RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 GPR21Q99679 349 aa14.84□□□□□ -0.03
SDC3-203ENST00000471567 ZNF768Q9H5H4 540 aaKnown RBP14.84□□□□□ -0.03
SDC3-203ENST00000471567 OR6C2Q9NZP2 312 aa14.84□□□□□ -0.03
SDC3-203ENST00000471567 ICKQ9UPZ9 632 aa14.84□□□□□ -0.03
SDC3-203ENST00000471567 TDRKHQ9Y2W6 561 aaKnown RBP14.84□□□□□ -0.03
SDC3-203ENST00000471567 TLCD2A6NGC4 264 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 C2orf74A8MZ97 194 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 BTN3A3O00478 584 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 BTN3A1O00481 513 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 NVLO15381 856 aaKnown RBP14.83□□□□□ -0.04
SDC3-203ENST00000471567 RASSF9O75901 435 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 C1orf105O95561 183 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 TPBGLP0DKB5 382 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 MPC1LP0DKB6 136 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 FGF3P11487 239 aaPredicted RBP14.83□□□□□ -0.04
SDC3-203ENST00000471567 CCL4P13236 92 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 HGFP14210 728 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 POLR2CP19387 275 aaPredicted RBP14.83□□□□□ -0.04
SDC3-203ENST00000471567 ITIH1P19827 911 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 GPX6P59796 221 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 CUL1Q13616 776 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 KLHL38Q2WGJ6 581 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 TMEM164Q5U3C3 297 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 LRRC8EQ6NSJ5 796 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 FAM45BPQ6NSW5 357 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 CAPN12Q6ZSI9 719 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 FAM92BQ6ZTR7 304 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 STRA8Q7Z7C7 330 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 KMT5CQ86Y97 462 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 RELL1Q8IUW5 271 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 ADGRF3Q8IZF5 1079 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 GIMAP7Q8NHV1 300 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 SNIP1Q8TAD8 396 aaKnown RBP14.83□□□□□ -0.04
SDC3-203ENST00000471567 FAM45AQ8TCE6 357 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 TAAR9Q96RI9 348 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 NDNQ99608 321 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 SLC30A3Q99726 388 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 TWSG1Q9GZX9 223 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 XKR8Q9H6D3 395 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 LRRC4CQ9HCJ2 640 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 SLC17A6Q9P2U8 582 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 TRMT6Q9UJA5 497 aaKnown RBP14.83□□□□□ -0.04
SDC3-203ENST00000471567 POMT2Q9UKY4 750 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 VWA7Q9Y334 891 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 NFS1Q9Y697 457 aa14.83□□□□□ -0.04
SDC3-203ENST00000471567 IGF2RP11717 2491 aa14.82□□□□□ -0.04
SDC3-203ENST00000471567 TCRBV9S1A1TA0A576 114 aa14.82□□□□□ -0.04
SDC3-203ENST00000471567 FAM159BA6NKW6 160 aa14.82□□□□□ -0.04
SDC3-203ENST00000471567 EFCAB7A8K855 629 aa14.82□□□□□ -0.04
SDC3-203ENST00000471567 KIF1CO43896 1103 aaKnown RBP14.82□□□□□ -0.04
SDC3-203ENST00000471567 PSIP1O75475 530 aaKnown RBP14.82□□□□□ -0.04
SDC3-203ENST00000471567 PKLRP30613 574 aa14.82□□□□□ -0.04
SDC3-203ENST00000471567 ETV5P41161 510 aa14.82□□□□□ -0.04
SDC3-203ENST00000471567 RAB28P51157 221 aa14.82□□□□□ -0.04
SDC3-203ENST00000471567 KPNA2P52292 529 aaKnown RBP14.82□□□□□ -0.04
SDC3-203ENST00000471567 MAPK10P53779 464 aa14.82□□□□□ -0.04
SDC3-203ENST00000471567 RAB15P59190 212 aa14.82□□□□□ -0.04
SDC3-203ENST00000471567 PPP1CAP62136 330 aa14.82□□□□□ -0.04
SDC3-203ENST00000471567 TIAL1Q01085 375 aaKnown RBP eCLIP14.82□□□□□ -0.04
SDC3-203ENST00000471567 MC2RQ01718 297 aa14.82□□□□□ -0.04
SDC3-203ENST00000471567 GRB7Q14451 532 aa14.82□□□□□ -0.04
SDC3-203ENST00000471567 RBM20Q5T481 1227 aaKnown RBP14.82□□□□□ -0.04
SDC3-203ENST00000471567 HECTD2Q5U5R9 776 aa14.82□□□□□ -0.04
SDC3-203ENST00000471567 ZC3HC1Q86WB0 502 aaKnown RBP14.82□□□□□ -0.04
SDC3-203ENST00000471567 IFT20Q8IY31 132 aa14.82□□□□□ -0.04
SDC3-203ENST00000471567 BMPERQ8N8U9 685 aa14.82□□□□□ -0.04
SDC3-203ENST00000471567 IFT81Q8WYA0 676 aa14.82□□□□□ -0.04
SDC3-203ENST00000471567 SLC41A2Q96JW4 573 aa14.82□□□□□ -0.04
SDC3-203ENST00000471567 MAP3K3Q99759 626 aa14.82□□□□□ -0.04
SDC3-203ENST00000471567 DDA1Q9BW61 102 aa14.82□□□□□ -0.04
SDC3-203ENST00000471567 RAB11FIP5Q9BXF6 653 aa14.82□□□□□ -0.04
SDC3-203ENST00000471567 FBXO8Q9NRD0 319 aa14.82□□□□□ -0.04
SDC3-203ENST00000471567 C1GALT1Q9NS00 363 aa14.82□□□□□ -0.04
SDC3-203ENST00000471567 OCIAD1Q9NX40 245 aa14.82□□□□□ -0.04
SDC3-203ENST00000471567 ACSL6Q9UKU0 697 aa14.82□□□□□ -0.04
SDC3-203ENST00000471567 PCDHGA3Q9Y5H0 932 aa14.82□□□□□ -0.04
SDC3-203ENST00000471567 PSAT1Q9Y617 370 aa14.82□□□□□ -0.04
SDC3-203ENST00000471567 IGHV5-51A0A0C4DH38 117 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 PIPSLA2A3N6 862 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 GSAPA4D1B5 854 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 AGRPO00253 132 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 TAF4O00268 1085 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 RASGRF2O14827 1237 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 CATP04040 527 aaKnown RBP14.81□□□□□ -0.04
SDC3-203ENST00000471567 CHRM5P08912 532 aaPredicted RBP14.81□□□□□ -0.04
SDC3-203ENST00000471567 NELFEP18615 380 aaKnown RBP14.81□□□□□ -0.04
SDC3-203ENST00000471567 FDXRP22570 491 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 PRDX3P30048 256 aaKnown RBP14.81□□□□□ -0.04
SDC3-203ENST00000471567 SLC5A2P31639 672 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 STX2P32856 288 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 ABCG1P45844 678 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 RGS4P49798 205 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 SEPHS1P49903 392 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 CDKN2DP55273 166 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 PCBP4P57723 403 aaKnown RBP14.81□□□□□ -0.04
SDC3-203ENST00000471567 KIR2DS3Q14952 304 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 CYHR1Q6ZMK1 362 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 FAM129CQ86XR2 697 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 RASGRP3Q8IV61 690 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 CPNE9Q8IYJ1 553 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms