RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 BANF1O75531 89 aa17.53■□□□□ 0.4
PDLIM2-215ENST00000456545 S1PR4O95977 384 aa17.53■□□□□ 0.4
PDLIM2-215ENST00000456545 EBLN1P0CF75 366 aa17.53■□□□□ 0.4
PDLIM2-215ENST00000456545 FOLR1P15328 257 aa17.53■□□□□ 0.4
PDLIM2-215ENST00000456545 IVDP26440 423 aa17.53■□□□□ 0.4
PDLIM2-215ENST00000456545 MAP4P27816 1152 aaKnown RBP17.53■□□□□ 0.4
PDLIM2-215ENST00000456545 ADARP55265 1226 aaKnown RBP17.53■□□□□ 0.4
PDLIM2-215ENST00000456545 HP1BP3Q5SSJ5 553 aaPredicted RBP17.53■□□□□ 0.4
PDLIM2-215ENST00000456545 HIBCHQ6NVY1 386 aaPredicted RBP17.53■□□□□ 0.4
PDLIM2-215ENST00000456545 FBXO38Q6PIJ6 1188 aa17.53■□□□□ 0.4
PDLIM2-215ENST00000456545 UNC5DQ6UXZ4 953 aa17.53■□□□□ 0.4
PDLIM2-215ENST00000456545 BPHLQ86WA6 291 aaPredicted RBP17.53■□□□□ 0.4
PDLIM2-215ENST00000456545 DENND6AQ8IWF6 608 aa17.53■□□□□ 0.4
PDLIM2-215ENST00000456545 RAB42Q8N4Z0 105 aa17.53■□□□□ 0.4
PDLIM2-215ENST00000456545 ZBTB2Q8N680 514 aa17.53■□□□□ 0.4
PDLIM2-215ENST00000456545 SPATA4Q8NEY3 305 aa17.53■□□□□ 0.4
PDLIM2-215ENST00000456545 MAGEC3Q8TD91 643 aa17.53■□□□□ 0.4
PDLIM2-215ENST00000456545 KIAA1143Q96AT1 154 aaPredicted RBP17.53■□□□□ 0.4
PDLIM2-215ENST00000456545 CFAP36Q96G28 342 aa17.53■□□□□ 0.4
PDLIM2-215ENST00000456545 FANCEQ9HB96 536 aa17.53■□□□□ 0.4
PDLIM2-215ENST00000456545 OR6C2Q9NZP2 312 aa17.53■□□□□ 0.4
PDLIM2-215ENST00000456545 SEMA5BQ9P283 1151 aa17.53■□□□□ 0.4
PDLIM2-215ENST00000456545 FBXO5Q9UKT4 447 aa17.53■□□□□ 0.4
PDLIM2-215ENST00000456545 PLAGL1Q9UM63 463 aa17.53■□□□□ 0.4
PDLIM2-215ENST00000456545 ICKQ9UPZ9 632 aa17.53■□□□□ 0.4
PDLIM2-215ENST00000456545 CDYLQ9Y232 598 aa17.53■□□□□ 0.4
PDLIM2-215ENST00000456545 SNX24Q9Y343 169 aa17.53■□□□□ 0.4
PDLIM2-215ENST00000456545 TEX51A0A1B0GUA7 166 aa17.52■□□□□ 0.4
PDLIM2-215ENST00000456545 FAM187AA6NFU0 413 aa17.52■□□□□ 0.4
PDLIM2-215ENST00000456545 FANCGO15287 622 aa17.52■□□□□ 0.4
PDLIM2-215ENST00000456545 FGF5P12034 268 aa17.52■□□□□ 0.4
PDLIM2-215ENST00000456545 SLC1A2P43004 574 aa17.52■□□□□ 0.4
PDLIM2-215ENST00000456545 CALCOCO2Q13137 446 aa17.52■□□□□ 0.4
PDLIM2-215ENST00000456545 CRYMQ14894 314 aa17.52■□□□□ 0.4
PDLIM2-215ENST00000456545 HIF1AQ16665 826 aa17.52■□□□□ 0.4
PDLIM2-215ENST00000456545 TTLL9Q3SXZ7 439 aa17.52■□□□□ 0.4
PDLIM2-215ENST00000456545 DCUN1D3Q8IWE4 304 aa17.52■□□□□ 0.4
PDLIM2-215ENST00000456545 ADGRF3Q8IZF5 1079 aa17.52■□□□□ 0.4
PDLIM2-215ENST00000456545 AGGF1Q8N302 714 aaeCLIP17.52■□□□□ 0.4
PDLIM2-215ENST00000456545 N4BP2L2Q92802 583 aaPredicted RBP17.52■□□□□ 0.4
PDLIM2-215ENST00000456545 RNF31Q96EP0 1072 aa17.52■□□□□ 0.4
PDLIM2-215ENST00000456545 PPM1MQ96MI6 270 aa17.52■□□□□ 0.4
PDLIM2-215ENST00000456545 NRTNQ99748 197 aa17.52■□□□□ 0.4
PDLIM2-215ENST00000456545 FGF21Q9NSA1 209 aa17.52■□□□□ 0.4
PDLIM2-215ENST00000456545 ZC3H7BQ9UGR2 993 aaKnown RBP17.52■□□□□ 0.4
PDLIM2-215ENST00000456545 LNPEPQ9UIQ6 1025 aa17.52■□□□□ 0.4
PDLIM2-215ENST00000456545 PILRAQ9UKJ1 303 aa17.52■□□□□ 0.4
PDLIM2-215ENST00000456545 K7ENP7 123 aa17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 SPAG6O75602 509 aa17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 KIAA0754O94854 1291 aa17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 SEC31AO94979 1220 aaKnown RBP17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 CHRM5P08912 532 aaPredicted RBP17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 CCNYL3P0C7X3 344 aa17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 ERVK-10P10266 1014 aa17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 ELK3P41970 407 aa17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 MRPS25P82663 173 aaKnown RBP17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 C2orf54Q08AI8 447 aa17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 MSS51Q4VC12 460 aa17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 ZNF789Q5FWF6 425 aa17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 INO80CQ6PI98 192 aaPredicted RBP17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 CNSTQ6PJW8 725 aa17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 C6orf15Q6UXA7 325 aaPredicted RBP17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 D2HGDHQ8N465 521 aa17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 ESX1Q8N693 406 aa17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 RAD51AP1Q96B01 352 aa17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 LRRC39Q96DD0 335 aa17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 C16orf45Q96MC5 204 aaPredicted RBP17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 PWWP2AQ96N64 755 aa17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 EFHD1Q9BUP0 239 aa17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 KLHL25Q9H0H3 589 aa17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 CIDEBQ9UHD4 219 aa17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 CHMP2BQ9UQN3 213 aa17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 SSUH2Q9Y2M2 353 aa17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 TMEM184BQ9Y519 407 aaPredicted RBP17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 COMMD10Q9Y6G5 202 aa17.51■□□□□ 0.39
PDLIM2-215ENST00000456545 SDK2Q58EX2 2172 aa17.5■□□□□ 0.39
PDLIM2-215ENST00000456545 EIF4E1BA6NMX2 242 aaKnown RBP17.5■□□□□ 0.39
PDLIM2-215ENST00000456545 EFSO43281 561 aa17.5■□□□□ 0.39
PDLIM2-215ENST00000456545 HAUS5O94927 633 aa17.5■□□□□ 0.39
PDLIM2-215ENST00000456545 MT-ND3P03897 115 aa17.5■□□□□ 0.39
PDLIM2-215ENST00000456545 CCNFP41002 786 aa17.5■□□□□ 0.39
PDLIM2-215ENST00000456545 CARSP49589 748 aaKnown RBP17.5■□□□□ 0.39
PDLIM2-215ENST00000456545 RAB28P51157 221 aa17.5■□□□□ 0.39
PDLIM2-215ENST00000456545 TUBB4BP68371 445 aa17.5■□□□□ 0.39
PDLIM2-215ENST00000456545 MPP1Q00013 466 aa17.5■□□□□ 0.39
PDLIM2-215ENST00000456545 SRSF6Q13247 344 aaKnown RBP17.5■□□□□ 0.39
PDLIM2-215ENST00000456545 TUBB2AQ13885 445 aa17.5■□□□□ 0.39
PDLIM2-215ENST00000456545 GPR19Q15760 415 aa17.5■□□□□ 0.39
PDLIM2-215ENST00000456545 KYNUQ16719 465 aa17.5■□□□□ 0.39
PDLIM2-215ENST00000456545 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.5■□□□□ 0.39
PDLIM2-215ENST00000456545 SPESP1Q6UW49 350 aa17.5■□□□□ 0.39
PDLIM2-215ENST00000456545 UNC5BQ8IZJ1 945 aa17.5■□□□□ 0.39
PDLIM2-215ENST00000456545 C2orf73Q8N5S3 287 aaPredicted RBP17.5■□□□□ 0.39
PDLIM2-215ENST00000456545 ZNF592Q92610 1267 aa17.5■□□□□ 0.39
PDLIM2-215ENST00000456545 SLC22A18Q96BI1 424 aa17.5■□□□□ 0.39
PDLIM2-215ENST00000456545 ERP44Q9BS26 406 aa17.5■□□□□ 0.39
PDLIM2-215ENST00000456545 TUBB2BQ9BVA1 445 aa17.5■□□□□ 0.39
PDLIM2-215ENST00000456545 RAB11FIP5Q9BXF6 653 aa17.5■□□□□ 0.39
PDLIM2-215ENST00000456545 SLC7A5P2Q9GIP4 190 aa17.5■□□□□ 0.39
PDLIM2-215ENST00000456545 DPH5Q9H2P9 285 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms