RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 USP30Q70CQ3 517 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 LRRTM4Q86VH4 590 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 HEATR4Q86WZ0 1026 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 CACUL1Q86Y37 369 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 VRK3Q8IV63 474 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 OXR1Q8N573 874 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 OR2L2Q8NH16 312 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 FBXO27Q8NI29 283 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 GANCQ8TET4 914 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 DLG3Q92796 817 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 FAM131CQ96AQ9 280 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 ROPN1LQ96C74 230 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 C3orf30Q96M34 536 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 BRINP2Q9C0B6 783 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 TUBB1Q9H4B7 451 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 DENND2DQ9H6A0 471 aaPredicted RBP9.12□□□□□ -0.95
SMC1A-205ENST00000469129 WDR26Q9H7D7 661 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 WDR41Q9HAD4 459 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 RNPEPL1Q9HAU8 725 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 PREBQ9HCU5 417 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 ZDHHC4Q9NPG8 344 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 ITM2CQ9NQX7 267 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 SDR39U1Q9NRG7 319 aaPredicted RBP9.12□□□□□ -0.95
SMC1A-205ENST00000469129 HEBP1Q9NRV9 189 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 PHPT1Q9NRX4 125 aaPredicted RBP9.12□□□□□ -0.95
SMC1A-205ENST00000469129 NOP53Q9NZM5 478 aaKnown RBP9.12□□□□□ -0.95
SMC1A-205ENST00000469129 ZIM2Q9NZV7 527 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 ATXN10Q9UBB4 475 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 FAM8A1Q9UBU6 413 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 MBD1Q9UIS9 605 aaPredicted RBP9.12□□□□□ -0.95
SMC1A-205ENST00000469129 ZNF225Q9UK10 706 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 SNX6Q9UNH7 406 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 NCKAP1Q9Y2A7 1128 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 NDUFAF1Q9Y375 327 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 ST14Q9Y5Y6 855 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 REV3LO60673 3130 aa9.12□□□□□ -0.95
SMC1A-205ENST00000469129 SPTBN5Q9NRC6 3674 aaKnown RBP9.12□□□□□ -0.95
SMC1A-205ENST00000469129 DOCK9Q9BZ29 2069 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 A0A1B0GTL3 188 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 GRXCR2A6NFK2 248 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 MGAT4DA6NG13 374 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 ARHGEF33A8MVX0 844 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 K7ESM1 405 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 IFRD1O00458 451 aaPredicted RBP9.11□□□□□ -0.95
SMC1A-205ENST00000469129 MANBAO00462 879 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 NR5A2O00482 541 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 MRASO14807 208 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 CLGNO14967 610 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 LILRB5O75023 590 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 PEX11AO75192 247 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 FKBP6O75344 327 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 ULK1O75385 1050 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 KLF8O95600 359 aaPredicted RBP9.11□□□□□ -0.95
SMC1A-205ENST00000469129 GPX3P22352 226 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 MAPK1P28482 360 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 PREPP48147 710 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 KCNK10P57789 538 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 TAS2R38P59533 333 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 CDK3Q00526 305 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 EMX2Q04743 252 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 FOXM1Q08050 763 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 SGCGQ13326 291 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 CCDC6Q16204 474 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 PTCHD3Q3KNS1 767 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 ZNF658BQ4V348 819 aaPredicted RBP9.11□□□□□ -0.95
SMC1A-205ENST00000469129 NEK5Q6P3R8 708 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 MBOAT1Q6ZNC8 495 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 TRIM74Q86UV6 250 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 DSELQ8IZU8 1212 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 ENDOVQ8N8Q3 282 aaKnown RBP9.11□□□□□ -0.95
SMC1A-205ENST00000469129 IL17RCQ8NAC3 791 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 FNDC5Q8NAU1 212 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 ASB12Q8WXK4 309 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 CDK15Q96Q40 435 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 ELOVL6Q9H5J4 265 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 RMI1Q9H9A7 625 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 FBXL12Q9NXK8 326 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 ASIC5Q9NY37 505 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 GPRC5BQ9NZH0 403 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 CCDC167Q9P0B6 97 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 KLQ9UEF7 1012 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 SLC7A8Q9UHI5 535 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 ANGPTL2Q9UKU9 493 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 EIF3LQ9Y262 564 aaKnown RBP9.11□□□□□ -0.95
SMC1A-205ENST00000469129 PTGDR2Q9Y5Y4 395 aa9.11□□□□□ -0.95
SMC1A-205ENST00000469129 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.11□□□□□ -0.95
SMC1A-205ENST00000469129 XIRP2A4UGR9 3374 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 PCM1Q15154 2024 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 A0A088AWK7 358 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 SERTM1A2A2V5 107 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 TMEM202A6NGA9 273 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 IGLON5A6NGN9 336 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 ZNF839A8K0R7 811 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 C2CD4DB7Z1M9 353 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 KMOO15229 486 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 NRP2O60462 931 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 KCNJ13O60928 360 aa9.1□□□□□ -0.95
SMC1A-205ENST00000469129 RNGTTO60942 597 aaKnown RBP9.1□□□□□ -0.95
SMC1A-205ENST00000469129 RSL1D1O76021 490 aaKnown RBP9.1□□□□□ -0.95
SMC1A-205ENST00000469129 PSMG1O95456 288 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms