RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 MICALCLQ6ZW33 695 aa14.7□□□□□ -0.06
VARS-223ENST00000474643 ZNF534Q76KX8 674 aa14.7□□□□□ -0.06
VARS-223ENST00000474643 PIANPQ8IYJ0 282 aa14.7□□□□□ -0.06
VARS-223ENST00000474643 CARFQ8N187 725 aa14.7□□□□□ -0.06
VARS-223ENST00000474643 CEP112Q8N8E3 955 aa14.7□□□□□ -0.06
VARS-223ENST00000474643 MCUQ8NE86 351 aa14.7□□□□□ -0.06
VARS-223ENST00000474643 SPATA4Q8NEY3 305 aa14.7□□□□□ -0.06
VARS-223ENST00000474643 CLIP3Q96DZ5 547 aa14.7□□□□□ -0.06
VARS-223ENST00000474643 ABHD17AQ96GS6 310 aa14.7□□□□□ -0.06
VARS-223ENST00000474643 HGH1Q9BTY7 390 aa14.7□□□□□ -0.06
VARS-223ENST00000474643 ACTL8Q9H568 366 aa14.7□□□□□ -0.06
VARS-223ENST00000474643 COG4Q9H9E3 785 aa14.7□□□□□ -0.06
VARS-223ENST00000474643 CATSPERZQ9NTU4 200 aa14.7□□□□□ -0.06
VARS-223ENST00000474643 NEU2Q9Y3R4 380 aa14.7□□□□□ -0.06
VARS-223ENST00000474643 MAD1L1Q9Y6D9 718 aa14.7□□□□□ -0.06
VARS-223ENST00000474643 TLN1Q9Y490 2541 aaKnown RBP14.7□□□□□ -0.06
VARS-223ENST00000474643 SETXQ7Z333 2677 aaKnown RBP14.69□□□□□ -0.06
VARS-223ENST00000474643 TRBV5-4A0A0C4DH59 114 aa14.69□□□□□ -0.06
VARS-223ENST00000474643 C17orf113A0A1B0GUU1 675 aa14.69□□□□□ -0.06
VARS-223ENST00000474643 SDR42E2A6NKP2 422 aa14.69□□□□□ -0.06
VARS-223ENST00000474643 QSOX1O00391 747 aa14.69□□□□□ -0.06
VARS-223ENST00000474643 TERTO14746 1132 aaKnown RBP14.69□□□□□ -0.06
VARS-223ENST00000474643 TTI1O43156 1089 aa14.69□□□□□ -0.06
VARS-223ENST00000474643 RFPL1O75677 317 aa14.69□□□□□ -0.06
VARS-223ENST00000474643 TIAF1O95411 115 aa14.69□□□□□ -0.06
VARS-223ENST00000474643 FTH1P02794 183 aa14.69□□□□□ -0.06
VARS-223ENST00000474643 GSTM1P09488 218 aa14.69□□□□□ -0.06
VARS-223ENST00000474643 MLNP12872 115 aa14.69□□□□□ -0.06
VARS-223ENST00000474643 CYP2A7P20853 494 aa14.69□□□□□ -0.06
VARS-223ENST00000474643 F8A1P23610 371 aa14.69□□□□□ -0.06
VARS-223ENST00000474643 NMBRP28336 390 aa14.69□□□□□ -0.06
VARS-223ENST00000474643 FOXN2P32314 431 aa14.69□□□□□ -0.06
VARS-223ENST00000474643 NSG1P42857 185 aa14.69□□□□□ -0.06
VARS-223ENST00000474643 PTGIRP43119 386 aa14.69□□□□□ -0.06
VARS-223ENST00000474643 PREPP48147 710 aa14.69□□□□□ -0.06
VARS-223ENST00000474643 GSTM4Q03013 218 aa14.69□□□□□ -0.06
VARS-223ENST00000474643 DHX34Q14147 1143 aaKnown RBP14.69□□□□□ -0.06
VARS-223ENST00000474643 ITIH4Q14624 930 aa14.69□□□□□ -0.06
VARS-223ENST00000474643 CERS6Q6ZMG9 384 aa14.69□□□□□ -0.06
VARS-223ENST00000474643 LILRA3Q8N6C8 439 aaPredicted RBP14.69□□□□□ -0.06
VARS-223ENST00000474643 TEX19Q8NA77 164 aa14.69□□□□□ -0.06
VARS-223ENST00000474643 SERPINB12Q96P63 405 aa14.69□□□□□ -0.06
VARS-223ENST00000474643 TRIM51Q9BSJ1 452 aa14.69□□□□□ -0.06
VARS-223ENST00000474643 KIFC1Q9BW19 673 aa14.69□□□□□ -0.06
VARS-223ENST00000474643 TRIM31Q9BZY9 425 aa14.69□□□□□ -0.06
VARS-223ENST00000474643 MRM3Q9HC36 420 aaKnown RBP14.69□□□□□ -0.06
VARS-223ENST00000474643 IRAK4Q9NWZ3 460 aa14.69□□□□□ -0.06
VARS-223ENST00000474643 SOX13Q9UN79 622 aa14.69□□□□□ -0.06
VARS-223ENST00000474643 G3BP2Q9UN86 482 aaKnown RBP14.69□□□□□ -0.06
VARS-223ENST00000474643 BSNQ9UPA5 3926 aa14.68□□□□□ -0.06
VARS-223ENST00000474643 MAGEB16A2A368 324 aa14.68□□□□□ -0.06
VARS-223ENST00000474643 SLC9B1P1A6NJY1 282 aa14.68□□□□□ -0.06
VARS-223ENST00000474643 CD3EAPO15446 510 aaKnown RBP14.68□□□□□ -0.06
VARS-223ENST00000474643 KDM1AO60341 852 aa14.68□□□□□ -0.06
VARS-223ENST00000474643 AP2A2O94973 939 aa14.68□□□□□ -0.06
VARS-223ENST00000474643 VAPBO95292 243 aa14.68□□□□□ -0.06
VARS-223ENST00000474643 OR56A5P0C7T3 313 aa14.68□□□□□ -0.06
VARS-223ENST00000474643 PSMA3P25788 255 aa14.68□□□□□ -0.06
VARS-223ENST00000474643 KPNA2P52292 529 aaKnown RBP14.68□□□□□ -0.06
VARS-223ENST00000474643 ACVR1Q04771 509 aa14.68□□□□□ -0.06
VARS-223ENST00000474643 C2orf54Q08AI8 447 aa14.68□□□□□ -0.06
VARS-223ENST00000474643 PRKG2Q13237 762 aa14.68□□□□□ -0.06
VARS-223ENST00000474643 BRD3Q15059 726 aa14.68□□□□□ -0.06
VARS-223ENST00000474643 RNASEH2BQ5TBB1 312 aaKnown RBP14.68□□□□□ -0.06
VARS-223ENST00000474643 CAPRIN2Q6IMN6 1127 aaKnown RBP14.68□□□□□ -0.06
VARS-223ENST00000474643 CAND1Q86VP6 1230 aaKnown RBP14.68□□□□□ -0.06
VARS-223ENST00000474643 MPP5Q8N3R9 675 aa14.68□□□□□ -0.06
VARS-223ENST00000474643 D2HGDHQ8N465 521 aa14.68□□□□□ -0.06
VARS-223ENST00000474643 CLDN19Q8N6F1 224 aa14.68□□□□□ -0.06
VARS-223ENST00000474643 NAT8LQ8N9F0 302 aa14.68□□□□□ -0.06
VARS-223ENST00000474643 ELMO1Q92556 727 aa14.68□□□□□ -0.06
VARS-223ENST00000474643 ZNF669Q96BR6 464 aaPredicted RBP14.68□□□□□ -0.06
VARS-223ENST00000474643 MFSD3Q96ES6 412 aa14.68□□□□□ -0.06
VARS-223ENST00000474643 GPR87Q9BY21 358 aa14.68□□□□□ -0.06
VARS-223ENST00000474643 MVB12BQ9H7P6 319 aa14.68□□□□□ -0.06
VARS-223ENST00000474643 C1GALT1Q9NS00 363 aa14.68□□□□□ -0.06
VARS-223ENST00000474643 SEMA5BQ9P283 1151 aa14.68□□□□□ -0.06
VARS-223ENST00000474643 POMT2Q9UKY4 750 aa14.68□□□□□ -0.06
VARS-223ENST00000474643 KCNMB2Q9Y691 235 aa14.68□□□□□ -0.06
VARS-223ENST00000474643 ASH1LQ9NR48 2969 aaKnown RBP14.68□□□□□ -0.06
VARS-223ENST00000474643 IGLV3-16A0A075B6K0 115 aa14.67□□□□□ -0.06
VARS-223ENST00000474643 EFCAB8A8MWE9 144 aa14.67□□□□□ -0.06
VARS-223ENST00000474643 C2orf74A8MZ97 194 aa14.67□□□□□ -0.06
VARS-223ENST00000474643 TMEM150CB9EJG8 249 aa14.67□□□□□ -0.06
VARS-223ENST00000474643 PFDN6O15212 129 aa14.67□□□□□ -0.06
VARS-223ENST00000474643 NDUFS3O75489 264 aa14.67□□□□□ -0.06
VARS-223ENST00000474643 CD151P48509 253 aa14.67□□□□□ -0.06
VARS-223ENST00000474643 TTPAP49638 278 aa14.67□□□□□ -0.06
VARS-223ENST00000474643 RPA4Q13156 261 aa14.67□□□□□ -0.06
VARS-223ENST00000474643 BOP1Q14137 746 aaKnown RBP14.67□□□□□ -0.06
VARS-223ENST00000474643 DNAJC21Q5F1R6 531 aaKnown RBP14.67□□□□□ -0.06
VARS-223ENST00000474643 MRNIPQ6NTE8 343 aa14.67□□□□□ -0.06
VARS-223ENST00000474643 FAM199XQ6PEV8 388 aaPredicted RBP14.67□□□□□ -0.06
VARS-223ENST00000474643 FBXO38Q6PIJ6 1188 aa14.67□□□□□ -0.06
VARS-223ENST00000474643 MAATS1Q7Z4T9 603 aa14.67□□□□□ -0.06
VARS-223ENST00000474643 SDCCAG8Q86SQ7 713 aaPredicted RBP14.67□□□□□ -0.06
VARS-223ENST00000474643 AMIGO1Q86WK6 493 aa14.67□□□□□ -0.06
VARS-223ENST00000474643 GPR135Q8IZ08 494 aa14.67□□□□□ -0.06
VARS-223ENST00000474643 TFGQ92734 400 aaPredicted RBP14.67□□□□□ -0.06
VARS-223ENST00000474643 TSSK1BQ9BXA7 367 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms