RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 TBC1D3EA0A087X179 549 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 TBC1D3KA0A087X1G2 549 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 SERTM1A2A2V5 107 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 TBC1D3FA6NER0 549 aaPredicted RBP10.72□□□□□ -0.69
SND1-208ENST00000470463 TBC1D3LB9A6J9 549 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 PSMD12O00232 456 aaPredicted RBP10.72□□□□□ -0.69
SND1-208ENST00000470463 CACNB4O00305 520 aaPredicted RBP10.72□□□□□ -0.69
SND1-208ENST00000470463 IFRD1O00458 451 aaPredicted RBP10.72□□□□□ -0.69
SND1-208ENST00000470463 OR7A17O14581 309 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 KDM1AO60341 852 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 RNGTTO60942 597 aaKnown RBP10.72□□□□□ -0.69
SND1-208ENST00000470463 ULK1O75385 1050 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 POP7O75817 140 aaKnown RBP10.72□□□□□ -0.69
SND1-208ENST00000470463 CIB2O75838 187 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 OR4F21O95013 312 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 LMNAP02545 664 aaKnown RBP10.72□□□□□ -0.69
SND1-208ENST00000470463 PCCBP05166 539 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 TBC1D3HP0C7X1 549 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 PRR35P0CG20 571 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 ZNF8P17098 575 aaPredicted RBP10.72□□□□□ -0.69
SND1-208ENST00000470463 TSPAN8P19075 237 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 PGM1P36871 562 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 SLC6A12P48065 614 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 DGKEP52429 567 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 ERVPABLB-1P60509 514 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 ERVK-8P63133 956 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 PRKCQQ04759 706 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 DMPKQ09013 629 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 TRAF3Q13114 568 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 CCINQ13939 588 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 FASTKQ14296 549 aaKnown RBP10.72□□□□□ -0.69
SND1-208ENST00000470463 RPS6KA2Q15349 733 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 LIPJQ5W064 366 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 TBC1D3GQ6DHY5 549 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 TBC1D3CQ6IPX1 549 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 KIAA1211LQ6NV74 962 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 RPS27LQ71UM5 84 aaKnown RBP10.72□□□□□ -0.69
SND1-208ENST00000470463 LONP2Q86WA8 852 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 TRIM69Q86WT6 500 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 GALNT13Q8IUC8 556 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 CFAP206Q8IYR0 622 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 TBC1D3Q8IZP1 549 aaPredicted RBP10.72□□□□□ -0.69
SND1-208ENST00000470463 MIER2Q8N344 545 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 KIF2BQ8N4N8 673 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 RAB42Q8N4Z0 105 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 CDYL2Q8N8U2 506 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 L3MBTL4Q8NA19 623 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 KYQ8NBH2 561 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 TP53I13Q8NBR0 393 aaPredicted RBP10.72□□□□□ -0.69
SND1-208ENST00000470463 RBM15BQ8NDT2 890 aaKnown RBP10.72□□□□□ -0.69
SND1-208ENST00000470463 PRR11Q96HE9 360 aaPredicted RBP10.72□□□□□ -0.69
SND1-208ENST00000470463 SHDQ96IW2 340 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 METTL2AQ96IZ6 378 aaKnown RBP10.72□□□□□ -0.69
SND1-208ENST00000470463 PPP1R36Q96LQ0 422 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 CATSPER2Q96P56 530 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 PRRX2Q99811 253 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 MRPL1Q9BYD6 325 aaKnown RBP10.72□□□□□ -0.69
SND1-208ENST00000470463 AKTIPQ9H8T0 292 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 ACTR8Q9H981 624 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 CD248Q9HCU0 757 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 KLC4Q9NSK0 619 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 BCAP29Q9UHQ4 241 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 TSR3Q9UJK0 312 aaKnown RBP10.72□□□□□ -0.69
SND1-208ENST00000470463 PRPF19Q9UMS4 504 aaKnown RBP10.72□□□□□ -0.69
SND1-208ENST00000470463 ST14Q9Y5Y6 855 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 COL4A2P08572 1712 aa10.72□□□□□ -0.69
SND1-208ENST00000470463 A0A1W2PQU0 124 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 ARHGEF33A8MVX0 844 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 CHURC1-FNTBB4DL54 471 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 K7ESM1 405 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 CLGNO14967 610 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 PAK4O96013 591 aaPredicted RBP10.71□□□□□ -0.69
SND1-208ENST00000470463 JUNP05412 331 aaKnown RBP10.71□□□□□ -0.69
SND1-208ENST00000470463 CAPN1P07384 714 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 LINC00032P0C843 101 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 IL9P15248 144 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 ACPPP15309 386 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 OXTRP30559 389 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 HNF4AP41235 474 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 RAP1GDS1P52306 607 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 EMX2Q04743 252 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 ABRQ12979 859 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 ART3Q13508 389 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 INPP5AQ14642 412 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 ARHGAP19Q14CB8 494 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 IRF4Q15306 451 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 KIF19Q2TAC6 998 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 PTCHD3Q3KNS1 767 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 COQ5Q5HYK3 327 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 CAPN13Q6MZZ7 669 aaPredicted RBP10.71□□□□□ -0.69
SND1-208ENST00000470463 LETMD1Q6P1Q0 360 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 IL27RAQ6UWB1 636 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 MUC6Q6W4X9 2439 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 RINLQ6ZS11 566 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 TRIM46Q7Z4K8 759 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 PDZD3Q86UT5 571 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 VRK3Q8IV63 474 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 SCUBE1Q8IWY4 988 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 SNX31Q8N9S9 440 aa10.71□□□□□ -0.69
SND1-208ENST00000470463 PCYOX1LQ8NBM8 494 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms