RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 AASSQ9UDR5 926 aa6.09□□□□□ -1.43
VPS13D-202ENST00000460333 MAFFQ9ULX9 164 aa6.09□□□□□ -1.43
VPS13D-202ENST00000460333 USP3Q9Y6I4 520 aa6.09□□□□□ -1.43
VPS13D-202ENST00000460333 TEX264Q9Y6I9 313 aa6.09□□□□□ -1.43
VPS13D-202ENST00000460333 STON1Q9Y6Q2 735 aa6.09□□□□□ -1.43
VPS13D-202ENST00000460333 KIAA0100Q14667 2235 aaKnown RBP6.09□□□□□ -1.43
VPS13D-202ENST00000460333 C12orf71A8MTZ7 269 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 PLD2O14939 933 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 SLITRK5O94991 958 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 FTH1P02794 183 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 IRF1P10914 325 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 FOSL2P15408 326 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 TPH1P17752 444 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 GSTM2P28161 218 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 PPP2R1BP30154 601 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 MAGEA6P43360 314 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 PLK1P53350 603 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 GPX6P59796 221 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 TIGD6Q17RP2 521 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 MBLAC2Q68D91 279 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 MSANTD2Q6P1R3 559 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 KIF18BQ86Y91 864 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 STK40Q8N2I9 435 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 MEIOBQ8N635 442 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 TTC29Q8NA56 475 aaPredicted RBP6.09□□□□□ -1.44
VPS13D-202ENST00000460333 SLC43A3Q8NBI5 491 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 RNASE11Q8TAA1 199 aaKnown RBP6.09□□□□□ -1.44
VPS13D-202ENST00000460333 CANT1Q8WVQ1 401 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 AKAP1Q92667 903 aaKnown RBP eCLIP6.09□□□□□ -1.44
VPS13D-202ENST00000460333 TSGA13Q96PP4 275 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 ZSCAN5AQ9BUG6 496 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 CLPBQ9H078 707 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 FKBP14Q9NWM8 211 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 CMTM6Q9NX76 183 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 MED11Q9P086 117 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 EBF1Q9UH73 591 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 TSR3Q9UJK0 312 aaKnown RBP6.09□□□□□ -1.44
VPS13D-202ENST00000460333 ST14Q9Y5Y6 855 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 BACE2Q9Y5Z0 518 aa6.09□□□□□ -1.44
VPS13D-202ENST00000460333 MTMR11A4FU01 709 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 SLC30A4O14863 429 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 CASKO14936 926 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 MRPS14O60783 128 aaKnown RBP6.08□□□□□ -1.44
VPS13D-202ENST00000460333 CLDN11O75508 207 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 REM1O75628 298 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 PIAS1O75925 651 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 KLHL18O94889 574 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 METTL18O95568 372 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 TOP3BO95985 862 aaKnown RBP6.08□□□□□ -1.44
VPS13D-202ENST00000460333 GLUD1P00367 558 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 FABP3P05413 133 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 HNRNPLP14866 589 aaKnown RBP eCLIP6.08□□□□□ -1.44
VPS13D-202ENST00000460333 NR4A1P22736 598 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 IL4RP24394 825 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 ALDH6A1Q02252 535 aaKnown RBP6.08□□□□□ -1.44
VPS13D-202ENST00000460333 EIF2B5Q13144 721 aaKnown RBP6.08□□□□□ -1.44
VPS13D-202ENST00000460333 CDH18Q13634 790 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 E2F2Q14209 437 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 TBRG1Q3YBR2 411 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 GCNT7Q6ZNI0 430 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 PTCHD4Q6ZW05 846 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 GPRIN1Q7Z2K8 1008 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 SLC15A4Q8N697 577 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 ZNF557Q8N988 423 aaPredicted RBP6.08□□□□□ -1.44
VPS13D-202ENST00000460333 ZMIZ2Q8NF64 920 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 CREB3L1Q96BA8 519 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 SLC38A2Q96QD8 506 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 TEFMQ96QE5 360 aaKnown RBP6.08□□□□□ -1.44
VPS13D-202ENST00000460333 COPS4Q9BT78 406 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 ATXN3LQ9H3M9 355 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 OXSMQ9NWU1 459 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 LYVE1Q9Y5Y7 322 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 ARPC2O15144 300 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 PRAMEF1O95521 474 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 FGF19O95750 216 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 NPPAP01160 153 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 PRKCHP24723 683 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 RABGGTBP53611 331 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 UGT2B15P54855 530 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 RING1Q06587 406 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 GPM6BQ13491 265 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 PFKFB4Q16877 469 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 KCTD19Q17RG1 926 aaPredicted RBP6.08□□□□□ -1.44
VPS13D-202ENST00000460333 LHX8Q68G74 356 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 HACD2Q6Y1H2 254 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 CYS1Q717R9 158 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 UTS2BQ765I0 119 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 PHC2Q8IXK0 858 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 ZNF671Q8TAW3 534 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 SAMD11Q96NU1 681 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 FCRL5Q96RD9 977 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 HERC2P3Q9BVR0 1158 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 LRRC3Q9BY71 257 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 CERS4Q9HA82 394 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 SEMA4BQ9NPR2 832 aaPredicted RBP6.08□□□□□ -1.44
VPS13D-202ENST00000460333 PDP1Q9P0J1 537 aaPredicted RBP6.08□□□□□ -1.44
VPS13D-202ENST00000460333 ZNHIT2Q9UHR6 403 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 OR14I1A6ND48 311 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 H7C2Y5 167 aa6.08□□□□□ -1.44
VPS13D-202ENST00000460333 ACSL4O60488 711 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms