RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 KLHL3Q9UH77 587 aa12.46□□□□□ -0.41
COL18A1-206ENST00000459895 ADAMTS6Q9UKP5 1117 aa12.46□□□□□ -0.41
COL18A1-206ENST00000459895 MTO1Q9Y2Z2 717 aaKnown RBP12.46□□□□□ -0.41
COL18A1-206ENST00000459895 NEUROG3Q9Y4Z2 214 aa12.46□□□□□ -0.41
COL18A1-206ENST00000459895 FREM2Q5SZK8 3169 aa12.46□□□□□ -0.42
COL18A1-206ENST00000459895 SNRNP200O75643 2136 aaKnown RBP12.46□□□□□ -0.42
COL18A1-206ENST00000459895 KIF26BQ2KJY2 2108 aa12.46□□□□□ -0.42
COL18A1-206ENST00000459895 A0A087WUV0 522 aaPredicted RBP12.45□□□□□ -0.42
COL18A1-206ENST00000459895 FAM221BA6H8Z2 402 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 OR6C74A6NCV1 312 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 EIF3FO00303 357 aaPredicted RBP12.45□□□□□ -0.42
COL18A1-206ENST00000459895 BTN3A3O00478 584 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 CAPN5O15484 640 aaPredicted RBP12.45□□□□□ -0.42
COL18A1-206ENST00000459895 ZW10O43264 779 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 C9P02748 559 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 ITGA2BP08514 1039 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 MPC1LP0DKB6 136 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 CBSLP0DN79 551 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 PEBP1P30086 187 aaKnown RBP12.45□□□□□ -0.42
COL18A1-206ENST00000459895 SHMT2P34897 504 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 CBSP35520 551 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 GMPRP36959 345 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 SHC2P98077 582 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 CAMK2BQ13554 666 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 NAA30Q147X3 362 aaPredicted RBP12.45□□□□□ -0.42
COL18A1-206ENST00000459895 C16orf72Q14CZ0 275 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 CLPPQ16740 277 aaPredicted RBP12.45□□□□□ -0.42
COL18A1-206ENST00000459895 C3orf38Q5JPI3 329 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 SNAP47Q5SQN1 464 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 UGT3A1Q6NUS8 523 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 IRGCQ6NXR0 463 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 WDR93Q6P2C0 686 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 WDR74Q6RFH5 385 aaPredicted RBP12.45□□□□□ -0.42
COL18A1-206ENST00000459895 TAX1BP1Q86VP1 789 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 LINC01555Q8NAE3 123 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 DENND1AQ8TEH3 1009 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 AENQ8WTP8 325 aaKnown RBP12.45□□□□□ -0.42
COL18A1-206ENST00000459895 EEF1AKMT1Q8WVE0 214 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 UBXN4Q92575 508 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 LIN37Q96GY3 246 aaPredicted RBP12.45□□□□□ -0.42
COL18A1-206ENST00000459895 SRMSQ9H3Y6 488 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 TFB2MQ9H5Q4 396 aaKnown RBP12.45□□□□□ -0.42
COL18A1-206ENST00000459895 IKZF3Q9UKT9 509 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 ANGPTL2Q9UKU9 493 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 SLC39A10Q9ULF5 831 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 VWA7Q9Y334 891 aa12.45□□□□□ -0.42
COL18A1-206ENST00000459895 EXOC1LA0A1B0GW35 172 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 HMX2A2RU54 273 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 GSAPA4D1B5 854 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 NPEPPSL1A6NEC2 478 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 RASGRF2O14827 1237 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 KIF1CO43896 1103 aaKnown RBP12.44□□□□□ -0.42
COL18A1-206ENST00000459895 CATP04040 527 aaKnown RBP12.44□□□□□ -0.42
COL18A1-206ENST00000459895 JUPP14923 745 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 AMD1P17707 334 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 POLR2CP19387 275 aaPredicted RBP12.44□□□□□ -0.42
COL18A1-206ENST00000459895 GCAP28676 217 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 SPRP35270 261 aaPredicted RBP12.44□□□□□ -0.42
COL18A1-206ENST00000459895 RGS4P49798 205 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 RAB28P51157 221 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 KPNA2P52292 529 aaKnown RBP12.44□□□□□ -0.42
COL18A1-206ENST00000459895 POU4F1Q01851 419 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 ZFP36L1Q07352 338 aaKnown RBP12.44□□□□□ -0.42
COL18A1-206ENST00000459895 SP140Q13342 867 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 SQSTM1Q13501 440 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 GRTP1Q5TC63 336 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 LRRC8EQ6NSJ5 796 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 TMEM71Q6P5X7 295 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 CCNI2Q6ZMN8 369 aaPredicted RBP12.44□□□□□ -0.42
COL18A1-206ENST00000459895 FAM92BQ6ZTR7 304 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 PRSS42Q7Z5A4 293 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 AMIGO1Q86WK6 493 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 ADGRF3Q8IZF5 1079 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 MYO1HQ8N1T3 1032 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 OR4E2Q8NGC2 313 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 DCAKDQ8WVC6 231 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 ANKRD49Q8WVL7 239 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 ZFPM2Q8WW38 1151 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 SLC44A1Q8WWI5 657 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 DLG3Q92796 817 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 PPM1MQ96MI6 270 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 FOPNLQ96NB1 174 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 TMEM74Q96NL1 305 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 POPDC3Q9HBV1 291 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 POLG2Q9UHN1 485 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 POMT2Q9UKY4 750 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 SATB2Q9UPW6 733 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 CEP295Q9C0D2 2601 aa12.44□□□□□ -0.42
COL18A1-206ENST00000459895 CCDC187A0A096LP49 1063 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 TLCD2A6NGC4 264 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 A8MU76 341 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 POC1B-GALNT4F8VUJ3 575 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 MYO1CO00159 1063 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 INHBAP08476 426 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 CHRM5P08912 532 aaPredicted RBP12.43□□□□□ -0.42
COL18A1-206ENST00000459895 ANKRD34CP0C6C1 535 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 SLC35E2BP0CK96 405 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 ERGP11308 486 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 HGFP14210 728 aa12.43□□□□□ -0.42
COL18A1-206ENST00000459895 PSMB5P28074 263 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms