RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 ANKRD34CP0C6C1 535 aa6.35□□□□□ -1.39
SMC5-202ENST00000471372 TNFRSF1BP20333 461 aa6.35□□□□□ -1.39
SMC5-202ENST00000471372 PTGER4P35408 488 aa6.35□□□□□ -1.39
SMC5-202ENST00000471372 ZNF81P51508 661 aa6.35□□□□□ -1.39
SMC5-202ENST00000471372 MFAP3P55082 362 aa6.35□□□□□ -1.39
SMC5-202ENST00000471372 UCP2P55851 309 aa6.35□□□□□ -1.39
SMC5-202ENST00000471372 RUNX1T1Q06455 604 aa6.35□□□□□ -1.39
SMC5-202ENST00000471372 SYT14P1Q58G82 188 aa6.35□□□□□ -1.39
SMC5-202ENST00000471372 RAD9BQ6WBX8 426 aa6.35□□□□□ -1.39
SMC5-202ENST00000471372 NLRP14Q86W24 1093 aa6.35□□□□□ -1.39
SMC5-202ENST00000471372 LMNTD2Q8IXW0 634 aa6.35□□□□□ -1.39
SMC5-202ENST00000471372 ZNF548Q8NEK5 533 aaPredicted RBP6.35□□□□□ -1.39
SMC5-202ENST00000471372 PRSS3P2Q8NHM4 247 aa6.35□□□□□ -1.39
SMC5-202ENST00000471372 COQ8BQ96D53 544 aa6.35□□□□□ -1.39
SMC5-202ENST00000471372 SLC2A11Q9BYW1 496 aa6.35□□□□□ -1.39
SMC5-202ENST00000471372 SPG21Q9NZD8 308 aa6.35□□□□□ -1.39
SMC5-202ENST00000471372 ZNHIT2Q9UHR6 403 aa6.35□□□□□ -1.39
SMC5-202ENST00000471372 RPH3AQ9Y2J0 694 aaPredicted RBP6.35□□□□□ -1.39
SMC5-202ENST00000471372 SPIN1Q9Y657 262 aaPredicted RBP6.35□□□□□ -1.39
SMC5-202ENST00000471372 ELOVL7A1L3X0 281 aa6.34□□□□□ -1.39
SMC5-202ENST00000471372 TXNL1O43396 289 aa6.34□□□□□ -1.39
SMC5-202ENST00000471372 CRCPO75575 148 aa6.34□□□□□ -1.39
SMC5-202ENST00000471372 BMP10O95393 424 aa6.34□□□□□ -1.39
SMC5-202ENST00000471372 C21orf33P30042 268 aaPredicted RBP6.34□□□□□ -1.39
SMC5-202ENST00000471372 SLC6A6P31641 620 aa6.34□□□□□ -1.39
SMC5-202ENST00000471372 PSMC4P43686 418 aa6.34□□□□□ -1.39
SMC5-202ENST00000471372 RABIFP47224 123 aa6.34□□□□□ -1.39
SMC5-202ENST00000471372 MAT1AQ00266 395 aaKnown RBP6.34□□□□□ -1.39
SMC5-202ENST00000471372 GPS2Q13227 327 aa6.34□□□□□ -1.39
SMC5-202ENST00000471372 PDK1Q15118 436 aa6.34□□□□□ -1.39
SMC5-202ENST00000471372 SIAH3Q8IW03 269 aa6.34□□□□□ -1.39
SMC5-202ENST00000471372 AQP12AQ8IXF9 295 aa6.34□□□□□ -1.39
SMC5-202ENST00000471372 GBGT1Q8N5D6 347 aa6.34□□□□□ -1.39
SMC5-202ENST00000471372 LRRC8CQ8TDW0 803 aa6.34□□□□□ -1.39
SMC5-202ENST00000471372 WASF1Q92558 559 aa6.34□□□□□ -1.39
SMC5-202ENST00000471372 FAM84BQ96KN1 310 aaPredicted RBP6.34□□□□□ -1.39
SMC5-202ENST00000471372 SPATA13Q96N96 652 aa6.34□□□□□ -1.39
SMC5-202ENST00000471372 PANX3Q96QZ0 392 aa6.34□□□□□ -1.39
SMC5-202ENST00000471372 RUFY1Q96T51 708 aa6.34□□□□□ -1.39
SMC5-202ENST00000471372 BTBD10Q9BSF8 475 aa6.34□□□□□ -1.39
SMC5-202ENST00000471372 KRT23Q9C075 422 aa6.34□□□□□ -1.39
SMC5-202ENST00000471372 LRMDAQ9H2I8 198 aa6.34□□□□□ -1.39
SMC5-202ENST00000471372 EBF3Q9H4W6 596 aa6.34□□□□□ -1.39
SMC5-202ENST00000471372 AKIRIN1Q9H9L7 192 aaPredicted RBP6.34□□□□□ -1.39
SMC5-202ENST00000471372 RNPEPL1Q9HAU8 725 aa6.34□□□□□ -1.39
SMC5-202ENST00000471372 PNPLA3Q9NST1 481 aa6.34□□□□□ -1.39
SMC5-202ENST00000471372 SLCO1C1Q9NYB5 712 aa6.34□□□□□ -1.39
SMC5-202ENST00000471372 HOOK1Q9UJC3 728 aaKnown RBP6.34□□□□□ -1.39
SMC5-202ENST00000471372 PIN4Q9Y237 131 aaKnown RBP6.34□□□□□ -1.39
SMC5-202ENST00000471372 HBS1LQ9Y450 684 aaKnown RBP6.34□□□□□ -1.39
SMC5-202ENST00000471372 YIPF1Q9Y548 306 aa6.34□□□□□ -1.39
SMC5-202ENST00000471372 HS3ST3B1Q9Y662 390 aa6.34□□□□□ -1.39
SMC5-202ENST00000471372 RNF103-CHMP3A0A140T963 221 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 OR5K3A6NET4 321 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 KBTBD13C9JR72 458 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 RNF103O00237 685 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 DVL1O14640 695 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 SPRY3O43610 288 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 GPR137BO60478 399 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 DDHD2O94830 711 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 LUC7L3O95232 432 aaKnown RBP6.33□□□□□ -1.4
SMC5-202ENST00000471372 LDLRP01130 860 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 SBK2P0C263 348 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 C8orf89P0DMQ9 161 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 EPCAMP16422 314 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 KIF5BP33176 963 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 ZNF131P52739 623 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 EGR4Q05215 589 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 GFPT1Q06210 699 aaPredicted RBP6.33□□□□□ -1.4
SMC5-202ENST00000471372 TRA2AQ13595 282 aaKnown RBP eCLIP6.33□□□□□ -1.4
SMC5-202ENST00000471372 VEZF1Q14119 521 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 DHX34Q14147 1143 aaKnown RBP6.33□□□□□ -1.4
SMC5-202ENST00000471372 OASLQ15646 514 aaKnown RBP6.33□□□□□ -1.4
SMC5-202ENST00000471372 IFI44LQ53G44 452 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 STRIP1Q5VSL9 837 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 SHC4Q6S5L8 630 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 PRSS55Q6UWB4 352 aaPredicted RBP6.33□□□□□ -1.4
SMC5-202ENST00000471372 COMMD2Q86X83 199 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 SERPINA12Q8IW75 414 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 HDDC3Q8N4P3 179 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 ARL6IP6Q8N6S5 226 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 ARFGAP1Q8N6T3 406 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 AMER3Q8N944 861 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 MPLKIPQ8TAP9 179 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 FIG4Q92562 907 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 PIGTQ969N2 578 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 AP2M1Q96CW1 435 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 TSGA13Q96PP4 275 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 SNX25Q9H3E2 840 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 PCDH9Q9HC56 1237 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 ZBTB40Q9NUA8 1239 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 TRNAU1APQ9NX07 287 aaKnown RBP6.33□□□□□ -1.4
SMC5-202ENST00000471372 COMMD8Q9NX08 183 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 B3GAT1Q9P2W7 334 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 AGO1Q9UL18 857 aaKnown RBP6.33□□□□□ -1.4
SMC5-202ENST00000471372 BLOC1S6Q9UL45 172 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 GPR132Q9UNW8 380 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 INSL5Q9Y5Q6 135 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 PTGDR2Q9Y5Y4 395 aa6.33□□□□□ -1.4
SMC5-202ENST00000471372 IGLV5-39A0A0G2JS06 123 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms