RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 PRUNE2Q8WUY3 3088 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 CFAP73A6NFT4 308 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 UBDO15205 165 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 C1orf105O95561 183 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 HGFP14210 728 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 PTPN4P29074 926 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 SLC6A12P48065 614 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 KLF10Q13118 480 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 HABP4Q5JVS0 413 aaKnown RBP18.5■□□□□ 0.55
SMC4-209ENST00000468653 XKR5Q6UX68 686 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 ZNF687Q8N1G0 1237 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 OXR1Q8N573 874 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 CPSF7Q8N684 471 aaKnown RBP18.5■□□□□ 0.55
SMC4-209ENST00000468653 SHDQ96IW2 340 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 ATG10Q9H0Y0 220 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 LRMDAQ9H2I8 198 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 TM7SF3Q9NS93 570 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 USP36Q9P275 1121 aaKnown RBP18.5■□□□□ 0.55
SMC4-209ENST00000468653 WNT16Q9UBV4 365 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 MOSPD1Q9UJG1 213 aa18.5■□□□□ 0.55
SMC4-209ENST00000468653 KLHL33A6NCF5 533 aa18.49■□□□□ 0.55
SMC4-209ENST00000468653 MYO1CO00159 1063 aa18.49■□□□□ 0.55
SMC4-209ENST00000468653 FPGTO14772 594 aa18.49■□□□□ 0.55
SMC4-209ENST00000468653 VPS4BO75351 444 aa18.49■□□□□ 0.55
SMC4-209ENST00000468653 CAPN1P07384 714 aa18.49■□□□□ 0.55
SMC4-209ENST00000468653 HMOX2P30519 316 aa18.49■□□□□ 0.55
SMC4-209ENST00000468653 CPA2P48052 419 aa18.49■□□□□ 0.55
SMC4-209ENST00000468653 ZXDCQ2QGD7 858 aaPredicted RBP18.49■□□□□ 0.55
SMC4-209ENST00000468653 CCSMST1Q4G0I0 132 aa18.49■□□□□ 0.55
SMC4-209ENST00000468653 ANO7Q6IWH7 933 aa18.49■□□□□ 0.55
SMC4-209ENST00000468653 LARP4Q71RC2 724 aaKnown RBP eCLIP18.49■□□□□ 0.554e-12■■■■□ 24.2
SMC4-209ENST00000468653 DENND6BQ8NEG7 585 aa18.49■□□□□ 0.55
SMC4-209ENST00000468653 PYCR2Q96C36 320 aa18.49■□□□□ 0.55
SMC4-209ENST00000468653 TUBGCP3Q96CW5 907 aa18.49■□□□□ 0.55
SMC4-209ENST00000468653 CMTM5Q96DZ9 223 aa18.49■□□□□ 0.55
SMC4-209ENST00000468653 PKP4Q99569 1192 aa18.49■□□□□ 0.55
SMC4-209ENST00000468653 NTMT1Q9BV86 223 aa18.49■□□□□ 0.55
SMC4-209ENST00000468653 AKTIPQ9H8T0 292 aa18.49■□□□□ 0.55
SMC4-209ENST00000468653 RMI1Q9H9A7 625 aa18.49■□□□□ 0.55
SMC4-209ENST00000468653 PRDM6Q9NQX0 595 aa18.49■□□□□ 0.55
SMC4-209ENST00000468653 DNAJC11Q9NVH1 559 aa18.49■□□□□ 0.55
SMC4-209ENST00000468653 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.49■□□□□ 0.554e-98■■■■■ 943.1
SMC4-209ENST00000468653 KRBA1A5PL33 1030 aa18.48■□□□□ 0.55
SMC4-209ENST00000468653 SEMA4FO95754 770 aa18.48■□□□□ 0.55
SMC4-209ENST00000468653 EBLN1P0CF75 366 aa18.48■□□□□ 0.55
SMC4-209ENST00000468653 ADSLP30566 484 aaPredicted RBP18.48■□□□□ 0.55
SMC4-209ENST00000468653 CLDN2P57739 230 aa18.48■□□□□ 0.55
SMC4-209ENST00000468653 SCIMPQ6UWF3 145 aa18.48■□□□□ 0.55
SMC4-209ENST00000468653 CHSY3Q70JA7 882 aa18.48■□□□□ 0.55
SMC4-209ENST00000468653 CHST15Q7LFX5 561 aaPredicted RBP18.48■□□□□ 0.55
SMC4-209ENST00000468653 MYLK4Q86YV6 388 aaPredicted RBP18.48■□□□□ 0.55
SMC4-209ENST00000468653 CHCHD4Q8N4Q1 142 aa18.48■□□□□ 0.55
SMC4-209ENST00000468653 FBXO15Q8NCQ5 510 aaPredicted RBP18.48■□□□□ 0.55
SMC4-209ENST00000468653 TSTD1Q8NFU3 115 aa18.48■□□□□ 0.55
SMC4-209ENST00000468653 CCT7Q99832 543 aa18.48■□□□□ 0.55
SMC4-209ENST00000468653 OR52A5Q9H2C5 316 aa18.48■□□□□ 0.55
SMC4-209ENST00000468653 ZNF385DQ9H6B1 395 aa18.48■□□□□ 0.55
SMC4-209ENST00000468653 LTB4R2Q9NPC1 389 aa18.48■□□□□ 0.55
SMC4-209ENST00000468653 MRGBPQ9NV56 204 aa18.48■□□□□ 0.55
SMC4-209ENST00000468653 STOX2Q9P2F5 926 aaPredicted RBP18.48■□□□□ 0.55
SMC4-209ENST00000468653 CIDEBQ9UHD4 219 aa18.48■□□□□ 0.55
SMC4-209ENST00000468653 SLC22A14Q9Y267 594 aa18.48■□□□□ 0.55
SMC4-209ENST00000468653 SLC17A4Q9Y2C5 497 aa18.48■□□□□ 0.55
SMC4-209ENST00000468653 COPG1Q9Y678 874 aaKnown RBP18.48■□□□□ 0.55
SMC4-209ENST00000468653 KANSL1LA0AUZ9 987 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 FAM170BA6NMN3 283 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 SLC22A2O15244 555 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 CEACAM5P06731 702 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 ACP5P13686 325 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 NQO1P15559 274 aaKnown RBP18.47■□□□□ 0.55
SMC4-209ENST00000468653 HNRNPA2B1P22626 353 aaKnown RBP18.47■□□□□ 0.55
SMC4-209ENST00000468653 ITPKAP23677 461 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 ACADLP28330 430 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 PRDX6P30041 224 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 KCNJ2P63252 427 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 ZP2Q05996 745 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 NAA25Q14CX7 972 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 METRNLQ641Q3 311 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 AGTRAPQ6RW13 159 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 PDZD3Q86UT5 571 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 GALNT13Q8IUC8 556 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 POU5F2Q8N7G0 328 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 ACTR8Q9H981 624 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 POLG2Q9UHN1 485 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 POM121BA6NF01 834 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 B2RBV5 119 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 GYG2O15488 501 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 CLDN9O95484 217 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 FUCA1P04066 466 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 PIK3R1P27986 724 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 MNAT1P51948 309 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 STARD6P59095 220 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 PFN3P60673 137 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 NAE1Q13564 534 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 TCHHL1Q5QJ38 904 aaPredicted RBP18.47■□□□□ 0.55
SMC4-209ENST00000468653 IL27RAQ6UWB1 636 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 UNC5DQ6UXZ4 953 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 RINLQ6ZS11 566 aa18.47■□□□□ 0.55
SMC4-209ENST00000468653 SPDYE1Q8NFV5 336 aaPredicted RBP18.47■□□□□ 0.55
SMC4-209ENST00000468653 MAGEC3Q8TD91 643 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms