RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 SYTL2Q9HCH5 934 aa15.54■□□□□ 0.08
SNX17-204ENST00000453453 PTBP2Q9UKA9 531 aaKnown RBP15.54■□□□□ 0.08
SNX17-204ENST00000453453 CYP8B1Q9UNU6 501 aa15.54■□□□□ 0.08
SNX17-204ENST00000453453 ACOT8O14734 319 aa15.53■□□□□ 0.08
SNX17-204ENST00000453453 INPP4BO15327 924 aa15.53■□□□□ 0.08
SNX17-204ENST00000453453 KLHL41O60662 606 aa15.53■□□□□ 0.08
SNX17-204ENST00000453453 AP2A2O94973 939 aa15.53■□□□□ 0.08
SNX17-204ENST00000453453 SLC35E2BP0CK96 405 aa15.53■□□□□ 0.08
SNX17-204ENST00000453453 ATP1B2P14415 290 aaPredicted RBP15.53■□□□□ 0.08
SNX17-204ENST00000453453 XRCC1P18887 633 aaPredicted RBP15.53■□□□□ 0.08
SNX17-204ENST00000453453 TEAD1P28347 426 aa15.53■□□□□ 0.08
SNX17-204ENST00000453453 CA5AP35218 305 aa15.53■□□□□ 0.08
SNX17-204ENST00000453453 SLC26A3P40879 764 aa15.53■□□□□ 0.08
SNX17-204ENST00000453453 GTF2H3Q13889 308 aa15.53■□□□□ 0.08
SNX17-204ENST00000453453 MAPRE2Q15555 327 aa15.53■□□□□ 0.08
SNX17-204ENST00000453453 KCTD21Q4G0X4 260 aa15.53■□□□□ 0.08
SNX17-204ENST00000453453 PPM1JQ5JR12 505 aa15.53■□□□□ 0.08
SNX17-204ENST00000453453 PNCKQ6P2M8 343 aa15.53■□□□□ 0.08
SNX17-204ENST00000453453 ZYG11AQ6WRX3 759 aa15.53■□□□□ 0.08
SNX17-204ENST00000453453 MACC1Q6ZN28 852 aa15.53■□□□□ 0.08
SNX17-204ENST00000453453 ATG14Q6ZNE5 492 aa15.53■□□□□ 0.08
SNX17-204ENST00000453453 CARM1Q86X55 608 aa15.53■□□□□ 0.08
SNX17-204ENST00000453453 EDAQ92838 391 aa15.53■□□□□ 0.08
SNX17-204ENST00000453453 NECAB3Q96P71 396 aaPredicted RBP15.53■□□□□ 0.08
SNX17-204ENST00000453453 CDRT15Q96T59 188 aa15.53■□□□□ 0.08
SNX17-204ENST00000453453 WDR41Q9HAD4 459 aa15.53■□□□□ 0.08
SNX17-204ENST00000453453 FAIMQ9NVQ4 179 aa15.53■□□□□ 0.08
SNX17-204ENST00000453453 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.53■□□□□ 0.08
SNX17-204ENST00000453453 EBF1Q9UH73 591 aa15.53■□□□□ 0.08
SNX17-204ENST00000453453 TMPRSS11EQ9UL52 423 aa15.53■□□□□ 0.08
SNX17-204ENST00000453453 PIKFYVEQ9Y2I7 2098 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 TTC36A6NLP5 189 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 AIM2O14862 343 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 NIPSNAP2O75323 286 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 H6PDO95479 791 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 PAK4O96013 591 aaPredicted RBP15.52■□□□□ 0.08
SNX17-204ENST00000453453 DCNP07585 359 aaKnown RBP15.52■□□□□ 0.08
SNX17-204ENST00000453453 ZNF26P17031 533 aaPredicted RBP15.52■□□□□ 0.08
SNX17-204ENST00000453453 MAT2AP31153 395 aaKnown RBP15.52■□□□□ 0.08
SNX17-204ENST00000453453 ACSL1P33121 698 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 SERPINB5P36952 375 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 CXCL12P48061 93 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 CSRP3P50461 194 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 RPL14P50914 215 aaKnown RBP15.52■□□□□ 0.08
SNX17-204ENST00000453453 CCR3P51677 355 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 MTAPQ13126 283 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 IRF4Q15306 451 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 FAM83EQ2M2I3 478 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 WSCD2Q2TBF2 565 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 VWA5B1Q5TIE3 1220 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 LILRA2Q8N149 483 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 PACRGLQ8N7B6 248 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 BHLHE22Q8NFJ8 381 aaPredicted RBP15.52■□□□□ 0.08
SNX17-204ENST00000453453 KLK6Q92876 244 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 ASB9Q96DX5 294 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 GPR21Q99679 349 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 CCT7Q99832 543 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 PKP2Q99959 881 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 COPS7BQ9H9Q2 264 aaPredicted RBP15.52■□□□□ 0.08
SNX17-204ENST00000453453 ZBTB26Q9HCK0 441 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 SARS2Q9NP81 518 aaKnown RBP15.52■□□□□ 0.08
SNX17-204ENST00000453453 C8orf4Q9NR00 106 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 OXSMQ9NWU1 459 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 C2orf42Q9NWW7 574 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 CDYLQ9Y232 598 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 MYRFQ9Y2G1 1151 aa15.52■□□□□ 0.08
SNX17-204ENST00000453453 NUMA1Q14980 2115 aa15.52■□□□□ 0.07
SNX17-204ENST00000453453 SH3PXD2BA1X283 911 aa15.51■□□□□ 0.07
SNX17-204ENST00000453453 H3BNH8 94 aa15.51■□□□□ 0.07
SNX17-204ENST00000453453 K7ESM1 405 aa15.51■□□□□ 0.07
SNX17-204ENST00000453453 CBFA2T3O75081 653 aa15.51■□□□□ 0.07
SNX17-204ENST00000453453 SOD1P00441 154 aa15.51■□□□□ 0.07
SNX17-204ENST00000453453 IDO1P14902 403 aa15.51■□□□□ 0.07
SNX17-204ENST00000453453 CD6P30203 668 aa15.51■□□□□ 0.07
SNX17-204ENST00000453453 TTKP33981 857 aa15.51■□□□□ 0.07
SNX17-204ENST00000453453 PPP2CBP62714 309 aa15.51■□□□□ 0.07
SNX17-204ENST00000453453 PPP2CAP67775 309 aa15.51■□□□□ 0.07
SNX17-204ENST00000453453 ART3Q13508 389 aa15.51■□□□□ 0.07
SNX17-204ENST00000453453 CEACAM7Q14002 265 aa15.51■□□□□ 0.07
SNX17-204ENST00000453453 ZNF460Q14592 562 aa15.51■□□□□ 0.07
SNX17-204ENST00000453453 AGAP9Q5VTM2 703 aa15.51■□□□□ 0.07
SNX17-204ENST00000453453 LIPMQ5VYY2 423 aa15.51■□□□□ 0.07
SNX17-204ENST00000453453 Q6ZNX1 250 aa15.51■□□□□ 0.07
SNX17-204ENST00000453453 CLDN19Q8N6F1 224 aa15.51■□□□□ 0.07
SNX17-204ENST00000453453 TP53I13Q8NBR0 393 aaPredicted RBP15.51■□□□□ 0.07
SNX17-204ENST00000453453 DENND6BQ8NEG7 585 aa15.51■□□□□ 0.07
SNX17-204ENST00000453453 OR52B2Q96RD2 323 aa15.51■□□□□ 0.07
SNX17-204ENST00000453453 SHCBP1LQ9BZQ2 653 aa15.51■□□□□ 0.07
SNX17-204ENST00000453453 WDR26Q9H7D7 661 aa15.51■□□□□ 0.07
SNX17-204ENST00000453453 CD93Q9NPY3 652 aa15.51■□□□□ 0.07
SNX17-204ENST00000453453 PHPT1Q9NRX4 125 aaPredicted RBP15.51■□□□□ 0.07
SNX17-204ENST00000453453 OAS3Q9Y6K5 1087 aaKnown RBP15.51■□□□□ 0.07
SNX17-204ENST00000453453 PRSS21Q9Y6M0 314 aa15.51■□□□□ 0.07
SNX17-204ENST00000453453 VEGFDO43915 354 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 TRIM16O95361 564 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 FTH1P02794 183 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 LTA4HP09960 611 aaKnown RBP15.5■□□□□ 0.07
SNX17-204ENST00000453453 ATP6V1B1P15313 513 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 CCR5P51681 352 aa15.5■□□□□ 0.07
SNX17-204ENST00000453453 CDKL1Q00532 357 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms