RNA–Protein interactions for RNA: ENST00000463672.1

GGA1-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 3

Gene GGA1, Length 367 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-217	ENST00000463672	UBAP2L	Q14157	1087 aa	Known RBP	13.74	□□□□□ -0.21
GGA1-217	ENST00000463672	NCF4	Q15080	339 aa		13.74	□□□□□ -0.21
GGA1-217	ENST00000463672	CCDC38	Q502W7	563 aa		13.74	□□□□□ -0.21
GGA1-217	ENST00000463672	AARS2	Q5JTZ9	985 aa	Known RBP	13.74	□□□□□ -0.21
GGA1-217	ENST00000463672	PRAMEF17	Q5VTA0	474 aa		13.74	□□□□□ -0.21
GGA1-217	ENST00000463672	CPZ	Q66K79	652 aa		13.74	□□□□□ -0.21
GGA1-217	ENST00000463672	MED25	Q71SY5	747 aa		13.74	□□□□□ -0.21
GGA1-217	ENST00000463672	RAB43	Q86YS6	212 aa		13.74	□□□□□ -0.21
GGA1-217	ENST00000463672	TAB3	Q8N5C8	712 aa	Predicted RBP	13.74	□□□□□ -0.21
GGA1-217	ENST00000463672	TMEM102	Q8N9M5	508 aa	Predicted RBP	13.74	□□□□□ -0.21
GGA1-217	ENST00000463672	OR13J1	Q8NGT2	312 aa		13.74	□□□□□ -0.21
GGA1-217	ENST00000463672	ATG4A	Q8WYN0	398 aa		13.74	□□□□□ -0.21
GGA1-217	ENST00000463672	SGSM3	Q96HU1	749 aa		13.74	□□□□□ -0.21
GGA1-217	ENST00000463672	MLXIPL	Q9NP71	852 aa		13.74	□□□□□ -0.21
GGA1-217	ENST00000463672	SRPK3	Q9UPE1	567 aa		13.74	□□□□□ -0.21
GGA1-217	ENST00000463672	ZNF148	Q9UQR1	794 aa		13.74	□□□□□ -0.21
GGA1-217	ENST00000463672	PRSS21	Q9Y6M0	314 aa		13.74	□□□□□ -0.21
GGA1-217	ENST00000463672	PIKFYVE	Q9Y2I7	2098 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	CLEC18A	A5D8T8	446 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	OR51F1	A6NGY5	319 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	ZNF749	O43361	778 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	KRT86	O43790	486 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	CEACAM4	O75871	244 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	OR2B3	O76000	313 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	GOT2	P00505	430 aa	Known RBP	13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	IFNB1	P01574	187 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	PDGFA	P04085	211 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	CAPN1	P07384	714 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	CHRM5	P08912	532 aa	Predicted RBP	13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	PVR	P15151	417 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	PRAME	P78395	509 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	KIR2DS3	Q14952	304 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	BRD3	Q15059	726 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	SLC5A12	Q1EHB4	618 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	FASTKD1	Q53R41	847 aa	Known RBP	13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	DNAJC21	Q5F1R6	531 aa	Known RBP	13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	TSTD2	Q5T7W7	516 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	RHBDD2	Q6NTF9	364 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	CLEC18B	Q6UXF7	455 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	UNC5A	Q6ZN44	842 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	EFCAB3	Q8N7B9	438 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	CCDC89	Q8N998	374 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	CLEC18C	Q8NCF0	446 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	OR4L1	Q8NH43	312 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	PROKR1	Q8TCW9	393 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	HDAC10	Q969S8	669 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	IP6K3	Q96PC2	410 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	OR2A14	Q96R47	310 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	KLHL25	Q9H0H3	589 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	ETNK1	Q9HBU6	452 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	PAK5	Q9P286	719 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	ANKMY1	Q9P2S6	941 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	ANAPC5	Q9UJX4	755 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	PLAA	Q9Y263	795 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	TDRKH	Q9Y2W6	561 aa	Known RBP	13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	ZNF451	Q9Y4E5	1061 aa		13.73	□□□□□ -0.21
GGA1-217	ENST00000463672	RELN	P78509	3460 aa		13.72	□□□□□ -0.21
GGA1-217	ENST00000463672	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.72	□□□□□ -0.21
GGA1-217	ENST00000463672	DPM1	O60762	260 aa		13.72	□□□□□ -0.21
GGA1-217	ENST00000463672	VPS4B	O75351	444 aa		13.72	□□□□□ -0.21
GGA1-217	ENST00000463672	CCL11	P51671	97 aa		13.72	□□□□□ -0.21
GGA1-217	ENST00000463672	CHAF1B	Q13112	559 aa		13.72	□□□□□ -0.21
GGA1-217	ENST00000463672	PTCHD3	Q3KNS1	767 aa		13.72	□□□□□ -0.21
GGA1-217	ENST00000463672	ZNF385C	Q66K41	422 aa	Predicted RBP	13.72	□□□□□ -0.21
GGA1-217	ENST00000463672	LCN10	Q6JVE6	187 aa		13.72	□□□□□ -0.21
GGA1-217	ENST00000463672	C4orf22	Q6V702	233 aa		13.72	□□□□□ -0.21
GGA1-217	ENST00000463672	MICALCL	Q6ZW33	695 aa		13.72	□□□□□ -0.21
GGA1-217	ENST00000463672	SLC13A5	Q86YT5	568 aa	Predicted RBP	13.72	□□□□□ -0.21
GGA1-217	ENST00000463672	SLC22A15	Q8IZD6	547 aa		13.72	□□□□□ -0.21
GGA1-217	ENST00000463672	FAM26E	Q8N5C1	309 aa		13.72	□□□□□ -0.21
GGA1-217	ENST00000463672	PPHLN1	Q8NEY8	458 aa	Known RBP	13.72	□□□□□ -0.21
GGA1-217	ENST00000463672	ASZ1	Q8WWH4	475 aa		13.72	□□□□□ -0.21
GGA1-217	ENST00000463672	SLC22A18	Q96BI1	424 aa		13.72	□□□□□ -0.21
GGA1-217	ENST00000463672	NRTN	Q99748	197 aa		13.72	□□□□□ -0.21
GGA1-217	ENST00000463672	CASS4	Q9NQ75	786 aa		13.72	□□□□□ -0.21
GGA1-217	ENST00000463672	RAB6B	Q9NRW1	208 aa		13.72	□□□□□ -0.21
GGA1-217	ENST00000463672	GPN3	Q9UHW5	284 aa	Predicted RBP	13.72	□□□□□ -0.21
GGA1-217	ENST00000463672	VPS4A	Q9UN37	437 aa		13.72	□□□□□ -0.21
GGA1-217	ENST00000463672	TCAF1	Q9Y4C2	921 aa		13.72	□□□□□ -0.21
GGA1-217	ENST00000463672	COL12A1	Q99715	3063 aa		13.71	□□□□□ -0.21
GGA1-217	ENST00000463672		A0A0U1RQJ8	604 aa		13.71	□□□□□ -0.21
GGA1-217	ENST00000463672	TTLL8	A6PVC2	850 aa		13.71	□□□□□ -0.21
GGA1-217	ENST00000463672	AP3B1	O00203	1094 aa		13.71	□□□□□ -0.21
GGA1-217	ENST00000463672	ZSCAN9	O15535	394 aa	Predicted RBP	13.71	□□□□□ -0.21
GGA1-217	ENST00000463672	KLHL41	O60662	606 aa		13.71	□□□□□ -0.21
GGA1-217	ENST00000463672	IGHE	P01854	428 aa		13.71	□□□□□ -0.21
GGA1-217	ENST00000463672	APOA4	P06727	396 aa		13.71	□□□□□ -0.21
GGA1-217	ENST00000463672	APRT	P07741	180 aa		13.71	□□□□□ -0.21
GGA1-217	ENST00000463672	TTPA	P49638	278 aa		13.71	□□□□□ -0.21
GGA1-217	ENST00000463672	RAB28	P51157	221 aa		13.71	□□□□□ -0.21
GGA1-217	ENST00000463672	MLLT10	P55197	1068 aa		13.71	□□□□□ -0.21
GGA1-217	ENST00000463672	TMED2	Q15363	201 aa		13.71	□□□□□ -0.21
GGA1-217	ENST00000463672	TLDC1	Q6P9B6	456 aa		13.71	□□□□□ -0.21
GGA1-217	ENST00000463672	UNC5D	Q6UXZ4	953 aa		13.71	□□□□□ -0.21
GGA1-217	ENST00000463672	TRIM73	Q86UV7	250 aa		13.71	□□□□□ -0.21
GGA1-217	ENST00000463672	DCUN1D3	Q8IWE4	304 aa		13.71	□□□□□ -0.21
GGA1-217	ENST00000463672	GLIS1	Q8NBF1	620 aa		13.71	□□□□□ -0.21
GGA1-217	ENST00000463672	OR6P1	Q8NGX9	317 aa		13.71	□□□□□ -0.21
GGA1-217	ENST00000463672	DENND1A	Q8TEH3	1009 aa		13.71	□□□□□ -0.21
GGA1-217	ENST00000463672	CARD6	Q9BX69	1037 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms