RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 GSTM4Q03013 218 aa13.41□□□□□ -0.26
SEMA3F-208ENST00000470737 BOP1Q14137 746 aaKnown RBP13.41□□□□□ -0.26
SEMA3F-208ENST00000470737 C1orf189Q5VU69 101 aa13.41□□□□□ -0.26
SEMA3F-208ENST00000470737 ZNF385CQ66K41 422 aaPredicted RBP13.41□□□□□ -0.26
SEMA3F-208ENST00000470737 RHBDD2Q6NTF9 364 aa13.41□□□□□ -0.26
SEMA3F-208ENST00000470737 TAS2R42Q7RTR8 314 aa13.41□□□□□ -0.26
SEMA3F-208ENST00000470737 TMEM139Q8IV31 216 aa13.41□□□□□ -0.26
SEMA3F-208ENST00000470737 CDKL3Q8IVW4 592 aaPredicted RBP13.41□□□□□ -0.26
SEMA3F-208ENST00000470737 ADGRF3Q8IZF5 1079 aa13.41□□□□□ -0.26
SEMA3F-208ENST00000470737 TTC13Q8NBP0 860 aa13.41□□□□□ -0.26
SEMA3F-208ENST00000470737 C19orf43Q9BQ61 176 aa13.41□□□□□ -0.26
SEMA3F-208ENST00000470737 HEMGNQ9BXL5 484 aa13.41□□□□□ -0.26
SEMA3F-208ENST00000470737 AP1M1Q9BXS5 423 aa13.41□□□□□ -0.26
SEMA3F-208ENST00000470737 XKR8Q9H6D3 395 aa13.41□□□□□ -0.26
SEMA3F-208ENST00000470737 AGPAT4Q9NRZ5 378 aa13.41□□□□□ -0.26
SEMA3F-208ENST00000470737 FEZ2Q9UHY8 353 aaPredicted RBP13.41□□□□□ -0.26
SEMA3F-208ENST00000470737 SRPK3Q9UPE1 567 aa13.41□□□□□ -0.26
SEMA3F-208ENST00000470737 PCDHA13Q9Y5I0 950 aa13.41□□□□□ -0.26
SEMA3F-208ENST00000470737 MDC1Q14676 2089 aaKnown RBP13.41□□□□□ -0.26
SEMA3F-208ENST00000470737 KDM1AO60341 852 aa13.4□□□□□ -0.26
SEMA3F-208ENST00000470737 KLF7O75840 302 aaPredicted RBP13.4□□□□□ -0.26
SEMA3F-208ENST00000470737 CLDN1O95832 211 aa13.4□□□□□ -0.26
SEMA3F-208ENST00000470737 ACRV1P26436 265 aa13.4□□□□□ -0.26
SEMA3F-208ENST00000470737 PSMB4P28070 264 aa13.4□□□□□ -0.26
SEMA3F-208ENST00000470737 PDHA2P29803 388 aa13.4□□□□□ -0.26
SEMA3F-208ENST00000470737 SHMT2P34897 504 aa13.4□□□□□ -0.26
SEMA3F-208ENST00000470737 ADRA1AP35348 466 aa13.4□□□□□ -0.26
SEMA3F-208ENST00000470737 GLRBP48167 497 aa13.4□□□□□ -0.26
SEMA3F-208ENST00000470737 ZNF140P52738 457 aaPredicted RBP13.4□□□□□ -0.26
SEMA3F-208ENST00000470737 DEFB110Q30KQ9 67 aa13.4□□□□□ -0.26
SEMA3F-208ENST00000470737 ANKRD20A2Q5SQ80 823 aa13.4□□□□□ -0.26
SEMA3F-208ENST00000470737 ANKRD20A1Q5TYW2 823 aa13.4□□□□□ -0.26
SEMA3F-208ENST00000470737 ANKRD20A3Q5VUR7 823 aa13.4□□□□□ -0.26
SEMA3F-208ENST00000470737 TLDC1Q6P9B6 456 aa13.4□□□□□ -0.26
SEMA3F-208ENST00000470737 IGFL3Q6UXB1 125 aa13.4□□□□□ -0.26
SEMA3F-208ENST00000470737 BBS12Q6ZW61 710 aa13.4□□□□□ -0.26
SEMA3F-208ENST00000470737 SERPINA9Q86WD7 417 aa13.4□□□□□ -0.26
SEMA3F-208ENST00000470737 TXLNBQ8N3L3 684 aa13.4□□□□□ -0.26
SEMA3F-208ENST00000470737 OR2Y1Q8NGV0 311 aa13.4□□□□□ -0.26
SEMA3F-208ENST00000470737 PTERQ96BW5 349 aa13.4□□□□□ -0.26
SEMA3F-208ENST00000470737 BAG1Q99933 345 aaPredicted RBP13.4□□□□□ -0.26
SEMA3F-208ENST00000470737 TBL1YQ9BQ87 522 aa13.4□□□□□ -0.26
SEMA3F-208ENST00000470737 ATP13A2Q9NQ11 1180 aa13.4□□□□□ -0.26
SEMA3F-208ENST00000470737 P4HTMQ9NXG6 502 aa13.4□□□□□ -0.26
SEMA3F-208ENST00000470737 ASF1AQ9Y294 204 aa13.4□□□□□ -0.26
SEMA3F-208ENST00000470737 CENPEQ02224 2701 aa13.4□□□□□ -0.27
SEMA3F-208ENST00000470737 ITPR2Q14571 2701 aa13.4□□□□□ -0.27
SEMA3F-208ENST00000470737 A0A0J9YY10 115 aa13.39□□□□□ -0.27
SEMA3F-208ENST00000470737 WIPF3A6NGB9 483 aa13.39□□□□□ -0.27
SEMA3F-208ENST00000470737 QSOX1O00391 747 aa13.39□□□□□ -0.27
SEMA3F-208ENST00000470737 ZSCAN9O15535 394 aaPredicted RBP13.39□□□□□ -0.27
SEMA3F-208ENST00000470737 PJA2O43164 708 aa13.39□□□□□ -0.27
SEMA3F-208ENST00000470737 UGT2B7P16662 529 aa13.39□□□□□ -0.27
SEMA3F-208ENST00000470737 OLIG2Q13516 323 aa13.39□□□□□ -0.27
SEMA3F-208ENST00000470737 SLC9A5Q14940 896 aa13.39□□□□□ -0.27
SEMA3F-208ENST00000470737 IRAK1BP1Q5VVH5 260 aa13.39□□□□□ -0.27
SEMA3F-208ENST00000470737 DARS2Q6PI48 645 aaKnown RBP13.39□□□□□ -0.27
SEMA3F-208ENST00000470737 TRIM73Q86UV7 250 aa13.39□□□□□ -0.27
SEMA3F-208ENST00000470737 GBP5Q96PP8 586 aa13.39□□□□□ -0.27
SEMA3F-208ENST00000470737 ALS2CR12Q96Q35 445 aa13.39□□□□□ -0.27
SEMA3F-208ENST00000470737 NRTNQ99748 197 aa13.39□□□□□ -0.27
SEMA3F-208ENST00000470737 GORASP1Q9BQQ3 440 aa13.39□□□□□ -0.27
SEMA3F-208ENST00000470737 NDC1Q9BTX1 674 aa13.39□□□□□ -0.27
SEMA3F-208ENST00000470737 SPRTNQ9H040 489 aaPredicted RBP13.39□□□□□ -0.27
SEMA3F-208ENST00000470737 GOLPH3Q9H4A6 298 aa13.39□□□□□ -0.27
SEMA3F-208ENST00000470737 ZNF552Q9H707 407 aaPredicted RBP13.39□□□□□ -0.27
SEMA3F-208ENST00000470737 C10orf88Q9H8K7 445 aa13.39□□□□□ -0.27
SEMA3F-208ENST00000470737 POLG2Q9UHN1 485 aa13.39□□□□□ -0.27
SEMA3F-208ENST00000470737 ICKQ9UPZ9 632 aa13.39□□□□□ -0.27
SEMA3F-208ENST00000470737 CDYLQ9Y232 598 aa13.39□□□□□ -0.27
SEMA3F-208ENST00000470737 TDRKHQ9Y2W6 561 aaKnown RBP13.39□□□□□ -0.27
SEMA3F-208ENST00000470737 NUP210LQ5VU65 1888 aa13.39□□□□□ -0.27
SEMA3F-208ENST00000470737 PCSK5Q92824 1860 aa13.39□□□□□ -0.27
SEMA3F-208ENST00000470737 DIDO1Q9BTC0 2240 aaKnown RBP13.38□□□□□ -0.27
SEMA3F-208ENST00000470737 IGLV3-16A0A075B6K0 115 aa13.38□□□□□ -0.27
SEMA3F-208ENST00000470737 SOWAHDA6NJG2 315 aa13.38□□□□□ -0.27
SEMA3F-208ENST00000470737 CCL22O00626 93 aa13.38□□□□□ -0.27
SEMA3F-208ENST00000470737 LIN7AO14910 233 aaPredicted RBP13.38□□□□□ -0.27
SEMA3F-208ENST00000470737 KCNN4O15554 427 aa13.38□□□□□ -0.27
SEMA3F-208ENST00000470737 SNRNP200O75643 2136 aaKnown RBP13.38□□□□□ -0.27
SEMA3F-208ENST00000470737 ZNF189O75820 626 aaPredicted RBP13.38□□□□□ -0.27
SEMA3F-208ENST00000470737 AP2A2O94973 939 aa13.38□□□□□ -0.27
SEMA3F-208ENST00000470737 ITGA3P26006 1051 aa13.38□□□□□ -0.27
SEMA3F-208ENST00000470737 CETN2P41208 172 aa13.38□□□□□ -0.27
SEMA3F-208ENST00000470737 PER3P56645 1201 aa13.38□□□□□ -0.27
SEMA3F-208ENST00000470737 EIF3EP60228 445 aaKnown RBP13.38□□□□□ -0.27
SEMA3F-208ENST00000470737 COPS2P61201 443 aa13.38□□□□□ -0.27
SEMA3F-208ENST00000470737 OTUD4Q01804 1114 aaKnown RBP13.38□□□□□ -0.27
SEMA3F-208ENST00000470737 AIMP2Q13155 320 aaKnown RBP13.38□□□□□ -0.27
SEMA3F-208ENST00000470737 SYTL3Q4VX76 610 aa13.38□□□□□ -0.27
SEMA3F-208ENST00000470737 RAD9BQ6WBX8 426 aa13.38□□□□□ -0.27
SEMA3F-208ENST00000470737 UNC5AQ6ZN44 842 aa13.38□□□□□ -0.27
SEMA3F-208ENST00000470737 TBC1D21Q8IYX1 336 aa13.38□□□□□ -0.27
SEMA3F-208ENST00000470737 ZNF655Q8N720 491 aaPredicted RBP13.38□□□□□ -0.27
SEMA3F-208ENST00000470737 OR5AR1Q8NGP9 310 aa13.38□□□□□ -0.27
SEMA3F-208ENST00000470737 ACTL9Q8TC94 416 aa13.38□□□□□ -0.27
SEMA3F-208ENST00000470737 UBE2Q2Q8WVN8 375 aa13.38□□□□□ -0.27
SEMA3F-208ENST00000470737 DLG3Q92796 817 aa13.38□□□□□ -0.27
SEMA3F-208ENST00000470737 DNAJC1Q96KC8 554 aaKnown RBP13.38□□□□□ -0.27
SEMA3F-208ENST00000470737 CHRNA10Q9GZZ6 450 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms