RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 H2AFJQ9BTM1 129 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 MANSC1Q9H8J5 431 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 WASH6PQ9NQA3 447 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 ASB1Q9Y576 335 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 SNX11Q9Y5W9 270 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 R4GN57 208 aa17.06■□□□□ 0.32
RPL39-202ENST00000468844 EP300Q09472 2414 aaPredicted RBP17.05■□□□□ 0.32
RPL39-202ENST00000468844 NEFHP12036 1026 aa17.05■□□□□ 0.32
RPL39-202ENST00000468844 F3P13726 295 aa17.05■□□□□ 0.32
RPL39-202ENST00000468844 MAP4P27816 1152 aaKnown RBP17.05■□□□□ 0.32
RPL39-202ENST00000468844 HOXD12P35452 270 aa17.05■□□□□ 0.32
RPL39-202ENST00000468844 NAGLUP54802 743 aa17.05■□□□□ 0.32
RPL39-202ENST00000468844 AP1S2P56377 157 aa17.05■□□□□ 0.32
RPL39-202ENST00000468844 CDKL1Q00532 357 aa17.05■□□□□ 0.32
RPL39-202ENST00000468844 ZXDCQ2QGD7 858 aaPredicted RBP17.05■□□□□ 0.32
RPL39-202ENST00000468844 LRRC8CQ8TDW0 803 aa17.05■□□□□ 0.32
RPL39-202ENST00000468844 ESAMQ96AP7 390 aa17.05■□□□□ 0.32
RPL39-202ENST00000468844 EGFL8Q99944 293 aa17.05■□□□□ 0.32
RPL39-202ENST00000468844 GATA5Q9BWX5 397 aaPredicted RBP17.05■□□□□ 0.32
RPL39-202ENST00000468844 IMP3Q9NV31 184 aaKnown RBP17.05■□□□□ 0.32
RPL39-202ENST00000468844 TAAR2Q9P1P5 351 aa17.05■□□□□ 0.32
RPL39-202ENST00000468844 UNC13CQ8NB66 2214 aa17.05■□□□□ 0.32
RPL39-202ENST00000468844 LRRC14BA6NHZ5 514 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 ANXA5P08758 320 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 ARRB2P32121 409 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 LSP1P33241 339 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 AGTR2P50052 363 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 ALDH18A1P54886 795 aaKnown RBP17.04■□□□□ 0.32
RPL39-202ENST00000468844 DNAJB13P59910 316 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 HNRNPKP61978 463 aaKnown RBP eCLIP17.04■□□□□ 0.32
RPL39-202ENST00000468844 GNGT1P63211 74 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 BST1Q10588 318 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 GRB7Q14451 532 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 SETDB1Q15047 1291 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 C18orf21Q32NC0 220 aaPredicted RBP17.04■□□□□ 0.32
RPL39-202ENST00000468844 ATG14Q6ZNE5 492 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 TAF8Q7Z7C8 310 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 TRIM54Q9BYV2 358 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 ERVMER34-1Q9H9K5 563 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 MDC1Q14676 2089 aaKnown RBP17.04■□□□□ 0.32
RPL39-202ENST00000468844 STX16-NPEPL1H3BU86 382 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 STX16O14662 325 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 KLF11O14901 512 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 TAPBPO15533 448 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 IMPDH1P20839 514 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 HERVK_113P63132 956 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 RPE65Q16518 533 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 ZNF678Q5SXM1 525 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 RGS9BPQ6ZS82 235 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 RPS27LQ71UM5 84 aaKnown RBP17.04■□□□□ 0.32
RPL39-202ENST00000468844 DCUN1D3Q8IWE4 304 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 SFTPA2Q8IWL1 248 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 ZNF548Q8NEK5 533 aaPredicted RBP17.04■□□□□ 0.32
RPL39-202ENST00000468844 RAB3IL1Q8TBN0 382 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 PATE1Q8WXA2 126 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 L3HYPDHQ96EM0 354 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 TMEM79Q9BSE2 394 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 ERVK-6Q9BXR3 956 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 C20orf27Q9GZN8 174 aa17.04■□□□□ 0.32
RPL39-202ENST00000468844 PTBP2Q9UKA9 531 aaKnown RBP17.04■□□□□ 0.32
RPL39-202ENST00000468844 ASCC3Q8N3C0 2202 aaKnown RBP17.03■□□□□ 0.32
RPL39-202ENST00000468844 ZNF292O60281 2723 aa17.03■□□□□ 0.32
RPL39-202ENST00000468844 PATE3B3GLJ2 98 aa17.03■□□□□ 0.32
RPL39-202ENST00000468844 MYO1CO00159 1063 aa17.03■□□□□ 0.32
RPL39-202ENST00000468844 SHOX2O60902 331 aaPredicted RBP17.03■□□□□ 0.32
RPL39-202ENST00000468844 SDC3O75056 442 aa17.03■□□□□ 0.32
RPL39-202ENST00000468844 SLC16A8O95907 504 aa17.03■□□□□ 0.32
RPL39-202ENST00000468844 HALP42357 657 aa17.03■□□□□ 0.32
RPL39-202ENST00000468844 PRKG2Q13237 762 aa17.03■□□□□ 0.32
RPL39-202ENST00000468844 ELOCQ15369 112 aa17.03■□□□□ 0.32
RPL39-202ENST00000468844 CDKL4Q5MAI5 379 aa17.03■□□□□ 0.32
RPL39-202ENST00000468844 TBC1D21Q8IYX1 336 aa17.03■□□□□ 0.32
RPL39-202ENST00000468844 PPP1R14CQ8TAE6 165 aa17.03■□□□□ 0.32
RPL39-202ENST00000468844 LMX1AQ8TE12 382 aa17.03■□□□□ 0.32
RPL39-202ENST00000468844 SREK1Q8WXA9 508 aaKnown RBP17.03■□□□□ 0.32
RPL39-202ENST00000468844 PKP4Q99569 1192 aa17.03■□□□□ 0.32
RPL39-202ENST00000468844 C1QTNF3Q9BXJ4 246 aa17.03■□□□□ 0.32
RPL39-202ENST00000468844 SLCO1B3Q9NPD5 702 aa17.03■□□□□ 0.32
RPL39-202ENST00000468844 FSCN3Q9NQT6 498 aa17.03■□□□□ 0.32
RPL39-202ENST00000468844 ZNF624Q9P2J8 865 aaPredicted RBP17.03■□□□□ 0.32
RPL39-202ENST00000468844 TMCO1Q9UM00 188 aa17.03■□□□□ 0.32
RPL39-202ENST00000468844 PRAMEF33A0A0G2JMD5 474 aa17.02■□□□□ 0.32
RPL39-202ENST00000468844 PABPN1LA6NDY0 278 aaKnown RBP17.02■□□□□ 0.32
RPL39-202ENST00000468844 TCP11X1B4DZS4 312 aa17.02■□□□□ 0.32
RPL39-202ENST00000468844 PIAS2O75928 621 aa17.02■□□□□ 0.32
RPL39-202ENST00000468844 S100BP04271 92 aaPredicted RBP17.02■□□□□ 0.32
RPL39-202ENST00000468844 RPN2P04844 631 aa17.02■□□□□ 0.32
RPL39-202ENST00000468844 SERPINE1P05121 402 aa17.02■□□□□ 0.32
RPL39-202ENST00000468844 RPS17P08708 135 aaKnown RBP17.02■□□□□ 0.32
RPL39-202ENST00000468844 MTHFD1P11586 935 aaKnown RBP17.02■□□□□ 0.32
RPL39-202ENST00000468844 IMPA1P29218 277 aa17.02■□□□□ 0.32
RPL39-202ENST00000468844 EEF1DP29692 281 aaKnown RBP17.02■□□□□ 0.32
RPL39-202ENST00000468844 GRIK2Q13002 908 aa17.02■□□□□ 0.32
RPL39-202ENST00000468844 DUOXA1Q1HG43 343 aa17.02■□□□□ 0.32
RPL39-202ENST00000468844 SULT1C3Q6IMI6 304 aa17.02■□□□□ 0.32
RPL39-202ENST00000468844 TRIM42Q8IWZ5 723 aa17.02■□□□□ 0.32
RPL39-202ENST00000468844 NAGSQ8N159 534 aa17.02■□□□□ 0.32
RPL39-202ENST00000468844 CCNYL1Q8N7R7 359 aa17.02■□□□□ 0.32
RPL39-202ENST00000468844 RAD51AP1Q96B01 352 aa17.02■□□□□ 0.32
RPL39-202ENST00000468844 CCDC138Q96M89 665 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms