RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 CELA2AP08217 269 aa12.75□□□□□ -0.37
C9orf3-211ENST00000463372 CXCR2P25025 360 aa12.75□□□□□ -0.37
C9orf3-211ENST00000463372 NDUFS1P28331 727 aa12.75□□□□□ -0.37
C9orf3-211ENST00000463372 HTR7P34969 479 aa12.75□□□□□ -0.37
C9orf3-211ENST00000463372 ME1P48163 572 aa12.75□□□□□ -0.37
C9orf3-211ENST00000463372 ARSEP51690 589 aa12.75□□□□□ -0.37
C9orf3-211ENST00000463372 ARSFP54793 590 aa12.75□□□□□ -0.37
C9orf3-211ENST00000463372 SLC25A35Q3KQZ1 300 aa12.75□□□□□ -0.37
C9orf3-211ENST00000463372 PDLIM3Q53GG5 364 aaPredicted RBP12.75□□□□□ -0.37
C9orf3-211ENST00000463372 ALS2CLQ60I27 953 aa12.75□□□□□ -0.37
C9orf3-211ENST00000463372 TMTC1Q8IUR5 882 aa12.75□□□□□ -0.37
C9orf3-211ENST00000463372 LCN9Q8WX39 176 aa12.75□□□□□ -0.37
C9orf3-211ENST00000463372 CENPIQ92674 756 aaPredicted RBP12.75□□□□□ -0.37
C9orf3-211ENST00000463372 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.75□□□□□ -0.371e-8■■■■■ 41.2
C9orf3-211ENST00000463372 SCMH1Q96GD3 660 aa12.75□□□□□ -0.37
C9orf3-211ENST00000463372 TTC25Q96NG3 672 aa12.75□□□□□ -0.37
C9orf3-211ENST00000463372 INSM2Q96T92 566 aaPredicted RBP12.75□□□□□ -0.37
C9orf3-211ENST00000463372 SCAND2PQ9GZW5 306 aaPredicted RBP12.75□□□□□ -0.37
C9orf3-211ENST00000463372 RIC8BQ9NVN3 520 aa12.75□□□□□ -0.37
C9orf3-211ENST00000463372 C2orf74A8MZ97 194 aa12.74□□□□□ -0.37
C9orf3-211ENST00000463372 HCRTR1O43613 425 aa12.74□□□□□ -0.37
C9orf3-211ENST00000463372 DNAJB6O75190 326 aa12.74□□□□□ -0.37
C9orf3-211ENST00000463372 ONECUT2O95948 504 aa12.74□□□□□ -0.37
C9orf3-211ENST00000463372 CTSBP07858 339 aa12.74□□□□□ -0.37
C9orf3-211ENST00000463372 CYP11B1P15538 503 aa12.74□□□□□ -0.37
C9orf3-211ENST00000463372 CDH5P33151 784 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-211ENST00000463372 CHRNA4P43681 627 aa12.74□□□□□ -0.37
C9orf3-211ENST00000463372 KLC1Q07866 573 aa12.74□□□□□ -0.37
C9orf3-211ENST00000463372 C10orf62Q5T681 223 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-211ENST00000463372 PDPK2PQ6A1A2 396 aa12.74□□□□□ -0.37
C9orf3-211ENST00000463372 HIST2H2BDQ6DRA6 164 aa12.74□□□□□ -0.37
C9orf3-211ENST00000463372 KIAA0930Q6ICG6 404 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-211ENST00000463372 GJB7Q6PEY0 223 aa12.74□□□□□ -0.37
C9orf3-211ENST00000463372 COX15Q7KZN9 410 aa12.74□□□□□ -0.37
C9orf3-211ENST00000463372 NLRP9Q7RTR0 991 aa12.74□□□□□ -0.37
C9orf3-211ENST00000463372 GALNTL5Q7Z4T8 443 aa12.74□□□□□ -0.37
C9orf3-211ENST00000463372 BEND7Q8N7W2 519 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-211ENST00000463372 MDS2Q8NDY4 140 aa12.74□□□□□ -0.37
C9orf3-211ENST00000463372 PIGTQ969N2 578 aa12.74□□□□□ -0.37
C9orf3-211ENST00000463372 SIGLEC12Q96PQ1 595 aa12.74□□□□□ -0.37
C9orf3-211ENST00000463372 PIP5K1AQ99755 562 aa12.74□□□□□ -0.37
C9orf3-211ENST00000463372 NUP85Q9BW27 656 aa12.74□□□□□ -0.37
C9orf3-211ENST00000463372 ZFYVE1Q9HBF4 777 aa12.74□□□□□ -0.37
C9orf3-211ENST00000463372 C3orf18Q9UK00 162 aa12.74□□□□□ -0.37
C9orf3-211ENST00000463372 DSCAMO60469 2012 aa12.73□□□□□ -0.37
C9orf3-211ENST00000463372 VSTM2BA6NLU5 285 aa12.73□□□□□ -0.37
C9orf3-211ENST00000463372 BTN3A1O00481 513 aa12.73□□□□□ -0.37
C9orf3-211ENST00000463372 RASGRF2O14827 1237 aa12.73□□□□□ -0.37
C9orf3-211ENST00000463372 DAPK3O43293 454 aa12.73□□□□□ -0.37
C9orf3-211ENST00000463372 TP53P04637 393 aaPredicted RBP12.73□□□□□ -0.37
C9orf3-211ENST00000463372 ICAM2P13598 275 aa12.73□□□□□ -0.37
C9orf3-211ENST00000463372 SYT1P21579 422 aa12.73□□□□□ -0.37
C9orf3-211ENST00000463372 UGT1A1P22309 533 aa12.73□□□□□ -0.37
C9orf3-211ENST00000463372 OCA2Q04671 838 aa12.73□□□□□ -0.37
C9orf3-211ENST00000463372 EEF1A2Q05639 463 aaKnown RBP12.73□□□□□ -0.37
C9orf3-211ENST00000463372 KRTAP1-1Q07627 177 aa12.73□□□□□ -0.37
C9orf3-211ENST00000463372 TUBA3CQ13748 450 aa12.73□□□□□ -0.37
C9orf3-211ENST00000463372 NFE2L1Q14494 772 aa12.73□□□□□ -0.37
C9orf3-211ENST00000463372 GSE1Q14687 1217 aa12.73□□□□□ -0.37
C9orf3-211ENST00000463372 OR1C1Q15619 314 aa12.73□□□□□ -0.37
C9orf3-211ENST00000463372 TUBA3EQ6PEY2 450 aa12.73□□□□□ -0.37
C9orf3-211ENST00000463372 FAM83HQ6ZRV2 1179 aaPredicted RBP12.73□□□□□ -0.37
C9orf3-211ENST00000463372 WDR53Q7Z5U6 358 aaPredicted RBP12.73□□□□□ -0.37
C9orf3-211ENST00000463372 ARHGAP12Q8IWW6 846 aa12.73□□□□□ -0.37
C9orf3-211ENST00000463372 PRSS58Q8IYP2 241 aa12.73□□□□□ -0.37
C9orf3-211ENST00000463372 TRAM1L1Q8N609 369 aa12.73□□□□□ -0.37
C9orf3-211ENST00000463372 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.73□□□□□ -0.37
C9orf3-211ENST00000463372 LRRC46Q96FV0 321 aa12.73□□□□□ -0.37
C9orf3-211ENST00000463372 UTP23Q9BRU9 249 aaKnown RBP12.73□□□□□ -0.37
C9orf3-211ENST00000463372 WWP1Q9H0M0 922 aa12.73□□□□□ -0.37
C9orf3-211ENST00000463372 LRTM1Q9HBL6 345 aa12.73□□□□□ -0.37
C9orf3-211ENST00000463372 FZD10Q9ULW2 581 aa12.73□□□□□ -0.37
C9orf3-211ENST00000463372 PCDHA7Q9UN72 937 aa12.73□□□□□ -0.37
C9orf3-211ENST00000463372 IGHV1-45A0A0A0MS14 117 aa12.72□□□□□ -0.37
C9orf3-211ENST00000463372 C2CD4BA6NLJ0 364 aa12.72□□□□□ -0.37
C9orf3-211ENST00000463372 A8MUI8 341 aa12.72□□□□□ -0.37
C9orf3-211ENST00000463372 BTN3A3O00478 584 aa12.72□□□□□ -0.37
C9orf3-211ENST00000463372 TFECO14948 347 aaPredicted RBP12.72□□□□□ -0.37
C9orf3-211ENST00000463372 CDC40O60508 579 aaKnown RBP eCLIP12.72□□□□□ -0.374e-7■■■■□ 25.7
C9orf3-211ENST00000463372 PRMT3O60678 531 aa12.72□□□□□ -0.37
C9orf3-211ENST00000463372 POP7O75817 140 aaKnown RBP12.72□□□□□ -0.37
C9orf3-211ENST00000463372 FAM157CP0CG43 387 aa12.72□□□□□ -0.37
C9orf3-211ENST00000463372 TACR1P25103 407 aa12.72□□□□□ -0.37
C9orf3-211ENST00000463372 GABRA4P48169 554 aa12.72□□□□□ -0.37
C9orf3-211ENST00000463372 TMEM115Q12893 351 aaPredicted RBP12.72□□□□□ -0.37
C9orf3-211ENST00000463372 CAMK4Q16566 473 aa12.72□□□□□ -0.37
C9orf3-211ENST00000463372 KHDC1Q4VXA5 237 aaKnown RBP12.72□□□□□ -0.37
C9orf3-211ENST00000463372 SPINK14Q6IE38 97 aa12.72□□□□□ -0.37
C9orf3-211ENST00000463372 BEST3Q8N1M1 668 aa12.72□□□□□ -0.37
C9orf3-211ENST00000463372 HORMAD2Q8N7B1 307 aa12.72□□□□□ -0.37
C9orf3-211ENST00000463372 ACVR1CQ8NER5 493 aa12.72□□□□□ -0.37
C9orf3-211ENST00000463372 GDAP1Q8TB36 358 aa12.72□□□□□ -0.37
C9orf3-211ENST00000463372 NSMCE1Q8WV22 266 aa12.72□□□□□ -0.37
C9orf3-211ENST00000463372 MIEF2Q96C03 454 aa12.72□□□□□ -0.37
C9orf3-211ENST00000463372 PERPQ96FX8 193 aa12.72□□□□□ -0.37
C9orf3-211ENST00000463372 LYSMD1Q96S90 227 aa12.72□□□□□ -0.37
C9orf3-211ENST00000463372 ANKRD10Q9NXR5 420 aa12.72□□□□□ -0.37
C9orf3-211ENST00000463372 CHKBQ9Y259 395 aa12.72□□□□□ -0.37
C9orf3-211ENST00000463372 CLCA1A8K7I4 914 aa12.71□□□□□ -0.37
C9orf3-211ENST00000463372 EEF2KO00418 725 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms