RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 RAB6BQ9NRW1 208 aa13.11□□□□□ -0.31
HMGN1-211ENST00000471260 PIH1D1Q9NWS0 290 aaKnown RBP13.11□□□□□ -0.31
HMGN1-211ENST00000471260 POLG2Q9UHN1 485 aa13.11□□□□□ -0.31
HMGN1-211ENST00000471260 SPTA1P02549 2419 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 CFAP46Q8IYW2 2715 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 CCDC162PA2VCL2 907 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 SUV39H1O43463 412 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 KDM1AO60341 852 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 CPNE3O75131 537 aaKnown RBP13.1□□□□□ -0.31
HMGN1-211ENST00000471260 CREG1O75629 220 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 TIAF1O95411 115 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 PRSS56P0CW18 603 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 PRKAR1AP10644 381 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 CDH3P22223 829 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 F8A1P23610 371 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 PRAMEP78395 509 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 DNASE1L3Q13609 305 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 BOP1Q14137 746 aaKnown RBP13.1□□□□□ -0.31
HMGN1-211ENST00000471260 CCDC38Q502W7 563 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 C16orf46Q6P387 395 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 ATG14Q6ZNE5 492 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 AMIGO1Q86WK6 493 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 TBC1D21Q8IYX1 336 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 TAB3Q8N5C8 712 aaPredicted RBP13.1□□□□□ -0.31
HMGN1-211ENST00000471260 OR52E1Q8NGJ3 308 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 OR4L1Q8NH43 312 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 ELMO1Q92556 727 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 HDAC10Q969S8 669 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 TSSK1BQ9BXA7 367 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 PITPNM3Q9BZ71 974 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 HOMER3Q9NSC5 361 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 SOHLH2Q9NX45 425 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 POLHQ9Y253 713 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 PRSS21Q9Y6M0 314 aa13.1□□□□□ -0.31
HMGN1-211ENST00000471260 SLC5A10A0PJK1 596 aa13.09□□□□□ -0.31
HMGN1-211ENST00000471260 GSAPA4D1B5 854 aa13.09□□□□□ -0.31
HMGN1-211ENST00000471260 SLC9B1P1A6NJY1 282 aa13.09□□□□□ -0.31
HMGN1-211ENST00000471260 C2orf74A8MZ97 194 aa13.09□□□□□ -0.31
HMGN1-211ENST00000471260 KATNA1O75449 491 aa13.09□□□□□ -0.31
HMGN1-211ENST00000471260 SCRG1O75711 98 aa13.09□□□□□ -0.31
HMGN1-211ENST00000471260 GOT2P00505 430 aaKnown RBP13.09□□□□□ -0.31
HMGN1-211ENST00000471260 KLK3P07288 261 aaPredicted RBP13.09□□□□□ -0.31
HMGN1-211ENST00000471260 APRTP07741 180 aa13.09□□□□□ -0.31
HMGN1-211ENST00000471260 ACADLP28330 430 aa13.09□□□□□ -0.31
HMGN1-211ENST00000471260 SHMT2P34897 504 aa13.09□□□□□ -0.31
HMGN1-211ENST00000471260 RPS15P62841 145 aaKnown RBP13.09□□□□□ -0.31
HMGN1-211ENST00000471260 CDK16Q00536 496 aa13.09□□□□□ -0.31
HMGN1-211ENST00000471260 SNX1Q13596 522 aa13.09□□□□□ -0.31
HMGN1-211ENST00000471260 SIX1Q15475 284 aaPredicted RBP13.09□□□□□ -0.31
HMGN1-211ENST00000471260 DEFB109BQ30KR1 87 aa13.09□□□□□ -0.31
HMGN1-211ENST00000471260 FASTKD1Q53R41 847 aaKnown RBP13.09□□□□□ -0.31
HMGN1-211ENST00000471260 AARS2Q5JTZ9 985 aaKnown RBP13.09□□□□□ -0.31
HMGN1-211ENST00000471260 PCID2Q5JVF3 399 aa13.09□□□□□ -0.31
HMGN1-211ENST00000471260 ZNF517Q6ZMY9 492 aaPredicted RBP13.09□□□□□ -0.31
HMGN1-211ENST00000471260 PRICKLE2Q7Z3G6 844 aa13.09□□□□□ -0.31
HMGN1-211ENST00000471260 TMEM126BQ8IUX1 230 aa13.09□□□□□ -0.31
HMGN1-211ENST00000471260 PHC3Q8NDX5 983 aa13.09□□□□□ -0.31
HMGN1-211ENST00000471260 PPHLN1Q8NEY8 458 aaKnown RBP13.09□□□□□ -0.31
HMGN1-211ENST00000471260 CPT1BQ92523 772 aa13.09□□□□□ -0.31
HMGN1-211ENST00000471260 SERTAD3Q9UJW9 196 aa13.09□□□□□ -0.31
HMGN1-211ENST00000471260 ANAPC5Q9UJX4 755 aa13.09□□□□□ -0.31
HMGN1-211ENST00000471260 TCAF1Q9Y4C2 921 aa13.09□□□□□ -0.31
HMGN1-211ENST00000471260 MRPS18BQ9Y676 258 aaKnown RBP13.09□□□□□ -0.31
HMGN1-211ENST00000471260 KCNMB2Q9Y691 235 aa13.09□□□□□ -0.31
HMGN1-211ENST00000471260 CCDC78A2IDD5 438 aa13.08□□□□□ -0.32
HMGN1-211ENST00000471260 OR51F1A6NGY5 319 aa13.08□□□□□ -0.32
HMGN1-211ENST00000471260 HMGB1P1B2RPK0 211 aaPredicted RBP13.08□□□□□ -0.32
HMGN1-211ENST00000471260 BTN3A3O00478 584 aa13.08□□□□□ -0.32
HMGN1-211ENST00000471260 BTN3A1O00481 513 aa13.08□□□□□ -0.32
HMGN1-211ENST00000471260 NTRK1P04629 796 aa13.08□□□□□ -0.32
HMGN1-211ENST00000471260 PTPN4P29074 926 aa13.08□□□□□ -0.32
HMGN1-211ENST00000471260 CXCR5P32302 372 aa13.08□□□□□ -0.32
HMGN1-211ENST00000471260 RPL22P35268 128 aaKnown RBP13.08□□□□□ -0.32
HMGN1-211ENST00000471260 GRIA1P42261 906 aa13.08□□□□□ -0.32
HMGN1-211ENST00000471260 PREPP48147 710 aa13.08□□□□□ -0.32
HMGN1-211ENST00000471260 ARCN1P48444 511 aaKnown RBP13.08□□□□□ -0.32
HMGN1-211ENST00000471260 ERV3-1Q14264 604 aa13.08□□□□□ -0.32
HMGN1-211ENST00000471260 IZUMO3Q5VZ72 239 aa13.08□□□□□ -0.32
HMGN1-211ENST00000471260 MAATS1Q7Z4T9 603 aa13.08□□□□□ -0.32
HMGN1-211ENST00000471260 GSPT2Q8IYD1 628 aaKnown RBP13.08□□□□□ -0.32
HMGN1-211ENST00000471260 ADGRF3Q8IZF5 1079 aa13.08□□□□□ -0.32
HMGN1-211ENST00000471260 ARFGAP2Q8N6H7 521 aa13.08□□□□□ -0.32
HMGN1-211ENST00000471260 OR6P1Q8NGX9 317 aa13.08□□□□□ -0.32
HMGN1-211ENST00000471260 OR5K2Q8NHB8 316 aa13.08□□□□□ -0.32
HMGN1-211ENST00000471260 C9orf43Q8TAL5 461 aaPredicted RBP13.08□□□□□ -0.32
HMGN1-211ENST00000471260 CT55Q8WUE5 264 aa13.08□□□□□ -0.32
HMGN1-211ENST00000471260 THAP4Q8WY91 577 aa13.08□□□□□ -0.32
HMGN1-211ENST00000471260 FAM129AQ9BZQ8 928 aa13.08□□□□□ -0.32
HMGN1-211ENST00000471260 IL22Q9GZX6 179 aa13.08□□□□□ -0.32
HMGN1-211ENST00000471260 CHRNA10Q9GZZ6 450 aa13.08□□□□□ -0.32
HMGN1-211ENST00000471260 OR6C2Q9NZP2 312 aa13.08□□□□□ -0.32
HMGN1-211ENST00000471260 SLC2A6Q9UGQ3 507 aa13.08□□□□□ -0.32
HMGN1-211ENST00000471260 ANAPC2Q9UJX6 822 aa13.08□□□□□ -0.32
HMGN1-211ENST00000471260 ASF1AQ9Y294 204 aa13.08□□□□□ -0.32
HMGN1-211ENST00000471260 GCN1Q92616 2671 aaKnown RBP13.07□□□□□ -0.32
HMGN1-211ENST00000471260 GOLGA6L10A0A0M3HER8 536 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 PIPSLA2A3N6 862 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 WISP1O95388 367 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 FGGP02679 453 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 ETS1P14921 441 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms