RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 HIF1AQ16665 826 aa22.48■■□□□ 1.19
CBX3-204ENST00000456948 ARHGAP40Q5TG30 622 aa22.48■■□□□ 1.19
CBX3-204ENST00000456948 CENPUQ71F23 418 aa22.48■■□□□ 1.19
CBX3-204ENST00000456948 ESX1Q8N693 406 aa22.48■■□□□ 1.19
CBX3-204ENST00000456948 SPATA4Q8NEY3 305 aa22.48■■□□□ 1.19
CBX3-204ENST00000456948 OR8K5Q8NH50 307 aa22.48■■□□□ 1.19
CBX3-204ENST00000456948 NKD1Q969G9 470 aa22.48■■□□□ 1.19
CBX3-204ENST00000456948 BIRC8Q96P09 236 aa22.48■■□□□ 1.19
CBX3-204ENST00000456948 RAB11FIP5Q9BXF6 653 aa22.48■■□□□ 1.19
CBX3-204ENST00000456948 ULBP3Q9BZM4 244 aa22.48■■□□□ 1.19
CBX3-204ENST00000456948 CPNE5Q9HCH3 593 aa22.48■■□□□ 1.19
CBX3-204ENST00000456948 PILRAQ9UKJ1 303 aa22.48■■□□□ 1.19
CBX3-204ENST00000456948 SLC39A10Q9ULF5 831 aa22.48■■□□□ 1.19
CBX3-204ENST00000456948 FAM187AA6NFU0 413 aa22.47■■□□□ 1.19
CBX3-204ENST00000456948 K7ENP7 123 aa22.47■■□□□ 1.19
CBX3-204ENST00000456948 BTN3A3O00478 584 aa22.47■■□□□ 1.19
CBX3-204ENST00000456948 BTN3A1O00481 513 aa22.47■■□□□ 1.19
CBX3-204ENST00000456948 S1PR4O95977 384 aa22.47■■□□□ 1.19
CBX3-204ENST00000456948 CCNYL3P0C7X3 344 aa22.47■■□□□ 1.19
CBX3-204ENST00000456948 KPNA2P52292 529 aaKnown RBP22.47■■□□□ 1.19
CBX3-204ENST00000456948 CALCOCO2Q13137 446 aa22.47■■□□□ 1.19
CBX3-204ENST00000456948 MAP7Q14244 749 aa22.47■■□□□ 1.19
CBX3-204ENST00000456948 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.47■■□□□ 1.19
CBX3-204ENST00000456948 HSP90AA5PQ58FG0 334 aa22.47■■□□□ 1.19
CBX3-204ENST00000456948 INO80CQ6PI98 192 aaPredicted RBP22.47■■□□□ 1.19
CBX3-204ENST00000456948 UNC5AQ6ZN44 842 aa22.47■■□□□ 1.19
CBX3-204ENST00000456948 KCNMB4Q86W47 210 aa22.47■■□□□ 1.19
CBX3-204ENST00000456948 D2HGDHQ8N465 521 aa22.47■■□□□ 1.19
CBX3-204ENST00000456948 LKAAEAR1Q8TD35 194 aa22.47■■□□□ 1.19
CBX3-204ENST00000456948 PMEPA1Q969W9 287 aa22.47■■□□□ 1.19
CBX3-204ENST00000456948 RAD51AP1Q96B01 352 aa22.47■■□□□ 1.19
CBX3-204ENST00000456948 SLC22A18Q96BI1 424 aa22.47■■□□□ 1.19
CBX3-204ENST00000456948 TRIM31Q9BZY9 425 aa22.47■■□□□ 1.19
CBX3-204ENST00000456948 XKR8Q9H6D3 395 aa22.47■■□□□ 1.19
CBX3-204ENST00000456948 APMAPQ9HDC9 416 aa22.47■■□□□ 1.19
CBX3-204ENST00000456948 ACTR10Q9NZ32 417 aa22.47■■□□□ 1.19
CBX3-204ENST00000456948 CDYLQ9Y232 598 aa22.47■■□□□ 1.19
CBX3-204ENST00000456948 TMEM184BQ9Y519 407 aaPredicted RBP22.47■■□□□ 1.19
CBX3-204ENST00000456948 SEC31AO94979 1220 aaKnown RBP22.46■■□□□ 1.19
CBX3-204ENST00000456948 ATP5DP30049 168 aa22.46■■□□□ 1.19
CBX3-204ENST00000456948 RAB28P51157 221 aa22.46■■□□□ 1.19
CBX3-204ENST00000456948 ITGA8P53708 1063 aa22.46■■□□□ 1.19
CBX3-204ENST00000456948 TUBB4BP68371 445 aa22.46■■□□□ 1.19
CBX3-204ENST00000456948 RHDQ02161 417 aa22.46■■□□□ 1.19
CBX3-204ENST00000456948 CTBP1Q13363 440 aa22.46■■□□□ 1.19
CBX3-204ENST00000456948 TUBB2AQ13885 445 aa22.46■■□□□ 1.19
CBX3-204ENST00000456948 CRYMQ14894 314 aa22.46■■□□□ 1.19
CBX3-204ENST00000456948 CTSL3PQ5NE16 218 aa22.46■■□□□ 1.19
CBX3-204ENST00000456948 HIBCHQ6NVY1 386 aaPredicted RBP22.46■■□□□ 1.19
CBX3-204ENST00000456948 ADGRF3Q8IZF5 1079 aa22.46■■□□□ 1.19
CBX3-204ENST00000456948 C17orf53Q8N3J3 647 aaPredicted RBP22.46■■□□□ 1.19
CBX3-204ENST00000456948 ZBTB2Q8N680 514 aa22.46■■□□□ 1.19
CBX3-204ENST00000456948 TRIM56Q9BRZ2 755 aaKnown RBP22.46■■□□□ 1.19
CBX3-204ENST00000456948 TRIM51Q9BSJ1 452 aa22.46■■□□□ 1.19
CBX3-204ENST00000456948 TUBB2BQ9BVA1 445 aa22.46■■□□□ 1.19
CBX3-204ENST00000456948 PPANQ9NQ55 473 aaKnown RBP22.46■■□□□ 1.19
CBX3-204ENST00000456948 LATS2Q9NRM7 1088 aa22.46■■□□□ 1.19
CBX3-204ENST00000456948 FGF21Q9NSA1 209 aa22.46■■□□□ 1.19
CBX3-204ENST00000456948 IL1RAPL1Q9NZN1 696 aa22.46■■□□□ 1.19
CBX3-204ENST00000456948 KLHL42Q9P2K6 505 aa22.46■■□□□ 1.19
CBX3-204ENST00000456948 ZC3H7BQ9UGR2 993 aaKnown RBP22.46■■□□□ 1.19
CBX3-204ENST00000456948 FBXO5Q9UKT4 447 aa22.46■■□□□ 1.19
CBX3-204ENST00000456948 ICKQ9UPZ9 632 aa22.46■■□□□ 1.19
CBX3-204ENST00000456948 BTRCQ9Y297 605 aa22.46■■□□□ 1.19
CBX3-204ENST00000456948 SDK2Q58EX2 2172 aa22.45■■□□□ 1.18
CBX3-204ENST00000456948 SLC9B1P1A6NJY1 282 aa22.45■■□□□ 1.18
CBX3-204ENST00000456948 CKAP4Q07065 602 aaKnown RBP22.45■■□□□ 1.18
CBX3-204ENST00000456948 ABHD18Q0P651 414 aa22.45■■□□□ 1.18
CBX3-204ENST00000456948 KIR2DS3Q14952 304 aa22.45■■□□□ 1.18
CBX3-204ENST00000456948 KYNUQ16719 465 aa22.45■■□□□ 1.18
CBX3-204ENST00000456948 SOWAHCQ53LP3 525 aaPredicted RBP22.45■■□□□ 1.18
CBX3-204ENST00000456948 UGT3A1Q6NUS8 523 aa22.45■■□□□ 1.18
CBX3-204ENST00000456948 C6orf15Q6UXA7 325 aaPredicted RBP22.45■■□□□ 1.18
CBX3-204ENST00000456948 VRK3Q8IV63 474 aa22.45■■□□□ 1.18
CBX3-204ENST00000456948 SNRNP27Q8WVK2 155 aaKnown RBP22.45■■□□□ 1.18
CBX3-204ENST00000456948 N4BP2L2Q92802 583 aaPredicted RBP22.45■■□□□ 1.18
CBX3-204ENST00000456948 ELMO2Q96JJ3 720 aa22.45■■□□□ 1.18
CBX3-204ENST00000456948 UBL7Q96S82 380 aaPredicted RBP22.45■■□□□ 1.18
CBX3-204ENST00000456948 FBXO6Q9NRD1 293 aaPredicted RBP22.45■■□□□ 1.18
CBX3-204ENST00000456948 IARS2Q9NSE4 1012 aaKnown RBP22.45■■□□□ 1.18
CBX3-204ENST00000456948 LNPEPQ9UIQ6 1025 aa22.45■■□□□ 1.18
CBX3-204ENST00000456948 EIF4E1BA6NMX2 242 aaKnown RBP22.44■■□□□ 1.18
CBX3-204ENST00000456948 ISM1B1AKI9 464 aa22.44■■□□□ 1.18
CBX3-204ENST00000456948 NIPSNAP2O75323 286 aa22.44■■□□□ 1.18
CBX3-204ENST00000456948 SPAG6O75602 509 aa22.44■■□□□ 1.18
CBX3-204ENST00000456948 TUBB4AP04350 444 aa22.44■■□□□ 1.18
CBX3-204ENST00000456948 CHRM5P08912 532 aaPredicted RBP22.44■■□□□ 1.18
CBX3-204ENST00000456948 EBLN1P0CF75 366 aa22.44■■□□□ 1.18
CBX3-204ENST00000456948 FOLR1P15328 257 aa22.44■■□□□ 1.18
CBX3-204ENST00000456948 SLC1A2P43004 574 aa22.44■■□□□ 1.18
CBX3-204ENST00000456948 SPESP1Q6UW49 350 aa22.44■■□□□ 1.18
CBX3-204ENST00000456948 DENND6AQ8IWF6 608 aa22.44■■□□□ 1.18
CBX3-204ENST00000456948 KCNJ9Q92806 393 aa22.44■■□□□ 1.18
CBX3-204ENST00000456948 ERP44Q9BS26 406 aa22.44■■□□□ 1.18
CBX3-204ENST00000456948 PITPNM3Q9BZ71 974 aa22.44■■□□□ 1.18
CBX3-204ENST00000456948 SERTAD3Q9UJW9 196 aa22.44■■□□□ 1.18
CBX3-204ENST00000456948 UTP11Q9Y3A2 253 aaKnown RBP22.44■■□□□ 1.18
CBX3-204ENST00000456948 EFSO43281 561 aa22.43■■□□□ 1.18
CBX3-204ENST00000456948 KCNAB1Q14722 419 aa22.43■■□□□ 1.18
CBX3-204ENST00000456948 KIAA0408Q6ZU52 694 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms