RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 CNDP1Q96KN2 507 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 MAP3K3Q99759 626 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 RIOK2Q9BVS4 552 aaKnown RBP13.65□□□□□ -0.22
ATG9A-220ENST00000475339 RAB33BQ9H082 229 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 FAM83DQ9H4H8 585 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 TRABDQ9H4I3 376 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 KLC4Q9NSK0 619 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 HACD3Q9P035 362 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 SH3BGRL2Q9UJC5 107 aa13.65□□□□□ -0.22
ATG9A-220ENST00000475339 CNOT6Q9ULM6 557 aaKnown RBP13.65□□□□□ -0.22
ATG9A-220ENST00000475339 STAB1Q9NY15 2570 aa13.64□□□□□ -0.23
ATG9A-220ENST00000475339 PCDH17O14917 1159 aa13.64□□□□□ -0.23
ATG9A-220ENST00000475339 LDB2O43679 373 aa13.64□□□□□ -0.23
ATG9A-220ENST00000475339 STIP1P31948 543 aaKnown RBP13.64□□□□□ -0.23
ATG9A-220ENST00000475339 CHRNA4P43681 627 aa13.64□□□□□ -0.23
ATG9A-220ENST00000475339 GDF10P55107 478 aa13.64□□□□□ -0.23
ATG9A-220ENST00000475339 SEPT7Q16181 437 aaKnown RBP13.64□□□□□ -0.23
ATG9A-220ENST00000475339 PARP6Q2NL67 630 aa13.64□□□□□ -0.23
ATG9A-220ENST00000475339 PTCHD3Q3KNS1 767 aa13.64□□□□□ -0.23
ATG9A-220ENST00000475339 MTFR2Q6P444 385 aa13.64□□□□□ -0.23
ATG9A-220ENST00000475339 GLT6D1Q7Z4J2 308 aa13.64□□□□□ -0.23
ATG9A-220ENST00000475339 D2HGDHQ8N465 521 aa13.64□□□□□ -0.23
ATG9A-220ENST00000475339 BCORP1Q8N888 145 aa13.64□□□□□ -0.23
ATG9A-220ENST00000475339 CPT1BQ92523 772 aa13.64□□□□□ -0.23
ATG9A-220ENST00000475339 MTFMTQ96DP5 389 aaKnown RBP13.64□□□□□ -0.23
ATG9A-220ENST00000475339 CLIP3Q96DZ5 547 aa13.64□□□□□ -0.23
ATG9A-220ENST00000475339 SPATA16Q9BXB7 569 aa13.64□□□□□ -0.23
ATG9A-220ENST00000475339 SLC40A1Q9NP59 571 aa13.64□□□□□ -0.23
ATG9A-220ENST00000475339 ZKSCAN5Q9Y2L8 839 aa13.64□□□□□ -0.23
ATG9A-220ENST00000475339 SPO11Q9Y5K1 396 aa13.64□□□□□ -0.23
ATG9A-220ENST00000475339 CCDC78A2IDD5 438 aa13.63□□□□□ -0.23
ATG9A-220ENST00000475339 E7EVH7 732 aa13.63□□□□□ -0.23
ATG9A-220ENST00000475339 PEX12O00623 359 aa13.63□□□□□ -0.23
ATG9A-220ENST00000475339 AGTP01019 485 aa13.63□□□□□ -0.23
ATG9A-220ENST00000475339 LMAN1P49257 510 aa13.63□□□□□ -0.23
ATG9A-220ENST00000475339 TDGF1P3P51864 188 aa13.63□□□□□ -0.23
ATG9A-220ENST00000475339 SOX8P57073 446 aa13.63□□□□□ -0.23
ATG9A-220ENST00000475339 HSD11B2P80365 405 aa13.63□□□□□ -0.23
ATG9A-220ENST00000475339 LTBQ06643 244 aa13.63□□□□□ -0.23
ATG9A-220ENST00000475339 OASLQ15646 514 aaKnown RBP13.63□□□□□ -0.23
ATG9A-220ENST00000475339 B3GNTL1Q67FW5 361 aaPredicted RBP13.63□□□□□ -0.23
ATG9A-220ENST00000475339 FCRL6Q6DN72 434 aa13.63□□□□□ -0.23
ATG9A-220ENST00000475339 GFRALQ6UXV0 394 aa13.63□□□□□ -0.23
ATG9A-220ENST00000475339 GSTA5Q7RTV2 222 aa13.63□□□□□ -0.23
ATG9A-220ENST00000475339 NLRP8Q86W28 1048 aa13.63□□□□□ -0.23
ATG9A-220ENST00000475339 SYTL1Q8IYJ3 562 aa13.63□□□□□ -0.23
ATG9A-220ENST00000475339 TAB3Q8N5C8 712 aaPredicted RBP13.63□□□□□ -0.23
ATG9A-220ENST00000475339 PBKQ96KB5 322 aa13.63□□□□□ -0.23
ATG9A-220ENST00000475339 IP6K3Q96PC2 410 aa13.63□□□□□ -0.23
ATG9A-220ENST00000475339 GBP5Q96PP8 586 aa13.63□□□□□ -0.23
ATG9A-220ENST00000475339 NAP1L3Q99457 506 aaPredicted RBP13.63□□□□□ -0.23
ATG9A-220ENST00000475339 SPOCK3Q9BQ16 436 aa13.63□□□□□ -0.23
ATG9A-220ENST00000475339 TBL1YQ9BQ87 522 aa13.63□□□□□ -0.23
ATG9A-220ENST00000475339 APOL2Q9BQE5 337 aa13.63□□□□□ -0.23
ATG9A-220ENST00000475339 GORASP1Q9BQQ3 440 aa13.63□□□□□ -0.23
ATG9A-220ENST00000475339 LRRC40Q9H9A6 602 aa13.63□□□□□ -0.23
ATG9A-220ENST00000475339 RMI1Q9H9A7 625 aa13.63□□□□□ -0.23
ATG9A-220ENST00000475339 HOMER3Q9NSC5 361 aa13.63□□□□□ -0.23
ATG9A-220ENST00000475339 PCMTD2Q9NV79 361 aa13.63□□□□□ -0.23
ATG9A-220ENST00000475339 P4HTMQ9NXG6 502 aa13.63□□□□□ -0.23
ATG9A-220ENST00000475339 PKP3Q9Y446 797 aa13.63□□□□□ -0.23
ATG9A-220ENST00000475339 COL6A5A8TX70 2615 aa13.62□□□□□ -0.23
ATG9A-220ENST00000475339 OR52A4PA6NMU1 304 aa13.62□□□□□ -0.23
ATG9A-220ENST00000475339 PDZK1P1A8MUH7 402 aa13.62□□□□□ -0.23
ATG9A-220ENST00000475339 PSMD3O43242 534 aa13.62□□□□□ -0.23
ATG9A-220ENST00000475339 KLF7O75840 302 aaPredicted RBP13.62□□□□□ -0.23
ATG9A-220ENST00000475339 CA7P43166 264 aa13.62□□□□□ -0.23
ATG9A-220ENST00000475339 CLCNKAP51800 687 aa13.62□□□□□ -0.23
ATG9A-220ENST00000475339 DCDC1P59894 354 aa13.62□□□□□ -0.23
ATG9A-220ENST00000475339 PPP2R2AP63151 447 aa13.62□□□□□ -0.23
ATG9A-220ENST00000475339 ADORA2A-AS1P86434 159 aa13.62□□□□□ -0.23
ATG9A-220ENST00000475339 ABRQ12979 859 aa13.62□□□□□ -0.23
ATG9A-220ENST00000475339 CCNG2Q16589 344 aa13.62□□□□□ -0.23
ATG9A-220ENST00000475339 ZDHHC20Q5W0Z9 365 aa13.62□□□□□ -0.23
ATG9A-220ENST00000475339 ZNF324BQ6AW86 544 aaPredicted RBP13.62□□□□□ -0.23
ATG9A-220ENST00000475339 TMEM207Q6UWW9 146 aa13.62□□□□□ -0.23
ATG9A-220ENST00000475339 TMC3Q7Z5M5 1100 aa13.62□□□□□ -0.23
ATG9A-220ENST00000475339 KMT5CQ86Y97 462 aa13.62□□□□□ -0.23
ATG9A-220ENST00000475339 OR8K5Q8NH50 307 aa13.62□□□□□ -0.23
ATG9A-220ENST00000475339 ZSCAN5AQ9BUG6 496 aa13.62□□□□□ -0.23
ATG9A-220ENST00000475339 BPIFA1Q9NP55 256 aa13.62□□□□□ -0.23
ATG9A-220ENST00000475339 POT1Q9NUX5 634 aa13.62□□□□□ -0.23
ATG9A-220ENST00000475339 FEZ2Q9UHY8 353 aaPredicted RBP13.62□□□□□ -0.23
ATG9A-220ENST00000475339 PYCARDQ9ULZ3 195 aa13.62□□□□□ -0.23
ATG9A-220ENST00000475339 AKAP6Q13023 2319 aa13.62□□□□□ -0.23
ATG9A-220ENST00000475339 C2orf81A6NN90 581 aa13.61□□□□□ -0.23
ATG9A-220ENST00000475339 USP27XA6NNY8 438 aa13.61□□□□□ -0.23
ATG9A-220ENST00000475339 KIAA1324LA8MWY0 1029 aaPredicted RBP13.61□□□□□ -0.23
ATG9A-220ENST00000475339 PGRMC1O00264 195 aaKnown RBP13.61□□□□□ -0.23
ATG9A-220ENST00000475339 AURKAO14965 403 aa13.61□□□□□ -0.23
ATG9A-220ENST00000475339 NUAK1O60285 661 aa13.61□□□□□ -0.23
ATG9A-220ENST00000475339 METTL18O95568 372 aa13.61□□□□□ -0.23
ATG9A-220ENST00000475339 BRAFP15056 766 aa13.61□□□□□ -0.23
ATG9A-220ENST00000475339 RPL10P27635 214 aaKnown RBP13.61□□□□□ -0.23
ATG9A-220ENST00000475339 ADRA1AP35348 466 aa13.61□□□□□ -0.23
ATG9A-220ENST00000475339 HMGCLP35914 325 aa13.61□□□□□ -0.23
ATG9A-220ENST00000475339 FDFT1P37268 417 aa13.61□□□□□ -0.23
ATG9A-220ENST00000475339 SPAM1P38567 509 aa13.61□□□□□ -0.23
ATG9A-220ENST00000475339 ARCN1P48444 511 aaKnown RBP13.61□□□□□ -0.23
ATG9A-220ENST00000475339 GNG11P61952 73 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms