RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 TMPRSS11FQ6ZWK6 438 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 LRRTM1Q86UE6 522 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 AACSQ86V21 672 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 LACC1Q8IV20 430 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 CEP57L1Q8IYX8 460 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 KIRREL3Q8IZU9 778 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 LSMEM2Q8N112 164 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 AFAP1Q8N556 730 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 TTC39CQ8N584 583 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 MAPKAPK5-AS1Q8N8E1 139 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 AMER3Q8N944 861 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 PAPD5Q8NDF8 572 aaKnown RBP1.23□□□□□ -2.21
UBXN4-207ENST00000471246 OR13J1Q8NGT2 312 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 CCDC34Q96HJ3 373 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 OR6C1Q96RD1 312 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 FNBP1Q96RU3 617 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 PIGQQ9BRB3 760 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 FUCA2Q9BTY2 467 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 LMF2Q9BU23 707 aaKnown RBP1.23□□□□□ -2.21
UBXN4-207ENST00000471246 FNDC11Q9BVV2 318 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 NUP85Q9BW27 656 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 DGCR6LQ9BY27 220 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 S1PR5Q9H228 398 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 PPIL3Q9H2H8 161 aaKnown RBP1.23□□□□□ -2.21
UBXN4-207ENST00000471246 MYH16Q9H6N6 1097 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 RPS10P5Q9NQ39 176 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 SDR39U1Q9NRG7 319 aaPredicted RBP1.23□□□□□ -2.21
UBXN4-207ENST00000471246 SLC7A10Q9NS82 523 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 SEPT11Q9NVA2 429 aaKnown RBP1.23□□□□□ -2.21
UBXN4-207ENST00000471246 ERAP1Q9NZ08 941 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 LARSQ9P2J5 1176 aaKnown RBP1.23□□□□□ -2.21
UBXN4-207ENST00000471246 HACL1Q9UJ83 578 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 TUBE1Q9UJT0 475 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 KLK13Q9UKR3 277 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 ZHX1Q9UKY1 873 aaPredicted RBP1.23□□□□□ -2.21
UBXN4-207ENST00000471246 ZNF148Q9UQR1 794 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 GRIP1Q9Y3R0 1128 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 ANGPTL3Q9Y5C1 460 aa1.23□□□□□ -2.21
UBXN4-207ENST00000471246 COL5A2P05997 1499 aaPredicted RBP1.23□□□□□ -2.21
UBXN4-207ENST00000471246 MEX3AA1L020 520 aaKnown RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 MSGN1A6NI15 193 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 HEPACAM2A8MVW5 462 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 PALM2-AKAP2B1ALY0 433 aaPredicted RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 B4DLN1 442 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 AP3D1O14617 1153 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 PAPSS1O43252 624 aaPredicted RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 XRCC3O43542 346 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 PRAMEF11O60813 436 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 RNASEH1O60930 286 aaKnown RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 PTP4A3O75365 173 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 DFFBO76075 338 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 WDPCPO95876 746 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 ZSCAN5DPP0CG00 497 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 IGHV4-31P0DP07 118 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 UGT1A4P22310 534 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 GATA2P23769 480 aaPredicted RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 TLX1P31314 330 aaPredicted RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 SLC6A6P31641 620 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 GABRA5P31644 462 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 ACSL1P33121 698 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 PSMB10P40306 273 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 CSRP3P50461 194 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 ARSEP51690 589 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 MRPL12P52815 198 aaKnown RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 PNLIPRP2P54317 469 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 TPD52P55327 224 aaPredicted RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 GSCP56915 257 aaPredicted RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 GSDMDP57764 484 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 ARF3P61204 181 aaPredicted RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 SIRPAP78324 504 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 ARF1P84077 181 aaKnown RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 CDK3Q00526 305 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 AIMP2Q13155 320 aaKnown RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 SQLEQ14534 574 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 NR1D2Q14995 579 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 HLA-BQ31612 363 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 ITPRIPL2Q3MIP1 535 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 GLIPR1L2Q4G1C9 344 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 PHLDA2Q53GA4 152 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 KLHL26Q53HC5 615 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 FASTKD1Q53R41 847 aaKnown RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 SLC25A53Q5H9E4 307 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 SPDYCQ5MJ68 293 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 ELFN2Q5R3F8 820 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 CCDC30Q5VVM6 783 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 ZNF774Q6NX45 483 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 TEX38Q6PEX7 206 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 FIGLAQ6QHK4 219 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 Q6ZRP5 223 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 BTN2A1Q7KYR7 527 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 SH2D6Q7Z4S9 175 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 LDB1Q86U70 411 aaPredicted RBP1.22□□□□□ -2.21
UBXN4-207ENST00000471246 RTN4RL2Q86UN3 420 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 HOGA1Q86XE5 327 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 CEP57Q86XR8 500 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 LMNTD2Q8IXW0 634 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 ARHGAP24Q8N264 748 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 FBXO39Q8N4B4 442 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 MARVELD2Q8N4S9 558 aa1.22□□□□□ -2.21
UBXN4-207ENST00000471246 NIPA2Q8N8Q9 360 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms