RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 ETNK1Q9HBU6 452 aa12.84□□□□□ -0.35
CPSF4-210ENST00000469897 IMPACTQ9P2X3 320 aa12.84□□□□□ -0.35
CPSF4-210ENST00000469897 SLC2A6Q9UGQ3 507 aa12.84□□□□□ -0.35
CPSF4-210ENST00000469897 POLG2Q9UHN1 485 aa12.84□□□□□ -0.35
CPSF4-210ENST00000469897 PLAGL1Q9UM63 463 aa12.84□□□□□ -0.35
CPSF4-210ENST00000469897 SLC5A10A0PJK1 596 aa12.83□□□□□ -0.36
CPSF4-210ENST00000469897 OR2B3O76000 313 aa12.83□□□□□ -0.36
CPSF4-210ENST00000469897 GOT2P00505 430 aaKnown RBP12.83□□□□□ -0.36
CPSF4-210ENST00000469897 CHRM5P08912 532 aaPredicted RBP12.83□□□□□ -0.36
CPSF4-210ENST00000469897 OR56A5P0C7T3 313 aa12.83□□□□□ -0.36
CPSF4-210ENST00000469897 FOXN2P32314 431 aa12.83□□□□□ -0.36
CPSF4-210ENST00000469897 SHMT2P34897 504 aa12.83□□□□□ -0.36
CPSF4-210ENST00000469897 UQCRFS1P47985 274 aa12.83□□□□□ -0.36
CPSF4-210ENST00000469897 CDH17Q12864 832 aa12.83□□□□□ -0.36
CPSF4-210ENST00000469897 RAPSNQ13702 412 aa12.83□□□□□ -0.36
CPSF4-210ENST00000469897 NCF4Q15080 339 aa12.83□□□□□ -0.36
CPSF4-210ENST00000469897 DEFB110Q30KQ9 67 aa12.83□□□□□ -0.36
CPSF4-210ENST00000469897 MED25Q71SY5 747 aa12.83□□□□□ -0.36
CPSF4-210ENST00000469897 TMEM139Q8IV31 216 aa12.83□□□□□ -0.36
CPSF4-210ENST00000469897 FAM20CQ8IXL6 584 aa12.83□□□□□ -0.36
CPSF4-210ENST00000469897 TBC1D21Q8IYX1 336 aa12.83□□□□□ -0.36
CPSF4-210ENST00000469897 EFCAB3Q8N7B9 438 aa12.83□□□□□ -0.36
CPSF4-210ENST00000469897 C19orf47Q8N9M1 422 aaKnown RBP12.83□□□□□ -0.36
CPSF4-210ENST00000469897 LMNTD1Q8N9Z9 388 aa12.83□□□□□ -0.36
CPSF4-210ENST00000469897 OR13J1Q8NGT2 312 aa12.83□□□□□ -0.36
CPSF4-210ENST00000469897 FLVCR1-AS1Q8TAF5 88 aa12.83□□□□□ -0.36
CPSF4-210ENST00000469897 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.83□□□□□ -0.36
CPSF4-210ENST00000469897 HES6Q96HZ4 224 aa12.83□□□□□ -0.36
CPSF4-210ENST00000469897 ZNF778Q96MU6 729 aa12.83□□□□□ -0.36
CPSF4-210ENST00000469897 PSMG3-AS1Q96PY0 264 aa12.83□□□□□ -0.36
CPSF4-210ENST00000469897 NUDT9Q9BW91 350 aa12.83□□□□□ -0.36
CPSF4-210ENST00000469897 ZNF451Q9Y4E5 1061 aa12.83□□□□□ -0.36
CPSF4-210ENST00000469897 MAP4K5Q9Y4K4 846 aa12.83□□□□□ -0.36
CPSF4-210ENST00000469897 BLACEA4D250 179 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 ISM1B1AKI9 464 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 H3BMH7 237 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 QSOX1O00391 747 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 KLF7O75840 302 aaPredicted RBP12.82□□□□□ -0.36
CPSF4-210ENST00000469897 CEACAM4O75871 244 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 GAS8O95995 478 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 IFNB1P01574 187 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 HBQ1P09105 142 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 ETS1P14921 441 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 ADRA1DP25100 572 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 OTX2P32243 289 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 CCR7P32248 378 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 GABRA4P48169 554 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 ATP1A4Q13733 1029 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 SYTL3Q4VX76 610 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 TSTD2Q5T7W7 516 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 LYPLAL1Q5VWZ2 237 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 ZNF385CQ66K41 422 aaPredicted RBP12.82□□□□□ -0.36
CPSF4-210ENST00000469897 JMJD6Q6NYC1 403 aaPredicted RBP12.82□□□□□ -0.36
CPSF4-210ENST00000469897 PPP1R21Q6ZMI0 780 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 DNAJC22Q8N4W6 341 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 C2orf73Q8N5S3 287 aaPredicted RBP12.82□□□□□ -0.36
CPSF4-210ENST00000469897 TMEM102Q8N9M5 508 aaPredicted RBP12.82□□□□□ -0.36
CPSF4-210ENST00000469897 OR6P1Q8NGX9 317 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 OR4L1Q8NH43 312 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 OR5K2Q8NHB8 316 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 C1orf54Q8WWF1 131 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 TTC1Q99614 292 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 DPH2Q9BQC3 489 aaPredicted RBP12.82□□□□□ -0.36
CPSF4-210ENST00000469897 OR6C2Q9NZP2 312 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 LUZP4Q9P127 313 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 ZNF148Q9UQR1 794 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 KLHL20Q9Y2M5 609 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 AP1M2Q9Y6Q5 423 aa12.82□□□□□ -0.36
CPSF4-210ENST00000469897 SPTA1P02549 2419 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 A0A0J9YY10 115 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 HEATR9A2RTY3 570 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 IQCF5A8MTL0 148 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 C9J4A7 227 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 E7EVH7 732 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 LIASO43766 372 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 SUN1O94901 812 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 GP1BBP13224 206 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 FOXL2P58012 376 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 DCDP81605 110 aaKnown RBP12.81□□□□□ -0.36
CPSF4-210ENST00000469897 PLOD1Q02809 727 aaPredicted RBP12.81□□□□□ -0.36
CPSF4-210ENST00000469897 HSPA14Q0VDF9 509 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 SNX1Q13596 522 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 SEMA3AQ14563 771 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 SSPNQ14714 243 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 SLC9A5Q14940 896 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 INPP5JQ15735 1006 aaPredicted RBP12.81□□□□□ -0.36
CPSF4-210ENST00000469897 PACS1Q6VY07 963 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 ZNF534Q76KX8 674 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 LDB1Q86U70 411 aaPredicted RBP12.81□□□□□ -0.36
CPSF4-210ENST00000469897 GAS2L3Q86XJ1 694 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 VRK3Q8IV63 474 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 ZNF655Q8N720 491 aaPredicted RBP12.81□□□□□ -0.36
CPSF4-210ENST00000469897 GLIS1Q8NBF1 620 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 GALNT11Q8NCW6 608 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 CFAP61Q8NHU2 1237 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 SGSM3Q96HU1 749 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 DHRS4Q9BTZ2 278 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 AP1M1Q9BXS5 423 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 LRRC4CQ9HCJ2 640 aa12.81□□□□□ -0.36
CPSF4-210ENST00000469897 SLAMF7Q9NQ25 335 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms