RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.16□□□□□ -2.06
SYPL1-203ENST00000460770 C17orf47Q8NEP4 570 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 GPRC5AQ8NFJ5 357 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 OR6S1Q8NH40 331 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 MIPOL1Q8TD10 442 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 RNF128Q8TEB7 428 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 LRRC15Q8TF66 581 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 ZFAND2BQ8WV99 257 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 ZKSCAN4Q969J2 545 aaPredicted RBP2.16□□□□□ -2.06
SYPL1-203ENST00000460770 TOMM40LQ969M1 308 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 ZUFSPQ96AP4 578 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 SKA1Q96BD8 255 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 ATP13A3Q9H7F0 1226 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 PREBQ9HCU5 417 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 MBNL1Q9NR56 388 aaKnown RBP2.16□□□□□ -2.06
SYPL1-203ENST00000460770 SDR39U1Q9NRG7 319 aaPredicted RBP2.16□□□□□ -2.06
SYPL1-203ENST00000460770 NDE1Q9NXR1 346 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 SPHK1Q9NYA1 384 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 GGA3Q9NZ52 723 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 NPAP1Q9NZP6 1156 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 ZNF69Q9UC07 566 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 CLIP2Q9UDT6 1046 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 CMAHPQ9Y471 501 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 PCNX3Q9H6A9 2034 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 ARHGEF40Q8TER5 1519 aa2.16□□□□□ -2.06
SYPL1-203ENST00000460770 PRSS51A0A1B0GVH4 220 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 A0A1W2PPR1 153 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 ANKRD61A6NGH8 418 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 GAPDHSO14556 408 aaPredicted RBP2.15□□□□□ -2.07
SYPL1-203ENST00000460770 EPHB6O15197 1021 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 PYGLP06737 847 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 LDHCP07864 332 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 DUX4L4P0CJ87 422 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 TNFAIP3P21580 790 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 CASP2P42575 452 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 NKX2-1P43699 371 aaPredicted RBP2.15□□□□□ -2.07
SYPL1-203ENST00000460770 RPS3AP61247 264 aaKnown RBP2.15□□□□□ -2.07
SYPL1-203ENST00000460770 CALCOCO2Q13137 446 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 DDX10Q13206 875 aaKnown RBP2.15□□□□□ -2.07
SYPL1-203ENST00000460770 KRT33BQ14525 404 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 OLFML2AQ68BL7 652 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 SEL1L3Q68CR1 1132 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 NOTUMQ6P988 496 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 CPLX4Q7Z7G2 160 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 PDILTQ8N807 584 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.15□□□□□ -2.07
SYPL1-203ENST00000460770 Q8NBF4 154 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 PAPD5Q8NDF8 572 aaKnown RBP2.15□□□□□ -2.07
SYPL1-203ENST00000460770 VANGL1Q8TAA9 524 aaPredicted RBP2.15□□□□□ -2.07
SYPL1-203ENST00000460770 TBC1D16Q8TBP0 767 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 SMAP2Q8WU79 429 aaPredicted RBP2.15□□□□□ -2.07
SYPL1-203ENST00000460770 CCDC107Q8WV48 283 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 AZIN2Q96A70 460 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 CCDC34Q96HJ3 373 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 TBATAQ96M53 351 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 AGAP4Q96P64 663 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 PANK2Q9BZ23 570 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 RTN4RQ9BZR6 473 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 VN1R1Q9GZP7 353 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 MIS12Q9H081 205 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 CHMP1AQ9HD42 196 aaPredicted RBP2.15□□□□□ -2.07
SYPL1-203ENST00000460770 PANK4Q9NVE7 773 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 GRIP1Q9Y3R0 1128 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.15□□□□□ -2.07
SYPL1-203ENST00000460770 SESN1Q9Y6P5 492 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 SMCHD1A6NHR9 2005 aa2.15□□□□□ -2.07
SYPL1-203ENST00000460770 ACOD1A6NK06 481 aa2.14□□□□□ -2.07
SYPL1-203ENST00000460770 J3KRW8 73 aa2.14□□□□□ -2.07
SYPL1-203ENST00000460770 SSX4O60224 188 aa2.14□□□□□ -2.07
SYPL1-203ENST00000460770 DDX58O95786 925 aaKnown RBP2.14□□□□□ -2.07
SYPL1-203ENST00000460770 CLEC3BP05452 202 aa2.14□□□□□ -2.07
SYPL1-203ENST00000460770 NMBRP28336 390 aa2.14□□□□□ -2.07
SYPL1-203ENST00000460770 HLA-FP30511 346 aa2.14□□□□□ -2.07
SYPL1-203ENST00000460770 OPRL1P41146 370 aa2.14□□□□□ -2.07
SYPL1-203ENST00000460770 LEPRP48357 1165 aaKnown RBP2.14□□□□□ -2.07
SYPL1-203ENST00000460770 CASP6P55212 293 aa2.14□□□□□ -2.07
SYPL1-203ENST00000460770 GUCY2DQ02846 1103 aa2.14□□□□□ -2.07
SYPL1-203ENST00000460770 KIF6Q6ZMV9 814 aa2.14□□□□□ -2.07
SYPL1-203ENST00000460770 INTS8Q75QN2 995 aaKnown RBP2.14□□□□□ -2.07
SYPL1-203ENST00000460770 ADCK1Q86TW2 530 aa2.14□□□□□ -2.07
SYPL1-203ENST00000460770 KCNMB4Q86W47 210 aa2.14□□□□□ -2.07
SYPL1-203ENST00000460770 HPS6Q86YV9 775 aa2.14□□□□□ -2.07
SYPL1-203ENST00000460770 GPD1LQ8N335 351 aa2.14□□□□□ -2.07
SYPL1-203ENST00000460770 METTL4Q8N3J2 472 aa2.14□□□□□ -2.07
SYPL1-203ENST00000460770 MAPKAPK5-AS1Q8N8E1 139 aa2.14□□□□□ -2.07
SYPL1-203ENST00000460770 HJURPQ8NCD3 748 aaPredicted RBP2.14□□□□□ -2.07
SYPL1-203ENST00000460770 NAXEQ8NCW5 288 aa2.14□□□□□ -2.07
SYPL1-203ENST00000460770 OR13C3Q8NGS6 347 aa2.14□□□□□ -2.07
SYPL1-203ENST00000460770 PHLDA1Q8WV24 401 aaPredicted RBP2.14□□□□□ -2.07
SYPL1-203ENST00000460770 RRP36Q96EU6 259 aaKnown RBP2.14□□□□□ -2.07
SYPL1-203ENST00000460770 ELMOD3Q96FG2 381 aa2.14□□□□□ -2.07
SYPL1-203ENST00000460770 PPM1MQ96MI6 270 aa2.14□□□□□ -2.07
SYPL1-203ENST00000460770 PRICKLE1Q96MT3 831 aaPredicted RBP2.14□□□□□ -2.07
SYPL1-203ENST00000460770 WDFY2Q96P53 400 aa2.14□□□□□ -2.07
SYPL1-203ENST00000460770 OR2A14Q96R47 310 aa2.14□□□□□ -2.07
SYPL1-203ENST00000460770 GAD1Q99259 594 aa2.14□□□□□ -2.07
SYPL1-203ENST00000460770 NKX3-1Q99801 234 aaPredicted RBP2.14□□□□□ -2.07
SYPL1-203ENST00000460770 NUP85Q9BW27 656 aa2.14□□□□□ -2.07
SYPL1-203ENST00000460770 AGXT2Q9BYV1 514 aa2.14□□□□□ -2.07
SYPL1-203ENST00000460770 CPVLQ9H3G5 476 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms