RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.05□□□□□ -2.08
NEDD1-204ENST00000457368 CSAG2Q9Y5P2 127 aa2.05□□□□□ -2.08
NEDD1-204ENST00000457368 DYTNA2CJ06 578 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 ASPDHA6ND91 283 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 OR5K3A6NET4 321 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 GOLGA8SH3BPF8 625 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 MATN2O00339 956 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 KIF1CO43896 1103 aaKnown RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 SLC19A2O60779 497 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 CTAG2O75638 210 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 TOXO94900 526 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 ZNF202O95125 648 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 VIPP01282 170 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 ESR1P03372 595 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 UMODP07911 640 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 EBLN1P0CF75 366 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 TFE3P19532 575 aaPredicted RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 AGXTP21549 392 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 UGT1A4P22310 534 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 DNASE1P24855 282 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 MST1P26927 711 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 GPR1P46091 355 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 RGRP47804 291 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 NUMBP49757 651 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 SEPHS1P49903 392 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 TNFSF10P50591 281 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 GSCP56915 257 aaPredicted RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 RPL26P61254 145 aaKnown RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 RABEP1Q15276 862 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 CFAP58Q5T655 872 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 ATL3Q6DD88 541 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 RAET1GQ6H3X3 334 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 PRSS57Q6UWY2 283 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 PAMR1Q6UXH9 720 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 NAPRTQ6XQN6 538 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 TRIM72Q6ZMU5 477 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 C22orf34Q6ZV56 151 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 Q6ZVL8 140 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 SPPL2CQ8IUH8 684 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 TMEM126BQ8IUX1 230 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 PHYKPLQ8IUZ5 450 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 CHERPQ8IWX8 916 aaKnown RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 LRRC75A-AS1Q8N1F1 130 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 CPLX3Q8WVH0 158 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 KAT5Q92993 513 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 MFSD3Q96ES6 412 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 NSMCE3Q96MG7 304 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 GPR137Q96N19 417 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 SECISBP2Q96T21 854 aaKnown RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 ZNF559Q9BR84 538 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 PITPNM3Q9BZ71 974 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 KLC2Q9H0B6 622 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 BLZF1Q9H2G9 400 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 UPF2Q9HAU5 1272 aaKnown RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 PLCB1Q9NQ66 1216 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 CCM2LQ9NUG4 571 aaPredicted RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 BEX4Q9NWD9 120 aaPredicted RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 STMN3Q9NZ72 180 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 OR12D3Q9UGF7 316 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 RPL26L1Q9UNX3 145 aaKnown RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 EFR3BQ9Y2G0 817 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 PCYT1BQ9Y5K3 369 aaPredicted RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 AP1M2Q9Y6Q5 423 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 ABCA4P78363 2273 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 DOCK4Q8N1I0 1966 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 ACANP16112 2415 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 CELSR1Q9NYQ6 3014 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 CRYBG3Q68DQ2 2970 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 SOCS6O14544 535 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 SMAD7O15105 426 aaKnown RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 POLR2DO15514 142 aaKnown RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 FGF10O15520 208 aaPredicted RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 KLK8O60259 260 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 PRAMEF2O60811 474 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 TRIM13O60858 407 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 RASSF9O75901 435 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 USP1O94782 785 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 UNC5CO95185 931 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 PGLSO95336 258 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 LY6G6DO95868 133 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 PF4P02776 101 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 MYBL2P10244 700 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 UNGP13051 313 aaPredicted RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 BRAFP15056 766 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 CASP1P29466 404 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 RFC1P35251 1148 aaPredicted RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 SOX5P35711 763 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 ETV3P41162 512 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 FOLR3P41439 243 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 MAPK9P45984 424 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 ZNF135P52742 658 aaPredicted RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 DCDC1P59894 354 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 FKBP3Q00688 224 aaKnown RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 LRRC63Q05C16 580 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 IL10RBQ08334 325 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 CETN1Q12798 172 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 ABRQ12979 859 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 PAK1Q13153 545 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 DAZAP2Q15038 168 aaPredicted RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 SLC5A12Q1EHB4 618 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms