RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 VKORC1Q9BQB6 163 aa9.83□□□□□ -0.84
HDAC3-203ENST00000467533 MESP1Q9BRJ9 268 aa9.83□□□□□ -0.84
HDAC3-203ENST00000467533 CRB3Q9BUF7 120 aa9.83□□□□□ -0.84
HDAC3-203ENST00000467533 POLDIP3Q9BY77 421 aaKnown RBP9.83□□□□□ -0.84
HDAC3-203ENST00000467533 BPIFA1Q9NP55 256 aa9.83□□□□□ -0.84
HDAC3-203ENST00000467533 FANCLQ9NW38 375 aa9.83□□□□□ -0.84
HDAC3-203ENST00000467533 CTSFQ9UBX1 484 aa9.83□□□□□ -0.84
HDAC3-203ENST00000467533 AMACRQ9UHK6 382 aa9.83□□□□□ -0.84
HDAC3-203ENST00000467533 ACSL5Q9ULC5 683 aa9.83□□□□□ -0.84
HDAC3-203ENST00000467533 EDARQ9UNE0 448 aa9.83□□□□□ -0.84
HDAC3-203ENST00000467533 DNMT3AQ9Y6K1 912 aaPredicted RBP9.83□□□□□ -0.84
HDAC3-203ENST00000467533 FN1P02751 2386 aaKnown RBP9.83□□□□□ -0.84
HDAC3-203ENST00000467533 STAB1Q9NY15 2570 aa9.83□□□□□ -0.84
HDAC3-203ENST00000467533 NSG1A0A0A6YYJ2 146 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 A0A1B0GX78 115 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 OR5H15A6NDH6 313 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 NPIPA5E9PKD4 350 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 MATN3O15232 486 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 ZNHIT1O43257 154 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 PROM1O43490 865 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 MFSD11O43934 449 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 WFS1O76024 890 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 POLBP06746 335 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 MSX1P28360 303 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 AKT1P31749 480 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 NSG1P42857 185 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 GABRA4P48169 554 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 ALDH6A1Q02252 535 aaKnown RBP9.82□□□□□ -0.84
HDAC3-203ENST00000467533 BECN1Q14457 450 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 DPYSL2Q16555 572 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 SLC5A12Q1EHB4 618 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 KRTCAP3Q53RY4 240 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 TFDP3Q5H9I0 405 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 LDLRAP1Q5SW96 308 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 CNSTQ6PJW8 725 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 SPESP1Q6UW49 350 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 COX15Q7KZN9 410 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 DET1Q7L5Y6 550 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 POLNQ7Z5Q5 900 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 WFDC11Q8NEX6 87 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.82□□□□□ -0.84
HDAC3-203ENST00000467533 PSMF1Q92530 271 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 C8orf44Q96CB5 159 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 RBM41Q96IZ5 413 aaKnown RBP9.82□□□□□ -0.84
HDAC3-203ENST00000467533 FERD3LQ96RJ6 166 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 DMRTA2Q96SC8 542 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 NRTNQ99748 197 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 SLC26A1Q9H2B4 701 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 XKR8Q9H6D3 395 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 CBX8Q9HC52 389 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 SLC24A3Q9HC58 644 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 MAGEE1Q9HCI5 957 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.82□□□□□ -0.84
HDAC3-203ENST00000467533 STMN3Q9NZ72 180 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 NPIPA1Q9UND3 350 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 ZDHHC9Q9Y397 364 aa9.82□□□□□ -0.84
HDAC3-203ENST00000467533 INTS1Q8N201 2190 aaKnown RBP9.82□□□□□ -0.84
HDAC3-203ENST00000467533 FBN1P35555 2871 aaKnown RBP9.81□□□□□ -0.84
HDAC3-203ENST00000467533 NBEAL1Q6ZS30 2694 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 MGAT4DA6NG13 374 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 FAM171A2A8MVW0 826 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 PRRG2O14669 202 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 GPR39O43194 453 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 ZRANB2O95218 330 aaKnown RBP eCLIP9.81□□□□□ -0.84
HDAC3-203ENST00000467533 SERPINA7P05543 415 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 MMP2P08253 660 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 CARSP49589 748 aaKnown RBP9.81□□□□□ -0.84
HDAC3-203ENST00000467533 RAB28P51157 221 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 ARSFP54793 590 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 POLR2FP61218 127 aaKnown RBP9.81□□□□□ -0.84
HDAC3-203ENST00000467533 ZIC1Q15915 447 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 PPP2R5EQ16537 467 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 LONRF2Q1L5Z9 754 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 HSP90AA4PQ58FG1 418 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 ZNF766Q5HY98 468 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 ABHD17BQ5VST6 288 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 CEP128Q6ZU80 1094 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 AMIGO1Q86WK6 493 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 DOLPP1Q86YN1 238 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 LRRC49Q8IUZ0 686 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 PRSS58Q8IYP2 241 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 MCOLN2Q8IZK6 566 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 METTL27Q8N6F8 245 aaPredicted RBP9.81□□□□□ -0.84
HDAC3-203ENST00000467533 ACRBPQ8NEB7 543 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 DDHD1Q8NEL9 900 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 OR52E1Q8NGJ3 308 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 OR2L2Q8NH16 312 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 ASB5Q8WWX0 329 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 XPO4Q9C0E2 1151 aaKnown RBP9.81□□□□□ -0.84
HDAC3-203ENST00000467533 RNF32Q9H0A6 362 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 GANQ9H2C0 597 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 PARVAQ9NVD7 372 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 ZNF358Q9NW07 568 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 LRFN1Q9P244 771 aa9.81□□□□□ -0.84
HDAC3-203ENST00000467533 FAM237BA0A1B0GVD1 139 aa9.8□□□□□ -0.84
HDAC3-203ENST00000467533 ADAM10O14672 748 aa9.8□□□□□ -0.84
HDAC3-203ENST00000467533 TTI1O43156 1089 aa9.8□□□□□ -0.84
HDAC3-203ENST00000467533 BMP10O95393 424 aa9.8□□□□□ -0.84
HDAC3-203ENST00000467533 CELA2AP08217 269 aa9.8□□□□□ -0.84
HDAC3-203ENST00000467533 HOXD4P09016 255 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms