RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-229	ENST00000460826	DEPDC7	Q96QD5	511 aa		13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	PARD6B	Q9BYG5	372 aa		13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	TFB2M	Q9H5Q4	396 aa	Known RBP	13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	IKZF3	Q9UKT9	509 aa		13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	ENTPD2	Q9Y5L3	495 aa		13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	IGHV5-10-1	A0A0J9YXX1	117 aa		13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	OR5K3	A6NET4	321 aa		13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	AGRP	O00253	132 aa		13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	EIF3F	O00303	357 aa	Predicted RBP	13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	BTN3A1	O00481	513 aa		13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	PHGDH	O43175	533 aa	Known RBP	13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	PSIP1	O75475	530 aa	Known RBP	13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	WISP3	O95389	354 aa	Predicted RBP	13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	ITGA2B	P08514	1039 aa		13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	CBSL	P0DN79	551 aa		13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	GCA	P28676	217 aa		13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	CBS	P35520	551 aa		13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	GMPR	P36959	345 aa		13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	POU4F1	Q01851	419 aa		13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	ZFP36L1	Q07352	338 aa	Known RBP	13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	SLC29A2	Q14542	456 aa		13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	USP10	Q14694	798 aa	Known RBP	13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	TMEM71	Q6P5X7	295 aa		13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	DCUN1D3	Q8IWE4	304 aa		13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	CACTIN-AS1	Q8N1I8	211 aa		13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	AEN	Q8WTP8	325 aa	Known RBP	13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	ANKRD49	Q8WVL7	239 aa		13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	SLC44A1	Q8WWI5	657 aa		13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	ASB11	Q8WXH4	323 aa		13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	DLG3	Q92796	817 aa		13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	FOPNL	Q96NB1	174 aa		13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	PAFAH2	Q99487	392 aa		13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	MENT	Q9BUN1	341 aa		13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	ZMYND15	Q9H091	742 aa		13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	EPB41L1	Q9H4G0	881 aa		13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	KLHL3	Q9UH77	587 aa		13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	POLG2	Q9UHN1	485 aa		13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	ADAMTS6	Q9UKP5	1117 aa		13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	MN1	Q10571	1320 aa	Predicted RBP	13.59	□□□□□ -0.23
HDLBP-229	ENST00000460826	IGF2R	P11717	2491 aa		13.58	□□□□□ -0.23
HDLBP-229	ENST00000460826	SPTB	P11277	2137 aa		13.58	□□□□□ -0.23
HDLBP-229	ENST00000460826		A0A1W2PNU3	283 aa	Predicted RBP	13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	PMS2P1	A4D2B8	440 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	FAM221B	A6H8Z2	402 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	POC1B-GALNT4	F8VUJ3	575 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	GFY	I3L273	518 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	CAPN5	O15484	640 aa	Predicted RBP	13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	KIF1C	O43896	1103 aa	Known RBP	13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	C9	P02748	559 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	THRA	P10827	490 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	ZNF37A	P17032	561 aa	Predicted RBP	13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	POLR2C	P19387	275 aa	Predicted RBP	13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	PKLR	P30613	574 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	RGS4	P49798	205 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	INHBC	P55103	352 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	CAMK2B	Q13554	666 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	C16orf72	Q14CZ0	275 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	ZKSCAN8	Q15776	578 aa	Predicted RBP	13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	CLPP	Q16740	277 aa	Predicted RBP	13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	SNAP47	Q5SQN1	464 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	PHF19	Q5T6S3	580 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	IRGC	Q6NXR0	463 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	WDR74	Q6RFH5	385 aa	Predicted RBP	13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	CMC1	Q7Z7K0	106 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	AMIGO1	Q86WK6	493 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	ADGRF3	Q8IZF5	1079 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	RCBTB1	Q8NDN9	531 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	OR4D9	Q8NGE8	314 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	DENND1A	Q8TEH3	1009 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	DCAKD	Q8WVC6	231 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	CCDC74B	Q96LY2	380 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	PPM1M	Q96MI6	270 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	TGM7	Q96PF1	710 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	SRMS	Q9H3Y6	488 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	HRASLS2	Q9NWW9	162 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	PDP2	Q9P2J9	529 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	HEATR5B	Q9P2D3	2071 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	FRY	Q5TBA9	3013 aa		13.58	□□□□□ -0.24
HDLBP-229	ENST00000460826	TPR	P12270	2363 aa	Known RBP	13.57	□□□□□ -0.24
HDLBP-229	ENST00000460826	EXOC1L	A0A1B0GW35	172 aa		13.57	□□□□□ -0.24
HDLBP-229	ENST00000460826		A8MU76	341 aa		13.57	□□□□□ -0.24
HDLBP-229	ENST00000460826	RPN2	P04844	631 aa		13.57	□□□□□ -0.24
HDLBP-229	ENST00000460826	PEBP1	P30086	187 aa	Known RBP	13.57	□□□□□ -0.24
HDLBP-229	ENST00000460826	CCKBR	P32239	447 aa		13.57	□□□□□ -0.24
HDLBP-229	ENST00000460826	CCNF	P41002	786 aa		13.57	□□□□□ -0.24
HDLBP-229	ENST00000460826	KPNA2	P52292	529 aa	Known RBP	13.57	□□□□□ -0.24
HDLBP-229	ENST00000460826	SLC12A2	P55011	1212 aa		13.57	□□□□□ -0.24
HDLBP-229	ENST00000460826	IL2	P60568	153 aa		13.57	□□□□□ -0.24
HDLBP-229	ENST00000460826	ILF2	Q12905	390 aa	Known RBP	13.57	□□□□□ -0.24
HDLBP-229	ENST00000460826	MROH9	Q5TGP6	573 aa		13.57	□□□□□ -0.24
HDLBP-229	ENST00000460826	FBXO38	Q6PIJ6	1188 aa		13.57	□□□□□ -0.24
HDLBP-229	ENST00000460826	FAM92B	Q6ZTR7	304 aa		13.57	□□□□□ -0.24
HDLBP-229	ENST00000460826	UBE2R2	Q712K3	238 aa	Predicted RBP	13.57	□□□□□ -0.24
HDLBP-229	ENST00000460826	OOSP2	Q86WS3	158 aa		13.57	□□□□□ -0.24
HDLBP-229	ENST00000460826	MYO1H	Q8N1T3	1032 aa		13.57	□□□□□ -0.24
HDLBP-229	ENST00000460826	C2orf73	Q8N5S3	287 aa	Predicted RBP	13.57	□□□□□ -0.24
HDLBP-229	ENST00000460826	LINC01555	Q8NAE3	123 aa		13.57	□□□□□ -0.24
HDLBP-229	ENST00000460826	UBLCP1	Q8WVY7	318 aa	Predicted RBP	13.57	□□□□□ -0.24
HDLBP-229	ENST00000460826	RAD51AP1	Q96B01	352 aa		13.57	□□□□□ -0.24

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