RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 FOXJ1Q92949 421 aa16■□□□□ 0.15
SLX4-202ENST00000466154 HIST1H2AHQ96KK5 128 aa16■□□□□ 0.15
SLX4-202ENST00000466154 HIST1H2AJQ99878 128 aa16■□□□□ 0.15
SLX4-202ENST00000466154 H2AFJQ9BTM1 129 aa16■□□□□ 0.15
SLX4-202ENST00000466154 CCL26Q9Y258 94 aa16■□□□□ 0.15
SLX4-202ENST00000466154 SLC22A14Q9Y267 594 aa16■□□□□ 0.15
SLX4-202ENST00000466154 CCL16O15467 120 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 TACR1P25103 407 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 GRIK2Q13002 908 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 SPIDRQ14159 915 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 TPGS2Q68CL5 300 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 SLC22A17Q8WUG5 538 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 SORCS1Q8WY21 1168 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 SGCDQ92629 289 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 INPP5KQ9BT40 448 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 MTG2Q9H4K7 406 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 CXorf21Q9HAI6 301 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 FAF1Q9UNN5 650 aaPredicted RBP15.99■□□□□ 0.15
SLX4-202ENST00000466154 DOCK6Q96HP0 2047 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.99■□□□□ 0.15
SLX4-202ENST00000466154 HS6ST1O60243 411 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 ACRP10323 421 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 BCKDHAP12694 445 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 CDH1P12830 882 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 PBLDP30039 288 aaPredicted RBP15.99■□□□□ 0.15
SLX4-202ENST00000466154 CLCN2P51788 898 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 ADARP55265 1226 aaKnown RBP15.99■□□□□ 0.15
SLX4-202ENST00000466154 GPRC6AQ5T6X5 926 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 GRAMD4Q6IC98 578 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 DPY19L3Q6ZPD9 716 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 CRIPAKQ8N1N5 446 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 PACRGLQ8N7B6 248 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 CHST14Q8NCH0 376 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 B4GALNT2Q8NHY0 566 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 ZNF296Q8WUU4 475 aaPredicted RBP15.99■□□□□ 0.15
SLX4-202ENST00000466154 GTF2H4Q92759 462 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 FAM120BQ96EK7 910 aaKnown RBP15.99■□□□□ 0.15
SLX4-202ENST00000466154 SLC47A1Q96FL8 570 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 SEZ6LQ9BYH1 1024 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 CCDC90BQ9GZT6 254 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 KIAA1522Q9P206 1035 aaPredicted RBP15.99■□□□□ 0.15
SLX4-202ENST00000466154 TMCO1Q9UM00 188 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 VPS4AQ9UN37 437 aa15.99■□□□□ 0.15
SLX4-202ENST00000466154 G3V2T6 193 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 CLDN9O95484 217 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 ARSFP54793 590 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 SH3BGRP55822 239 aaPredicted RBP15.98■□□□□ 0.15
SLX4-202ENST00000466154 SPRED1Q7Z699 444 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 HM13Q8TCT9 377 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 C12orf43Q96C57 262 aaKnown RBP15.98■□□□□ 0.15
SLX4-202ENST00000466154 ITCHQ96J02 903 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 ACPTQ9BZG2 426 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 HCFC1R1Q9NWW0 138 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 PDE10AQ9Y233 779 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 PCDHB3Q9Y5E6 796 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 PTGES3LE9PB15 166 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 ANKRD28O15084 1053 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 C1QCP02747 245 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 UMPSP11172 480 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 SRCP12931 536 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 LHCGRP22888 699 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 SNRPD1P62314 119 aaKnown RBP15.98■□□□□ 0.15
SLX4-202ENST00000466154 GTF2H3Q13889 308 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 NKG7Q16617 165 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 PTCHD3Q3KNS1 767 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 USP45Q70EL2 814 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 GALNT5Q7Z7M9 940 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 SLAIN1Q8ND83 568 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 ISOC1Q96CN7 298 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 MED8Q96G25 268 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 SLC25A37Q9NYZ2 338 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 ELOVL7A1L3X0 281 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 KLHL33A6NCF5 533 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 MYO1GB0I1T2 1018 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 SLC28A1O00337 649 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 CXCR6O00574 342 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 MAN1A2O60476 641 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 DIRAS1O95057 198 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 KRT6AP02538 564 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 KRT6BP04259 564 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 RAP2AP10114 183 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 CDK4P11802 303 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 HLA-FP30511 346 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 S100A3P33764 101 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 NSG1P42857 185 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 KRT6CP48668 564 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 CDK9P50750 372 aaKnown RBP15.98■□□□□ 0.15
SLX4-202ENST00000466154 ABRQ12979 859 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 ANKRD26P1Q6NSI1 321 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 C10orf111Q8N326 155 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 YME1L1Q96TA2 773 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 MTERF1Q99551 399 aaKnown RBP15.98■□□□□ 0.15
SLX4-202ENST00000466154 HTATIP2Q9BUP3 242 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 IL21Q9HBE4 155 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 C1orf109Q9NX04 203 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 IFT80Q9P2H3 777 aaPredicted RBP15.98■□□□□ 0.15
SLX4-202ENST00000466154 PADI4Q9UM07 663 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 PCDHB14Q9Y5E9 798 aa15.98■□□□□ 0.15
SLX4-202ENST00000466154 IFRD1O00458 451 aaPredicted RBP15.97■□□□□ 0.15
SLX4-202ENST00000466154 SERPINA1P01009 418 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms