RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 DCAF4L2Q8NA75 395 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 ZNF527Q8NB42 609 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 SPC24Q8NBT2 197 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 PRSS33Q8NF86 280 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 OR2T3Q8NH03 318 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 JOSD2Q8TAC2 188 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 ACTRT2Q8TDY3 377 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 TEKT4Q8WW24 435 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 RFFLQ8WZ73 363 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 RUBCNQ92622 972 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 MUL1Q969V5 352 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 ARHGEF26Q96DR7 871 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 ALS2CR12Q96Q35 445 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 HIST1H2AAQ96QV6 131 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 NUSAP1Q9BXS6 441 aaKnown RBP6.27□□□□□ -1.41
PTCD3-208ENST00000469585 CALN1Q9BXU9 219 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 ZDHHC4Q9NPG8 344 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.27□□□□□ -1.41
PTCD3-208ENST00000469585 DLGAP2Q9P1A6 1054 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 LRIT1Q9P2V4 623 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 RIMKLBQ9ULI2 386 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 FZD10Q9ULW2 581 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 USP22Q9UPT9 525 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 ERVW-1Q9UQF0 538 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 A0A0C4DFX4 3053 aa6.27□□□□□ -1.41
PTCD3-208ENST00000469585 C5orf42Q9H799 3197 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 KIF26AQ9ULI4 1882 aaPredicted RBP6.26□□□□□ -1.41
PTCD3-208ENST00000469585 CXorf51AA0A1B0GTR3 108 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 SGK1O00141 431 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 DFFAO00273 331 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 ALOX15BO15296 676 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 BUB1O43683 1085 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 LRP3O75074 770 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 IGSF6O95976 241 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 IL1BP01584 269 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 CISD3P0C7P0 127 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 TNNT1P13805 278 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 MIPP30301 263 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 CD70P32970 193 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 MAN1A1P33908 653 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 DHPSP49366 369 aaPredicted RBP6.26□□□□□ -1.41
PTCD3-208ENST00000469585 NDST2P52849 883 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 CDH6P55285 790 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 HDAC4P56524 1084 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 PITX1P78337 314 aaPredicted RBP6.26□□□□□ -1.41
PTCD3-208ENST00000469585 GALNT1Q10472 559 aaPredicted RBP6.26□□□□□ -1.41
PTCD3-208ENST00000469585 ZNF235Q14590 738 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 MESDQ14696 234 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 FUT11Q495W5 492 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 LYSMD4Q5XG99 296 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 TSSK4Q6SA08 328 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 ZNF551Q7Z340 670 aaPredicted RBP6.26□□□□□ -1.41
PTCD3-208ENST00000469585 CCDC50Q8IVM0 306 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 ATPAF2Q8N5M1 289 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 PCDH20Q8N6Y1 951 aaKnown RBP6.26□□□□□ -1.41
PTCD3-208ENST00000469585 UBL4BQ8N7F7 174 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 NIPA2Q8N8Q9 360 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 RTL3Q8N8U3 475 aaKnown RBP6.26□□□□□ -1.41
PTCD3-208ENST00000469585 MBD3L2Q8NHZ7 208 aaPredicted RBP6.26□□□□□ -1.41
PTCD3-208ENST00000469585 CEP76Q8TAP6 659 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 UBE2Q2Q8WVN8 375 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 SLC9A6Q92581 669 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 CENPIQ92674 756 aaPredicted RBP6.26□□□□□ -1.41
PTCD3-208ENST00000469585 WBP2Q969T9 261 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 PRICKLE1Q96MT3 831 aaPredicted RBP6.26□□□□□ -1.41
PTCD3-208ENST00000469585 GDAP1L1Q96MZ0 367 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 GABRG3Q99928 467 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 FEM1AQ9BSK4 669 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 CINPQ9BW66 212 aaPredicted RBP6.26□□□□□ -1.41
PTCD3-208ENST00000469585 PCED1AQ9H1Q7 454 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 SGK2Q9HBY8 427 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 SERTAD4Q9NUC0 356 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 TMEM248Q9NWD8 314 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 TAS2R14Q9NYV8 317 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 MPP6Q9NZW5 540 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 RCOR3Q9P2K3 495 aaPredicted RBP6.26□□□□□ -1.41
PTCD3-208ENST00000469585 XPO7Q9UIA9 1087 aaKnown RBP6.26□□□□□ -1.41
PTCD3-208ENST00000469585 PACSIN3Q9UKS6 424 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 PCDHGA5Q9Y5G8 931 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 R4GN57 208 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 ZDBF2Q9HCK1 2354 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 F5P12259 2224 aa6.26□□□□□ -1.41
PTCD3-208ENST00000469585 IGLV3-10A0A075B6K4 115 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 LRRD1A4D1F6 860 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 CCDC151A5D8V7 595 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 GOLGA6L9A6NEM1 432 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 PRRT4C9JH25 899 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 KPNA3O00505 521 aaPredicted RBP6.25□□□□□ -1.41
PTCD3-208ENST00000469585 MAGEC1O60732 1142 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 TCEA3O75764 348 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 PALMO75781 387 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 RNASEH2AO75792 299 aaKnown RBP6.25□□□□□ -1.41
PTCD3-208ENST00000469585 URI1O94763 535 aaPredicted RBP6.25□□□□□ -1.41
PTCD3-208ENST00000469585 PROSCO94903 275 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 RETP07949 1114 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 RBL1P28749 1068 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 HOXD12P35452 270 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 NUDT1P36639 197 aa6.25□□□□□ -1.41
PTCD3-208ENST00000469585 HSPA9P38646 679 aaKnown RBP6.25□□□□□ -1.41
PTCD3-208ENST00000469585 PSMD8P48556 350 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms