RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 TAS2R13Q9NYV9 303 aa19.73■□□□□ 0.75
SKA3-205ENST00000465471 NINJ2Q9NZG7 142 aa19.73■□□□□ 0.75
SKA3-205ENST00000465471 RUVBL2Q9Y230 463 aaKnown RBP19.73■□□□□ 0.75
SKA3-205ENST00000465471 BTN3A3O00478 584 aa19.72■□□□□ 0.75
SKA3-205ENST00000465471 BTN3A1O00481 513 aa19.72■□□□□ 0.75
SKA3-205ENST00000465471 BRINP1O60477 761 aa19.72■□□□□ 0.75
SKA3-205ENST00000465471 PSIP1O75475 530 aaKnown RBP19.72■□□□□ 0.75
SKA3-205ENST00000465471 MPC1LP0DKB6 136 aa19.72■□□□□ 0.75
SKA3-205ENST00000465471 PKLRP30613 574 aa19.72■□□□□ 0.75
SKA3-205ENST00000465471 SHMT2P34897 504 aa19.72■□□□□ 0.75
SKA3-205ENST00000465471 PPM1FP49593 454 aaPredicted RBP19.72■□□□□ 0.75
SKA3-205ENST00000465471 DNTTIP2Q5QJE6 756 aaKnown RBP19.72■□□□□ 0.75
SKA3-205ENST00000465471 UGT3A1Q6NUS8 523 aa19.72■□□□□ 0.75
SKA3-205ENST00000465471 CYHR1Q6ZMK1 362 aa19.72■□□□□ 0.75
SKA3-205ENST00000465471 AGBL5Q8NDL9 886 aa19.72■□□□□ 0.75
SKA3-205ENST00000465471 CFAP61Q8NHU2 1237 aa19.72■□□□□ 0.75
SKA3-205ENST00000465471 MDM1Q8TC05 714 aa19.72■□□□□ 0.75
SKA3-205ENST00000465471 CD180Q99467 661 aa19.72■□□□□ 0.75
SKA3-205ENST00000465471 OLFM1Q99784 485 aa19.72■□□□□ 0.75
SKA3-205ENST00000465471 ZNF768Q9H5H4 540 aaKnown RBP19.72■□□□□ 0.75
SKA3-205ENST00000465471 XKR8Q9H6D3 395 aa19.72■□□□□ 0.75
SKA3-205ENST00000465471 TRMT6Q9UJA5 497 aaKnown RBP19.72■□□□□ 0.75
SKA3-205ENST00000465471 VWA7Q9Y334 891 aa19.72■□□□□ 0.75
SKA3-205ENST00000465471 TMEM8BA6NDV4 472 aa19.71■□□□□ 0.75
SKA3-205ENST00000465471 MATN2O00339 956 aa19.71■□□□□ 0.75
SKA3-205ENST00000465471 KIF1CO43896 1103 aaKnown RBP19.71■□□□□ 0.75
SKA3-205ENST00000465471 HGFP14210 728 aa19.71■□□□□ 0.75
SKA3-205ENST00000465471 CCNFP41002 786 aa19.71■□□□□ 0.75
SKA3-205ENST00000465471 KPNA2P52292 529 aaKnown RBP19.71■□□□□ 0.75
SKA3-205ENST00000465471 CYP4F3Q08477 520 aa19.71■□□□□ 0.75
SKA3-205ENST00000465471 NAB1Q13506 487 aa19.71■□□□□ 0.75
SKA3-205ENST00000465471 KBTBD12Q3ZCT8 623 aa19.71■□□□□ 0.75
SKA3-205ENST00000465471 UBAP2Q5T6F2 1119 aaKnown RBP19.71■□□□□ 0.75
SKA3-205ENST00000465471 IRGCQ6NXR0 463 aa19.71■□□□□ 0.75
SKA3-205ENST00000465471 CPNE9Q8IYJ1 553 aa19.71■□□□□ 0.75
SKA3-205ENST00000465471 LSMEM2Q8N112 164 aa19.71■□□□□ 0.75
SKA3-205ENST00000465471 CARFQ8N187 725 aa19.71■□□□□ 0.75
SKA3-205ENST00000465471 FBXO39Q8N4B4 442 aa19.71■□□□□ 0.75
SKA3-205ENST00000465471 BMPERQ8N8U9 685 aa19.71■□□□□ 0.75
SKA3-205ENST00000465471 GPATCH11Q8N954 259 aa19.71■□□□□ 0.75
SKA3-205ENST00000465471 KDF1Q8NAX2 398 aaPredicted RBP19.71■□□□□ 0.75
SKA3-205ENST00000465471 FBF1Q8TES7 1133 aa19.71■□□□□ 0.75
SKA3-205ENST00000465471 KLHL6Q8WZ60 621 aa19.71■□□□□ 0.75
SKA3-205ENST00000465471 FOPNLQ96NB1 174 aa19.71■□□□□ 0.75
SKA3-205ENST00000465471 SLC46A1Q96NT5 459 aa19.71■□□□□ 0.75
SKA3-205ENST00000465471 CPNE1Q99829 537 aa19.71■□□□□ 0.75
SKA3-205ENST00000465471 CDC42EP4Q9H3Q1 356 aaKnown RBP19.71■□□□□ 0.75
SKA3-205ENST00000465471 OR6C2Q9NZP2 312 aa19.71■□□□□ 0.75
SKA3-205ENST00000465471 KLHL3Q9UH77 587 aa19.71■□□□□ 0.75
SKA3-205ENST00000465471 POMT2Q9UKY4 750 aa19.71■□□□□ 0.75
SKA3-205ENST00000465471 NFU1Q9UMS0 254 aa19.71■□□□□ 0.75
SKA3-205ENST00000465471 TDRKHQ9Y2W6 561 aaKnown RBP19.71■□□□□ 0.75
SKA3-205ENST00000465471 APC2O95996 2303 aa19.7■□□□□ 0.74
SKA3-205ENST00000465471 TLCD2A6NGC4 264 aa19.7■□□□□ 0.74
SKA3-205ENST00000465471 ARHGEF33A8MVX0 844 aa19.7■□□□□ 0.74
SKA3-205ENST00000465471 CDRT15L2A8MXV6 281 aa19.7■□□□□ 0.74
SKA3-205ENST00000465471 KDM1AO60341 852 aa19.7■□□□□ 0.74
SKA3-205ENST00000465471 TSPAN12O95859 305 aa19.7■□□□□ 0.74
SKA3-205ENST00000465471 ITGA2BP08514 1039 aa19.7■□□□□ 0.74
SKA3-205ENST00000465471 POLR2CP19387 275 aaPredicted RBP19.7■□□□□ 0.74
SKA3-205ENST00000465471 MCM3P25205 808 aa19.7■□□□□ 0.74
SKA3-205ENST00000465471 ETV5P41161 510 aa19.7■□□□□ 0.74
SKA3-205ENST00000465471 BDKRB1P46663 353 aa19.7■□□□□ 0.74
SKA3-205ENST00000465471 RAB28P51157 221 aa19.7■□□□□ 0.74
SKA3-205ENST00000465471 CCSMST1Q4G0I0 132 aa19.7■□□□□ 0.74
SKA3-205ENST00000465471 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.7■□□□□ 0.74
SKA3-205ENST00000465471 SNAP47Q5SQN1 464 aa19.7■□□□□ 0.74
SKA3-205ENST00000465471 LRRC8EQ6NSJ5 796 aa19.7■□□□□ 0.74
SKA3-205ENST00000465471 PAQR3Q6TCH7 311 aa19.7■□□□□ 0.74
SKA3-205ENST00000465471 FAM92BQ6ZTR7 304 aa19.7■□□□□ 0.74
SKA3-205ENST00000465471 EIF1ADQ8N9N8 165 aaKnown RBP19.7■□□□□ 0.74
SKA3-205ENST00000465471 FBXO15Q8NCQ5 510 aaPredicted RBP19.7■□□□□ 0.74
SKA3-205ENST00000465471 SKA2Q8WVK7 121 aaPredicted RBP19.7■□□□□ 0.74
SKA3-205ENST00000465471 ASB11Q8WXH4 323 aa19.7■□□□□ 0.74
SKA3-205ENST00000465471 RAD51AP1Q96B01 352 aa19.7■□□□□ 0.74
SKA3-205ENST00000465471 VPS39Q96JC1 886 aa19.7■□□□□ 0.74
SKA3-205ENST00000465471 RBBP8Q99708 897 aa19.7■□□□□ 0.74
SKA3-205ENST00000465471 CCDC86Q9H6F5 360 aaKnown RBP19.7■□□□□ 0.74
SKA3-205ENST00000465471 SIDT1Q9NXL6 827 aaKnown RBP19.7■□□□□ 0.74
SKA3-205ENST00000465471 AKAP7Q9P0M2 348 aaPredicted RBP19.7■□□□□ 0.74
SKA3-205ENST00000465471 PLAGL1Q9UM63 463 aa19.7■□□□□ 0.74
SKA3-205ENST00000465471 AK5Q9Y6K8 562 aa19.7■□□□□ 0.74
SKA3-205ENST00000465471 FAM95CA0A1B0GW59 222 aa19.69■□□□□ 0.74
SKA3-205ENST00000465471 A8MU76 341 aa19.69■□□□□ 0.74
SKA3-205ENST00000465471 B4E171 279 aa19.69■□□□□ 0.74
SKA3-205ENST00000465471 GFYI3L273 518 aa19.69■□□□□ 0.74
SKA3-205ENST00000465471 RASGRF2O14827 1237 aa19.69■□□□□ 0.74
SKA3-205ENST00000465471 FGF3P11487 239 aaPredicted RBP19.69■□□□□ 0.74
SKA3-205ENST00000465471 CCL4P13236 92 aa19.69■□□□□ 0.74
SKA3-205ENST00000465471 ITIH1P19827 911 aa19.69■□□□□ 0.74
SKA3-205ENST00000465471 CSTF2P33240 577 aaKnown RBP eCLIP19.69■□□□□ 0.74
SKA3-205ENST00000465471 GP5P40197 560 aa19.69■□□□□ 0.74
SKA3-205ENST00000465471 TSPAN7P41732 249 aa19.69■□□□□ 0.74
SKA3-205ENST00000465471 TEX35Q5T0J7 233 aa19.69■□□□□ 0.74
SKA3-205ENST00000465471 PIWIL4Q7Z3Z4 852 aaKnown RBP19.69■□□□□ 0.74
SKA3-205ENST00000465471 CLEC14AQ86T13 490 aa19.69■□□□□ 0.74
SKA3-205ENST00000465471 LINC01555Q8NAE3 123 aa19.69■□□□□ 0.74
SKA3-205ENST00000465471 FLVCR1-AS1Q8TAF5 88 aa19.69■□□□□ 0.74
SKA3-205ENST00000465471 EEF1AKMT1Q8WVE0 214 aa19.69■□□□□ 0.74
SKA3-205ENST00000465471 UBXN4Q92575 508 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms