RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 GLB1L3Q8NCI6 653 aaPredicted RBP5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 IPCEF1Q8WWN9 437 aaPredicted RBP5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 ATG4AQ8WYN0 398 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 RELTQ969Z4 430 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 KLHL15Q96M94 604 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 BRIP1Q9BX63 1249 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 SHARPINQ9H0F6 387 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 WNT5BQ9H1J7 359 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 CARS2Q9HA77 564 aaKnown RBP5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 RANGRFQ9HD47 186 aaPredicted RBP5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 SMPD3Q9NY59 655 aaPredicted RBP5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 ELF5Q9UKW6 265 aaPredicted RBP5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 LIPT1Q9Y234 373 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 SNX5Q9Y5X3 404 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 LOC390937A0A1W2PQ73 354 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 hCG_1642624A0A1W2PR95 340 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 MEIOCA2RUB1 952 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 OR6C70A6NIJ9 312 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 C2orf74A8MZ97 194 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 ZBTB7AO95365 584 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 GDF11O95390 407 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 TSPAN12O95859 305 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 TOP3BO95985 862 aaKnown RBP5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 TGFB1P01137 390 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 CHRNA1P02708 482 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 FTH1P02794 183 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 HBQ1P09105 142 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 ZGLP1P0C6A0 271 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 GLRA2P23416 452 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 DNAJB1P25685 340 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 CD96P40200 585 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 POU3F4P49335 361 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 TBX4P57082 545 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 PTP4A2Q12974 167 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 DUSP4Q13115 394 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 ORC2Q13416 577 aaPredicted RBP5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 ERV3-1Q14264 604 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 GCKRQ14397 625 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 BTBD16Q32M84 506 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 NXNL2Q5VZ03 156 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 PYHIN1Q6K0P9 492 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 NAPRTQ6XQN6 538 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 KRT74Q7RTS7 529 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 PTRH1Q86Y79 214 aaKnown RBP5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 SRFBP1Q8NEF9 429 aaKnown RBP5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 SH3RF2Q8TEC5 729 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 AP2M1Q96CW1 435 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 SLC45A3Q96JT2 553 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 SIGLEC10Q96LC7 697 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 HS6ST2Q96MM7 605 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 ZSWIM3Q96MP5 696 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 LENG8Q96PV6 779 aaPredicted RBP5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 OR52B2Q96RD2 323 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 CPXM1Q96SM3 734 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 ORAI2Q96SN7 254 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 ZNF251Q9BRH9 671 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 ISCA1Q9BUE6 129 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 REXO4Q9GZR2 422 aaKnown RBP5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 UPF3AQ9H1J1 476 aaKnown RBP5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 KCTD10Q9H3F6 313 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 MROH8Q9H579 483 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 SH3GLB2Q9NR46 395 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 RGS18Q9NS28 235 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 CD274Q9NZQ7 290 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 FBLN5Q9UBX5 448 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 RAPGEFL1Q9UHV5 662 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 OSGIN1Q9UJX0 560 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 RPS6KA6Q9UK32 745 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 MAGED2Q9UNF1 606 aaPredicted RBP5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 PCDHGB2Q9Y5G2 931 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 PCDHGA7Q9Y5G6 932 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 TANC1Q9C0D5 1861 aa5.04□□□□□ -1.6
TMEM39A-206ENST00000473684 ATRNL1Q5VV63 1379 aa5.03□□□□□ -1.6
TMEM39A-206ENST00000473684 MYH9P35579 1960 aaKnown RBP5.03□□□□□ -1.6
TMEM39A-206ENST00000473684 RNF103-CHMP3A0A140T963 221 aa5.03□□□□□ -1.6
TMEM39A-206ENST00000473684 TUBAL3A6NHL2 446 aa5.03□□□□□ -1.6
TMEM39A-206ENST00000473684 A8MV72 311 aaPredicted RBP5.03□□□□□ -1.6
TMEM39A-206ENST00000473684 BTN3A3O00478 584 aa5.03□□□□□ -1.6
TMEM39A-206ENST00000473684 DVL2O14641 736 aa5.03□□□□□ -1.6
TMEM39A-206ENST00000473684 PRDM1O75626 825 aa5.03□□□□□ -1.6
TMEM39A-206ENST00000473684 ZMPSTE24O75844 475 aa5.03□□□□□ -1.6
TMEM39A-206ENST00000473684 CIAO1O76071 339 aa5.03□□□□□ -1.6
TMEM39A-206ENST00000473684 CELF2O95319 508 aaKnown RBP5.03□□□□□ -1.6
TMEM39A-206ENST00000473684 IFNA4P05014 189 aa5.03□□□□□ -1.6
TMEM39A-206ENST00000473684 KRT18P05783 430 aaKnown RBP5.03□□□□□ -1.6
TMEM39A-206ENST00000473684 SMIM6P0DI80 62 aa5.03□□□□□ -1.6
TMEM39A-206ENST00000473684 ADORA3P0DMS8 318 aa5.03□□□□□ -1.6
TMEM39A-206ENST00000473684 RRASP10301 218 aa5.03□□□□□ -1.6
TMEM39A-206ENST00000473684 PRKAR1AP10644 381 aa5.03□□□□□ -1.6
TMEM39A-206ENST00000473684 SLC2A4P14672 509 aa5.03□□□□□ -1.6
TMEM39A-206ENST00000473684 RPS2P15880 293 aaKnown RBP5.03□□□□□ -1.6
TMEM39A-206ENST00000473684 ALOX12P18054 663 aa5.03□□□□□ -1.6
TMEM39A-206ENST00000473684 MSH3P20585 1137 aa5.03□□□□□ -1.6
TMEM39A-206ENST00000473684 HLA-DMAP28067 261 aa5.03□□□□□ -1.6
TMEM39A-206ENST00000473684 TRHRP34981 398 aaPredicted RBP5.03□□□□□ -1.6
TMEM39A-206ENST00000473684 ETV6P41212 452 aa5.03□□□□□ -1.6
TMEM39A-206ENST00000473684 HNF4AP41235 474 aa5.03□□□□□ -1.6
TMEM39A-206ENST00000473684 GSTM5P46439 218 aa5.03□□□□□ -1.6
TMEM39A-206ENST00000473684 ARFIP1P53367 373 aa5.03□□□□□ -1.6
TMEM39A-206ENST00000473684 PKNOX1P55347 436 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms