RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 IFT27Q9BW83 186 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 C1orf21Q9H246 121 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 ANKRA2Q9H9E1 313 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 UNC13CQ8NB66 2214 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 A0A0G2JMP0 313 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 B8ZZF3 427 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 F8VP50 259 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 USP12O75317 370 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 LYPLA2O95372 231 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 EPCAMP16422 314 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 CTPS1P17812 591 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 MPP2Q14168 576 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 LIN52Q52LA3 116 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 PRAMEF17Q5VTA0 474 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 C9orf57Q5W0N0 161 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 LINGO2Q7L985 606 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 GPR142Q7Z601 462 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 OR4M2Q8NGB6 313 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 TMEM168Q9H0V1 697 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 PRAMEF33A0A0G2JMD5 474 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 ARL5CA6NH57 179 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 PRAMEF10O60809 474 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 SASH3O75995 380 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 NDST3O95803 873 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 HMGN1P05114 100 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 GOT1P17174 413 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 CASP6P55212 293 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 DUSP4Q13115 394 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 SGCBQ16585 318 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 TIGD2Q4W5G0 525 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 P2RY8Q86VZ1 359 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 SPERTQ8NA61 448 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 OR10H4Q8NGA5 316 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 OR52K2Q8NGK3 314 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 CDCA5Q96FF9 252 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 SLC35G5Q96KT7 338 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 FBXO5Q9UKT4 447 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 ZFC3H1O60293 1989 aaKnown RBP8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 A0A1W2PQ45 241 aaPredicted RBP8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 A0A1W2PQY0 241 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 EPHX1P07099 455 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 GABRR2P28476 465 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 SHMT1P34896 483 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 SLC6A9P48067 706 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 BEX3Q00994 111 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 TTMPQ5BVD1 217 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 ASB12Q8WXK4 309 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 C8orf48Q96LL4 319 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 ST6GALNAC4Q9H4F1 302 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 KLF15Q9UIH9 416 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 MAP4K5Q9Y4K4 846 aa8.75□□□□□ -1.01
SHROOM4-203ENST00000460112 RHOQP17081 205 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 MLLT3P42568 568 aaPredicted RBP8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 MAGEA12P43365 314 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 NDST2P52849 883 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 TXNL4AP83876 142 aaKnown RBP8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 SEC23BQ15437 767 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 ERI1Q8IV48 349 aaKnown RBP8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 OR14C36Q8NHC7 312 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 VANGL1Q8TAA9 524 aaPredicted RBP8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 RCN3Q96D15 328 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 GPR88Q9GZN0 384 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 H6PDO95479 791 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 MPIP34949 423 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 PLGLB1Q02325 96 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 CDKL4Q5MAI5 379 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 ZYG11AQ6WRX3 759 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 CATSPERGQ6ZRH7 1159 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 ZNF709Q8N972 641 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 RNF38Q9H0F5 515 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 CLEC3AO75596 197 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 HOXB9P17482 250 aaPredicted RBP8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 ITPKAP23677 461 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 PGDP52209 483 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 YBEYP58557 167 aaPredicted RBP8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 SLC25A3Q00325 362 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 PCDH1Q08174 1060 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 TUSC3Q13454 348 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 PLEKHN1Q494U1 663 aaPredicted RBP8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 PIGZQ86VD9 579 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 CSPG4P5Q96PW8 444 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 TBL1XR1Q9BZK7 514 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 ADAM7Q9H2U9 754 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 IFT52Q9Y366 437 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 IFI30P13284 250 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 RHBDL3P58872 404 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 IFI35P80217 286 aaPredicted RBP8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 GAD2Q05329 585 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 LRRC32Q14392 662 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 RFTN1Q14699 578 aaPredicted RBP8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 USP30Q70CQ3 517 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 KCNK18Q7Z418 384 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 C12orf40Q86WS4 652 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 KLHL6Q8WZ60 621 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 EXOSC8Q96B26 276 aaKnown RBP8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 BCL7BQ9BQE9 202 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 GLOD4Q9HC38 313 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 ABCD2Q9UBJ2 740 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 NPIPA5E9PKD4 350 aa8.74□□□□□ -1.01
SHROOM4-203ENST00000460112 NUMBP49757 651 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms