RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 SDCCAG8Q86SQ7 713 aaPredicted RBP20.5■□□□□ 0.87
LIME1-204ENST00000476183 CILP2Q8IUL8 1156 aa20.5■□□□□ 0.87
LIME1-204ENST00000476183 ESX1Q8N693 406 aa20.5■□□□□ 0.87
LIME1-204ENST00000476183 ZSCAN1Q8NBB4 408 aa20.5■□□□□ 0.87
LIME1-204ENST00000476183 ZNF501Q96CX3 271 aaPredicted RBP20.5■□□□□ 0.87
LIME1-204ENST00000476183 WBP1Q96G27 269 aa20.5■□□□□ 0.87
LIME1-204ENST00000476183 TUBB2BQ9BVA1 445 aa20.5■□□□□ 0.87
LIME1-204ENST00000476183 TWSG1Q9GZX9 223 aa20.5■□□□□ 0.87
LIME1-204ENST00000476183 KLHL25Q9H0H3 589 aa20.5■□□□□ 0.87
LIME1-204ENST00000476183 GPN2Q9H9Y4 310 aaPredicted RBP20.5■□□□□ 0.87
LIME1-204ENST00000476183 SOHLH2Q9NX45 425 aa20.5■□□□□ 0.87
LIME1-204ENST00000476183 SPHK1Q9NYA1 384 aa20.5■□□□□ 0.87
LIME1-204ENST00000476183 RPS6KL1Q9Y6S9 549 aa20.5■□□□□ 0.87
LIME1-204ENST00000476183 C1QL1O75973 258 aa20.49■□□□□ 0.87
LIME1-204ENST00000476183 PAMP19021 973 aa20.49■□□□□ 0.87
LIME1-204ENST00000476183 F8A1P23610 371 aa20.49■□□□□ 0.87
LIME1-204ENST00000476183 SHMT2P34897 504 aa20.49■□□□□ 0.87
LIME1-204ENST00000476183 LY6DQ14210 128 aa20.49■□□□□ 0.87
LIME1-204ENST00000476183 LINC00303Q3SY05 128 aa20.49■□□□□ 0.87
LIME1-204ENST00000476183 RNF187Q5TA31 235 aaPredicted RBP20.49■□□□□ 0.87
LIME1-204ENST00000476183 CYB5D1Q6P9G0 228 aa20.49■□□□□ 0.87
LIME1-204ENST00000476183 SPESP1Q6UW49 350 aa20.49■□□□□ 0.87
LIME1-204ENST00000476183 TRIM73Q86UV7 250 aa20.49■□□□□ 0.87
LIME1-204ENST00000476183 CFAP61Q8NHU2 1237 aa20.49■□□□□ 0.87
LIME1-204ENST00000476183 FLVCR1-AS1Q8TAF5 88 aa20.49■□□□□ 0.87
LIME1-204ENST00000476183 EXTL1Q92935 676 aa20.49■□□□□ 0.87
LIME1-204ENST00000476183 SLC45A3Q96JT2 553 aa20.49■□□□□ 0.87
LIME1-204ENST00000476183 TRAPPC9Q96Q05 1148 aa20.49■□□□□ 0.87
LIME1-204ENST00000476183 PANX3Q96QZ0 392 aa20.49■□□□□ 0.87
LIME1-204ENST00000476183 OR2A14Q96R47 310 aa20.49■□□□□ 0.87
LIME1-204ENST00000476183 TCF12Q99081 682 aa20.49■□□□□ 0.87
LIME1-204ENST00000476183 MENTQ9BUN1 341 aa20.49■□□□□ 0.87
LIME1-204ENST00000476183 SEMA4CQ9C0C4 833 aa20.49■□□□□ 0.87
LIME1-204ENST00000476183 ASIC3Q9UHC3 531 aa20.49■□□□□ 0.87
LIME1-204ENST00000476183 CIDEBQ9UHD4 219 aa20.49■□□□□ 0.87
LIME1-204ENST00000476183 CRYL1Q9Y2S2 319 aa20.49■□□□□ 0.87
LIME1-204ENST00000476183 SAR1BQ9Y6B6 198 aa20.49■□□□□ 0.87
LIME1-204ENST00000476183 PIPSLA2A3N6 862 aa20.48■□□□□ 0.87
LIME1-204ENST00000476183 EIF4E1BA6NMX2 242 aaKnown RBP20.48■□□□□ 0.87
LIME1-204ENST00000476183 DNALI1O14645 258 aaPredicted RBP20.48■□□□□ 0.87
LIME1-204ENST00000476183 NIPSNAP2O75323 286 aa20.48■□□□□ 0.87
LIME1-204ENST00000476183 CHRM5P08912 532 aaPredicted RBP20.48■□□□□ 0.87
LIME1-204ENST00000476183 UGT2B7P16662 529 aa20.48■□□□□ 0.87
LIME1-204ENST00000476183 IVDP26440 423 aa20.48■□□□□ 0.87
LIME1-204ENST00000476183 PEBP1P30086 187 aaKnown RBP20.48■□□□□ 0.87
LIME1-204ENST00000476183 GRB7Q14451 532 aa20.48■□□□□ 0.87
LIME1-204ENST00000476183 TMED2Q15363 201 aa20.48■□□□□ 0.87
LIME1-204ENST00000476183 TMTC4Q5T4D3 741 aa20.48■□□□□ 0.87
LIME1-204ENST00000476183 BPHLQ86WA6 291 aaPredicted RBP20.48■□□□□ 0.87
LIME1-204ENST00000476183 KLHL7Q8IXQ5 586 aa20.48■□□□□ 0.87
LIME1-204ENST00000476183 LMNTD1Q8N9Z9 388 aa20.48■□□□□ 0.87
LIME1-204ENST00000476183 KIAA1143Q96AT1 154 aaPredicted RBP20.48■□□□□ 0.87
LIME1-204ENST00000476183 FAM136AQ96C01 138 aa20.48■□□□□ 0.87
LIME1-204ENST00000476183 STAMBPL1Q96FJ0 436 aa20.48■□□□□ 0.87
LIME1-204ENST00000476183 FCRL4Q96PJ5 515 aa20.48■□□□□ 0.87
LIME1-204ENST00000476183 OR6C2Q9NZP2 312 aa20.48■□□□□ 0.87
LIME1-204ENST00000476183 GALPQ9UBC7 116 aa20.48■□□□□ 0.87
LIME1-204ENST00000476183 MAD1L1Q9Y6D9 718 aa20.48■□□□□ 0.87
LIME1-204ENST00000476183 COL6A6A6NMZ7 2263 aa20.48■□□□□ 0.87
LIME1-204ENST00000476183 BOD1L1Q8NFC6 3051 aa20.47■□□□□ 0.87
LIME1-204ENST00000476183 TLN1Q9Y490 2541 aaKnown RBP20.47■□□□□ 0.87
LIME1-204ENST00000476183 CTAGE9A4FU28 777 aa20.47■□□□□ 0.87
LIME1-204ENST00000476183 TERTO14746 1132 aaKnown RBP20.47■□□□□ 0.87
LIME1-204ENST00000476183 NKX2-8O15522 239 aa20.47■□□□□ 0.87
LIME1-204ENST00000476183 USP1O94782 785 aa20.47■□□□□ 0.87
LIME1-204ENST00000476183 S1PR4O95977 384 aa20.47■□□□□ 0.87
LIME1-204ENST00000476183 ESR1P03372 595 aa20.47■□□□□ 0.87
LIME1-204ENST00000476183 NTRK1P04629 796 aa20.47■□□□□ 0.87
LIME1-204ENST00000476183 PKLRP30613 574 aa20.47■□□□□ 0.87
LIME1-204ENST00000476183 ADARP55265 1226 aaKnown RBP20.47■□□□□ 0.87
LIME1-204ENST00000476183 TBR1Q16650 682 aa20.47■□□□□ 0.87
LIME1-204ENST00000476183 KYNUQ16719 465 aa20.47■□□□□ 0.87
LIME1-204ENST00000476183 PRAMEF17Q5VTA0 474 aa20.47■□□□□ 0.87
LIME1-204ENST00000476183 ZNF470Q6ECI4 717 aa20.47■□□□□ 0.87
LIME1-204ENST00000476183 UNC5DQ6UXZ4 953 aa20.47■□□□□ 0.87
LIME1-204ENST00000476183 OTOAQ7RTW8 1153 aa20.47■□□□□ 0.87
LIME1-204ENST00000476183 DENND6AQ8IWF6 608 aa20.47■□□□□ 0.87
LIME1-204ENST00000476183 AKIRIN1Q9H9L7 192 aaPredicted RBP20.47■□□□□ 0.87
LIME1-204ENST00000476183 KCND1Q9NSA2 647 aa20.47■□□□□ 0.87
LIME1-204ENST00000476183 CROTQ9UKG9 612 aa20.47■□□□□ 0.87
LIME1-204ENST00000476183 RUVBL2Q9Y230 463 aaKnown RBP20.47■□□□□ 0.87
LIME1-204ENST00000476183 MRPS18BQ9Y676 258 aaKnown RBP20.47■□□□□ 0.87
LIME1-204ENST00000476183 NFS1Q9Y697 457 aa20.47■□□□□ 0.87
LIME1-204ENST00000476183 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.47■□□□□ 0.87
LIME1-204ENST00000476183 BSNQ9UPA5 3926 aa20.47■□□□□ 0.87
LIME1-204ENST00000476183 SEC16AO15027 2179 aa20.46■□□□□ 0.87
LIME1-204ENST00000476183 ZNF891A8MT65 544 aaPredicted RBP20.46■□□□□ 0.87
LIME1-204ENST00000476183 BANF1O75531 89 aa20.46■□□□□ 0.87
LIME1-204ENST00000476183 ITGB2P05107 769 aa20.46■□□□□ 0.87
LIME1-204ENST00000476183 CTBP1Q13363 440 aa20.46■□□□□ 0.87
LIME1-204ENST00000476183 GBX1Q14549 363 aa20.46■□□□□ 0.87
LIME1-204ENST00000476183 ZIC1Q15915 447 aa20.46■□□□□ 0.87
LIME1-204ENST00000476183 MSS51Q4VC12 460 aa20.46■□□□□ 0.87
LIME1-204ENST00000476183 PLEKHS1Q5SXH7 462 aa20.46■□□□□ 0.87
LIME1-204ENST00000476183 IZUMO3Q5VZ72 239 aa20.46■□□□□ 0.87
LIME1-204ENST00000476183 SPNS2Q8IVW8 549 aa20.46■□□□□ 0.87
LIME1-204ENST00000476183 DCUN1D3Q8IWE4 304 aa20.46■□□□□ 0.87
LIME1-204ENST00000476183 C17orf53Q8N3J3 647 aaPredicted RBP20.46■□□□□ 0.87
LIME1-204ENST00000476183 EXD3Q8N9H8 876 aa20.46■□□□□ 0.87
LIME1-204ENST00000476183 LINC01555Q8NAE3 123 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms