Q9HBJ0 212 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 LATS2Q9NRM7 1088 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 KCND1Q9NSA2 647 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 GNPTGQ9UJJ9 305 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 CRYL1Q9Y2S2 319 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 SEC16AO15027 2179 aa13.63□□□□□ -0.23
SLC6A8-209ENST00000476466 FAM237BA0A1B0GVD1 139 aa13.62□□□□□ -0.23
SLC6A8-209ENST00000476466 ZSCAN12O43309 604 aa13.62□□□□□ -0.23
SLC6A8-209ENST00000476466 NRP2O60462 931 aa13.62□□□□□ -0.23
SLC6A8-209ENST00000476466 CPNE3O75131 537 aaKnown RBP13.62□□□□□ -0.23
SLC6A8-209ENST00000476466 NDUFS3O75489 264 aa13.62□□□□□ -0.23
SLC6A8-209ENST00000476466 MSL3P1P0C860 447 aa13.62□□□□□ -0.23
SLC6A8-209ENST00000476466 TCN2P20062 427 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms