RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 HOXC8P31273 242 aa5.12□□□□□ -1.59
CCDC39-202ENST00000471307 NIPAL4Q0D2K0 466 aa5.12□□□□□ -1.59
CCDC39-202ENST00000471307 CDC16Q13042 620 aa5.12□□□□□ -1.59
CCDC39-202ENST00000471307 NAB2Q15742 525 aa5.12□□□□□ -1.59
CCDC39-202ENST00000471307 LCE1FQ5T754 118 aa5.12□□□□□ -1.59
CCDC39-202ENST00000471307 PACS1Q6VY07 963 aa5.12□□□□□ -1.59
CCDC39-202ENST00000471307 SDCCAG8Q86SQ7 713 aaPredicted RBP5.12□□□□□ -1.59
CCDC39-202ENST00000471307 TRPT1Q86TN4 253 aaKnown RBP5.12□□□□□ -1.59
CCDC39-202ENST00000471307 TSPAN33Q86UF1 283 aa5.12□□□□□ -1.59
CCDC39-202ENST00000471307 LONP2Q86WA8 852 aa5.12□□□□□ -1.59
CCDC39-202ENST00000471307 ARHGAP12Q8IWW6 846 aa5.12□□□□□ -1.59
CCDC39-202ENST00000471307 RBM15BQ8NDT2 890 aaKnown RBP5.12□□□□□ -1.59
CCDC39-202ENST00000471307 PPHLN1Q8NEY8 458 aaKnown RBP5.12□□□□□ -1.59
CCDC39-202ENST00000471307 TMEM190Q8WZ59 177 aa5.12□□□□□ -1.59
CCDC39-202ENST00000471307 SEC62Q99442 399 aaKnown RBP5.12□□□□□ -1.59
CCDC39-202ENST00000471307 C2orf42Q9NWW7 574 aa5.12□□□□□ -1.59
CCDC39-202ENST00000471307 POLLQ9UGP5 575 aa5.12□□□□□ -1.59
CCDC39-202ENST00000471307 FBXO2Q9UK22 296 aaPredicted RBP5.12□□□□□ -1.59
CCDC39-202ENST00000471307 COL4A1P02462 1669 aa5.12□□□□□ -1.59
CCDC39-202ENST00000471307 C5orf60A6NFR6 353 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 SCAMP1O15126 338 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 FRAT2O75474 233 aaPredicted RBP5.11□□□□□ -1.59
CCDC39-202ENST00000471307 ICAM1P05362 532 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 ZFYP08048 801 aaPredicted RBP5.11□□□□□ -1.59
CCDC39-202ENST00000471307 PRSS56P0CW18 603 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 CDH2P19022 906 aaPredicted RBP5.11□□□□□ -1.59
CCDC39-202ENST00000471307 CHMLP26374 656 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 PBX3P40426 434 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 GYG1P46976 350 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 RGS19P49795 217 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 C14orf177Q52M58 125 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 ZC2HC1CQ53FD0 456 aaPredicted RBP5.11□□□□□ -1.59
CCDC39-202ENST00000471307 ZSCAN25Q6NSZ9 544 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 PLXDC2Q6UX71 529 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 SLC5A8Q8N695 610 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 PDILTQ8N807 584 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 FRMD1Q8N878 549 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 ADAD2Q8NCV1 583 aaKnown RBP5.11□□□□□ -1.59
CCDC39-202ENST00000471307 TDRD7Q8NHU6 1098 aaKnown RBP5.11□□□□□ -1.59
CCDC39-202ENST00000471307 TAF15Q92804 592 aaKnown RBP eCLIP5.11□□□□□ -1.59
CCDC39-202ENST00000471307 SEMA3CQ99985 751 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 FSD1Q9BTV5 496 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 COA1Q9GZY4 146 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 PIGMQ9H3S5 423 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 EPB41L5Q9HCM4 733 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 PAG1Q9NWQ8 432 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 ADPRHL2Q9NX46 363 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 HMG20BQ9P0W2 317 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 KLHL9Q9P2J3 617 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 LIMA1Q9UHB6 759 aaKnown RBP5.11□□□□□ -1.59
CCDC39-202ENST00000471307 MMP24Q9Y5R2 645 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 KCNE2Q9Y6J6 123 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 MED23Q9ULK4 1368 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 LRRC37AA6NMS7 1700 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 ARAP2Q8WZ64 1704 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 A0A1B0GUL6 1792 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 DLEC1Q9Y238 1755 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 AK9Q5TCS8 1911 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 AKAP11Q9UKA4 1901 aa5.11□□□□□ -1.59
CCDC39-202ENST00000471307 EPB41L2O43491 1005 aaKnown RBP5.1□□□□□ -1.59
CCDC39-202ENST00000471307 ZNF883P0CG24 379 aa5.1□□□□□ -1.59
CCDC39-202ENST00000471307 CHRNB4P30926 498 aa5.1□□□□□ -1.59
CCDC39-202ENST00000471307 CCR9P51686 369 aa5.1□□□□□ -1.59
CCDC39-202ENST00000471307 CEBPZQ03701 1054 aaKnown RBP5.1□□□□□ -1.59
CCDC39-202ENST00000471307 RFX7Q2KHR2 1363 aa5.1□□□□□ -1.59
CCDC39-202ENST00000471307 JAKMIP3Q5VZ66 844 aa5.1□□□□□ -1.59
CCDC39-202ENST00000471307 CYP20A1Q6UW02 462 aa5.1□□□□□ -1.59
CCDC39-202ENST00000471307 OLFM4Q6UX06 510 aa5.1□□□□□ -1.59
CCDC39-202ENST00000471307 ZNF248Q8NDW4 579 aa5.1□□□□□ -1.59
CCDC39-202ENST00000471307 TRPC4APQ8TEL6 797 aa5.1□□□□□ -1.59
CCDC39-202ENST00000471307 MPP4Q96JB8 637 aa5.1□□□□□ -1.59
CCDC39-202ENST00000471307 EGLN2Q96KS0 407 aa5.1□□□□□ -1.59
CCDC39-202ENST00000471307 LRR1Q96L50 414 aa5.1□□□□□ -1.59
CCDC39-202ENST00000471307 CD209Q9NNX6 404 aa5.1□□□□□ -1.59
CCDC39-202ENST00000471307 DIAPH3Q9NSV4 1193 aa5.1□□□□□ -1.59
CCDC39-202ENST00000471307 MTMR10Q9NXD2 777 aa5.1□□□□□ -1.59
CCDC39-202ENST00000471307 C2CD2Q9Y426 696 aa5.1□□□□□ -1.59
CCDC39-202ENST00000471307 JRKLQ9Y4A0 524 aa5.1□□□□□ -1.59
CCDC39-202ENST00000471307 CHD4Q14839 1912 aa5.09□□□□□ -1.59
CCDC39-202ENST00000471307 CACNA1SQ13698 1873 aa5.09□□□□□ -1.59
CCDC39-202ENST00000471307 FAM205AQ6ZU69 1335 aa5.09□□□□□ -1.59
CCDC39-202ENST00000471307 SALL1Q9NSC2 1324 aa5.09□□□□□ -1.59
CCDC39-202ENST00000471307 RNF113AO15541 343 aaKnown RBP5.09□□□□□ -1.59
CCDC39-202ENST00000471307 CIDEAO60543 219 aa5.09□□□□□ -1.59
CCDC39-202ENST00000471307 REC8O95072 547 aa5.09□□□□□ -1.59
CCDC39-202ENST00000471307 HIST1H2ABP04908 130 aa5.09□□□□□ -1.59
CCDC39-202ENST00000471307 TFAP2AP05549 437 aa5.09□□□□□ -1.59
CCDC39-202ENST00000471307 HSPA1AP0DMV8 641 aaKnown RBP5.09□□□□□ -1.59
CCDC39-202ENST00000471307 HSPA1BP0DMV9 641 aaKnown RBP5.09□□□□□ -1.59
CCDC39-202ENST00000471307 HIST1H2ADP20671 130 aa5.09□□□□□ -1.59
CCDC39-202ENST00000471307 GEMIN4P57678 1058 aaKnown RBP5.09□□□□□ -1.59
CCDC39-202ENST00000471307 KRTAP10-12P60413 245 aa5.09□□□□□ -1.59
CCDC39-202ENST00000471307 GNB1P62873 340 aa5.09□□□□□ -1.59
CCDC39-202ENST00000471307 MBTD1Q05BQ5 628 aa5.09□□□□□ -1.59
CCDC39-202ENST00000471307 DUOXA1Q1HG43 343 aa5.09□□□□□ -1.59
CCDC39-202ENST00000471307 RBMS3Q6XE24 437 aaKnown RBP5.09□□□□□ -1.59
CCDC39-202ENST00000471307 GLDNQ6ZMI3 551 aaPredicted RBP5.09□□□□□ -1.59
CCDC39-202ENST00000471307 HIST3H2AQ7L7L0 130 aa5.09□□□□□ -1.59
CCDC39-202ENST00000471307 RASGEF1CQ8N431 466 aa5.09□□□□□ -1.59
CCDC39-202ENST00000471307 GBGT1Q8N5D6 347 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms