RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 TCAF1Q9Y4C2 921 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 MYO18BQ8IUG5 2567 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 TENM4Q6N022 2769 aa8.87□□□□□ -0.99
BRCA1-207ENST00000461798 ASH1LQ9NR48 2969 aaKnown RBP8.87□□□□□ -0.99
BRCA1-207ENST00000461798 CCDC78A2IDD5 438 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 GSAPA4D1B5 854 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 CDC14CA4D256 554 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 H3BMH7 237 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 MKRN2OSH3BPM6 223 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 OR1I1O60431 355 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 GPC4O75487 556 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 RFPL1O75677 317 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 CAPN1P07384 714 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 APRTP07741 180 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 CCR7P32248 378 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 GABRA4P48169 554 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 NPY2RP49146 381 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 LMAN1P49257 510 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 TLE1Q04724 770 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 ABRQ12979 859 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 SNX1Q13596 522 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 LACTB2Q53H82 288 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-207ENST00000461798 FASTKD1Q53R41 847 aaKnown RBP8.86□□□□□ -0.99
BRCA1-207ENST00000461798 DNAJC21Q5F1R6 531 aaKnown RBP8.86□□□□□ -0.99
BRCA1-207ENST00000461798 ARMC3Q5W041 872 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 SPESP1Q6UW49 350 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 TREML4Q6UXN2 200 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 UNC5AQ6ZN44 842 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 PRUNE1Q86TP1 453 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 SLC22A15Q8IZD6 547 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 CCDC89Q8N998 374 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 OR5AR1Q8NGP9 310 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 OR6P1Q8NGX9 317 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 ADAMTS17Q8TE56 1095 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 MAIP1Q8WWC4 291 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 ASZ1Q8WWH4 475 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 MR1Q95460 341 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 TCTN2Q96GX1 697 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 OR2A14Q96R47 310 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 RUFY1Q96T51 708 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 DPH2Q9BQC3 489 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-207ENST00000461798 TLR10Q9BXR5 811 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 AP1M1Q9BXS5 423 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 NLNQ9BYT8 704 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 XKR8Q9H6D3 395 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 ACTR5Q9H9F9 607 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-207ENST00000461798 MLXIPLQ9NP71 852 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 ZNF71Q9NQZ8 489 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-207ENST00000461798 HOMER3Q9NSC5 361 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 TREX1Q9NSU2 369 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 PCMTD2Q9NV79 361 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 TLK1Q9UKI8 766 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 CDYLQ9Y232 598 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 ASF1AQ9Y294 204 aa8.86□□□□□ -0.99
BRCA1-207ENST00000461798 SETXQ7Z333 2677 aaKnown RBP8.85□□□□□ -0.99
BRCA1-207ENST00000461798 TMEM150CB9EJG8 249 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 PYCARD-AS1I3L0S3 204 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 PRMT5O14744 637 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-207ENST00000461798 KDM1AO60341 852 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 SLCO2B1O94956 709 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 CHRM5P08912 532 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-207ENST00000461798 HBQ1P09105 142 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 CCDC175P0C221 793 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 ZSCAN5DPP0CG00 497 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 PVRP15151 417 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 UGT2B7P16662 529 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 ITGA1P56199 1179 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 PRAMEP78395 509 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 CDK16Q00536 496 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 KLRB1Q12918 225 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 SEMA3AQ14563 771 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 KIR2DS3Q14952 304 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 KYNUQ16719 465 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 SLC5A12Q1EHB4 618 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 AARS2Q5JTZ9 985 aaKnown RBP8.85□□□□□ -0.99
BRCA1-207ENST00000461798 PRAMEF17Q5VTA0 474 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 PAPD7Q5XG87 772 aaKnown RBP8.85□□□□□ -0.99
BRCA1-207ENST00000461798 ZNF385CQ66K41 422 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-207ENST00000461798 LCN10Q6JVE6 187 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 CDHR3Q6ZTQ4 885 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 TMEM135Q86UB9 458 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 LRRC8AQ8IWT6 810 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 MPP5Q8N3R9 675 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 PPHLN1Q8NEY8 458 aaKnown RBP8.85□□□□□ -0.99
BRCA1-207ENST00000461798 TRIM58Q8NG06 486 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 HGH1Q9BTY7 390 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 KIFC1Q9BW19 673 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 TSSK1BQ9BXA7 367 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 IL22Q9GZX6 179 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 EPN3Q9H201 632 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 P2RY12Q9H244 342 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 MRM3Q9HC36 420 aaKnown RBP8.85□□□□□ -0.99
BRCA1-207ENST00000461798 FAM60AQ9NP50 221 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 CHRAC1Q9NRG0 131 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 ENAMQ9NRM1 1142 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 SPHK1Q9NYA1 384 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 BFARQ9NZS9 450 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 MAN2B2Q9Y2E5 1009 aa8.85□□□□□ -0.99
BRCA1-207ENST00000461798 PCDHGA9Q9Y5G4 932 aaKnown RBP8.85□□□□□ -0.99
BRCA1-207ENST00000461798 AP1M2Q9Y6Q5 423 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms