RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 C1orf105O95561 183 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 RBP1P09455 135 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 NME1P15531 152 aaKnown RBP10.7□□□□□ -0.7
SCN9A-205ENST00000454569 CNR2P34972 360 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 CTSKP43235 329 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 PRKG2Q13237 762 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 PFKFB4Q16877 469 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 PRRT3Q5FWE3 981 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 PEAR1Q5VY43 1037 aaPredicted RBP10.7□□□□□ -0.7
SCN9A-205ENST00000454569 KLC3Q6P597 504 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 NEK10Q6ZWH5 1172 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 PDZD3Q86UT5 571 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 TAX1BP1Q86VP1 789 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 LCA5Q86VQ0 697 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 DCP2Q8IU60 420 aaKnown RBP10.7□□□□□ -0.7
SCN9A-205ENST00000454569 NUDCD3Q8IVD9 361 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 PRSS33Q8NF86 280 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 FAM174AQ8TBP5 190 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 CKAP2Q8WWK9 683 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 JPH3Q8WXH2 748 aaPredicted RBP10.7□□□□□ -0.7
SCN9A-205ENST00000454569 TSNARE1Q96NA8 513 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 PKP4Q99569 1192 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 GATA5Q9BWX5 397 aaPredicted RBP10.7□□□□□ -0.7
SCN9A-205ENST00000454569 DPEP2Q9H4A9 486 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 IL21RQ9HBE5 538 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 OXSMQ9NWU1 459 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 NCKIPSDQ9NZQ3 722 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 SIRPGQ9P1W8 387 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 ZNF624Q9P2J8 865 aaPredicted RBP10.7□□□□□ -0.7
SCN9A-205ENST00000454569 APOBEC3BQ9UH17 382 aaKnown RBP10.7□□□□□ -0.7
SCN9A-205ENST00000454569 OARD1Q9Y530 152 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 PCDHGA2Q9Y5H1 932 aa10.7□□□□□ -0.7
SCN9A-205ENST00000454569 A0A1B0GTL3 188 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 F8W8V4 182 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 FFAR2O15552 330 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 KLK8O60259 260 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 LYPLA1O75608 230 aaPredicted RBP10.69□□□□□ -0.7
SCN9A-205ENST00000454569 GSTM1P09488 218 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 MYL2P10916 166 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 TSPAN8P19075 237 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 TAC1P20366 129 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 IDSP22304 550 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 GDF5P43026 501 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 RPIAP49247 311 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 IL9RQ01113 521 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 GSTM4Q03013 218 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 TCF15Q12870 199 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 OVGP1Q12889 678 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 RPA4Q13156 261 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 CHI3L2Q15782 390 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 RPE65Q16518 533 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 UAP1L1Q3KQV9 507 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 UNC50Q53HI1 259 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 SYT12Q8IV01 421 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 PTGR2Q8N8N7 351 aaPredicted RBP10.69□□□□□ -0.7
SCN9A-205ENST00000454569 PPFIBP2Q8ND30 876 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 ZNF75CPQ92670 426 aaPredicted RBP10.69□□□□□ -0.7
SCN9A-205ENST00000454569 TFGQ92734 400 aaPredicted RBP10.69□□□□□ -0.7
SCN9A-205ENST00000454569 C12orf66Q96MD2 445 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 NSUN5Q96P11 429 aaKnown RBP10.69□□□□□ -0.7
SCN9A-205ENST00000454569 IL17FQ96PD4 163 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 TMEM237Q96Q45 408 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 TMEM79Q9BSE2 394 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 PARVBQ9HBI1 364 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 SLCO1B3Q9NPD5 702 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 CD274Q9NZQ7 290 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 TAAR2Q9P1P5 351 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 MAP10Q9P2G4 905 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 MDC1Q14676 2089 aaKnown RBP10.69□□□□□ -0.7
SCN9A-205ENST00000454569 ASCC3Q8N3C0 2202 aaKnown RBP10.69□□□□□ -0.7
SCN9A-205ENST00000454569 UNC13CQ8NB66 2214 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 PDZK1P1A8MUH7 402 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 YY2O15391 372 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 C8GP07360 202 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 GIMD1P0DJR0 217 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 CTSEP14091 401 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 ATP5F1P24539 256 aaPredicted RBP10.69□□□□□ -0.7
SCN9A-205ENST00000454569 SLC19A1P41440 591 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 SEC24CP53992 1094 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 PRKAA2P54646 552 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 NAGLUP54802 743 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 C21orf59P57076 290 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 FASTKQ14296 549 aaKnown RBP10.69□□□□□ -0.7
SCN9A-205ENST00000454569 PDK4Q16654 411 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 TCEAL6Q6IPX3 200 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 ABRAXAS1Q6UWZ7 409 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 TAF8Q7Z7C8 310 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 ADAMTSL2Q86TH1 951 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 C11orf74Q86VG3 221 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 LSMEM2Q8N112 164 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 NAGSQ8N159 534 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 SLC25A45Q8N413 288 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 C2orf73Q8N5S3 287 aaPredicted RBP10.69□□□□□ -0.7
SCN9A-205ENST00000454569 LMX1AQ8TE12 382 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 DYDC1Q8WWB3 177 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 TCEAL3Q969E4 200 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 RHBDF1Q96CC6 855 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 MENTQ9BUN1 341 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 ATG10Q9H0Y0 220 aa10.69□□□□□ -0.7
SCN9A-205ENST00000454569 ARRDC1-AS1Q9H2J1 176 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms