RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 ITGALP20701 1170 aa12.62□□□□□ -0.39
PTPN7-207ENST00000468385 RPA4Q13156 261 aa12.62□□□□□ -0.39
PTPN7-207ENST00000468385 SLC9A5Q14940 896 aa12.62□□□□□ -0.39
PTPN7-207ENST00000468385 N4BP2L2Q92802 583 aaPredicted RBP12.62□□□□□ -0.39
PTPN7-207ENST00000468385 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.62□□□□□ -0.39
PTPN7-207ENST00000468385 PTERQ96BW5 349 aa12.62□□□□□ -0.39
PTPN7-207ENST00000468385 OR2A14Q96R47 310 aa12.62□□□□□ -0.39
PTPN7-207ENST00000468385 C19orf43Q9BQ61 176 aa12.62□□□□□ -0.39
PTPN7-207ENST00000468385 AP1M1Q9BXS5 423 aa12.62□□□□□ -0.39
PTPN7-207ENST00000468385 GOLPH3Q9H4A6 298 aa12.62□□□□□ -0.39
PTPN7-207ENST00000468385 NHEJ1Q9H9Q4 299 aaPredicted RBP12.62□□□□□ -0.39
PTPN7-207ENST00000468385 SPHK1Q9NYA1 384 aa12.62□□□□□ -0.39
PTPN7-207ENST00000468385 NDOR1Q9UHB4 597 aa12.62□□□□□ -0.39
PTPN7-207ENST00000468385 CROCCQ5TZA2 2017 aa12.62□□□□□ -0.39
PTPN7-207ENST00000468385 CCDC88CQ9P219 2028 aa12.62□□□□□ -0.39
PTPN7-207ENST00000468385 TRBV5-4A0A0C4DH59 114 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 GOLGA6L19H0YKK7 550 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 AGPSO00116 658 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 E2F3O00716 465 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 ZSCAN9O15535 394 aaPredicted RBP12.61□□□□□ -0.39
PTPN7-207ENST00000468385 PRSS56P0CW18 603 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 TPBGLP0DKB5 382 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 ACRV1P26436 265 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 PSMB4P28070 264 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 MC4RP32245 332 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 MARCKSL1P49006 195 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 CYP2A13Q16696 494 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 NKAIN1Q4KMZ8 207 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 ITPRIPL1Q6GPH6 555 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 DENND5AQ6IQ26 1287 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 UNC5AQ6ZN44 842 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 HOOK3Q86VS8 718 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 KCNMB4Q86W47 210 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 SERPINA9Q86WD7 417 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 SRRM1Q8IYB3 904 aaKnown RBP12.61□□□□□ -0.39
PTPN7-207ENST00000468385 KATNAL2Q8IYT4 538 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 ZNF655Q8N720 491 aaPredicted RBP12.61□□□□□ -0.39
PTPN7-207ENST00000468385 OR5AR1Q8NGP9 310 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 CCDC42Q96M95 316 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 WDR77Q9BQA1 342 aaPredicted RBP12.61□□□□□ -0.39
PTPN7-207ENST00000468385 VPS37BQ9H9H4 285 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 ATP13A2Q9NQ11 1180 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 AGPAT4Q9NRZ5 378 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 SLC22A11Q9NSA0 550 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 ABHD10Q9NUJ1 306 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 ZNHIT6Q9NWK9 470 aaKnown RBP12.61□□□□□ -0.39
PTPN7-207ENST00000468385 NOVA2Q9UNW9 492 aaKnown RBP12.61□□□□□ -0.39
PTPN7-207ENST00000468385 AAR2Q9Y312 384 aaKnown RBP12.61□□□□□ -0.39
PTPN7-207ENST00000468385 ALG6Q9Y672 507 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 CENPEQ02224 2701 aa12.61□□□□□ -0.39
PTPN7-207ENST00000468385 LRBAP50851 2863 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 A0A0J9YY10 115 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 H7C0C1 242 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 APOC4-APOC2K7ER74 178 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 ZRANB2O95218 330 aaKnown RBP eCLIP12.6□□□□□ -0.39
PTPN7-207ENST00000468385 APOC2P02655 101 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 CHRM5P08912 532 aaPredicted RBP12.6□□□□□ -0.39
PTPN7-207ENST00000468385 SHMT2P34897 504 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 GCGRP47871 477 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 ATP5OP48047 213 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 AIMP2Q13155 320 aaKnown RBP12.6□□□□□ -0.39
PTPN7-207ENST00000468385 HIF1AQ16665 826 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 GPR33Q49SQ1 333 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 ANKRD20A2Q5SQ80 823 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 ANKRD20A1Q5TYW2 823 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 ANKRD20A3Q5VUR7 823 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 TLDC1Q6P9B6 456 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 IGFL2Q6UWQ7 119 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 BBS12Q6ZW61 710 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 RCOR2Q8IZ40 523 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 SLC34A3Q8N130 599 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 DNAJC22Q8N4W6 341 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 CLDN19Q8N6F1 224 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 PPP4R1Q8TF05 950 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 DNAJC1Q96KC8 554 aaKnown RBP12.6□□□□□ -0.39
PTPN7-207ENST00000468385 ANP32EQ9BTT0 268 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 SLC6A20Q9NP91 592 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 TXLNGQ9NUQ3 528 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 INTUQ9ULD6 942 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 SRPK3Q9UPE1 567 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 PCM1Q15154 2024 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 POLEQ07864 2286 aa12.6□□□□□ -0.39
PTPN7-207ENST00000468385 H7C0S8 307 aa12.59□□□□□ -0.39
PTPN7-207ENST00000468385 LRRTM2O43300 516 aa12.59□□□□□ -0.39
PTPN7-207ENST00000468385 ALOX12BO75342 701 aa12.59□□□□□ -0.39
PTPN7-207ENST00000468385 GSTM1P09488 218 aa12.59□□□□□ -0.39
PTPN7-207ENST00000468385 PRF1P14222 555 aa12.59□□□□□ -0.39
PTPN7-207ENST00000468385 ITGAXP20702 1163 aa12.59□□□□□ -0.39
PTPN7-207ENST00000468385 ITGA3P26006 1051 aa12.59□□□□□ -0.39
PTPN7-207ENST00000468385 ACADLP28330 430 aa12.59□□□□□ -0.39
PTPN7-207ENST00000468385 PEBP1P30086 187 aaKnown RBP12.59□□□□□ -0.39
PTPN7-207ENST00000468385 GSTM4Q03013 218 aa12.59□□□□□ -0.39
PTPN7-207ENST00000468385 TRIM14Q14142 442 aa12.59□□□□□ -0.39
PTPN7-207ENST00000468385 ZRSR2Q15696 482 aaKnown RBP12.59□□□□□ -0.39
PTPN7-207ENST00000468385 ZNF449Q6P9G9 518 aa12.59□□□□□ -0.39
PTPN7-207ENST00000468385 CCDC50Q8IVM0 306 aa12.59□□□□□ -0.39
PTPN7-207ENST00000468385 TBL1YQ9BQ87 522 aa12.59□□□□□ -0.39
PTPN7-207ENST00000468385 HEMGNQ9BXL5 484 aa12.59□□□□□ -0.39
PTPN7-207ENST00000468385 ARNT2Q9HBZ2 717 aa12.59□□□□□ -0.39
PTPN7-207ENST00000468385 OR6C2Q9NZP2 312 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms