RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 CHRAC1Q9NRG0 131 aa12.48□□□□□ -0.41
CHD3-206ENST00000452447 CATSPERZQ9NTU4 200 aa12.48□□□□□ -0.41
CHD3-206ENST00000452447 OR6C2Q9NZP2 312 aa12.48□□□□□ -0.41
CHD3-206ENST00000452447 ANAPC2Q9UJX6 822 aa12.48□□□□□ -0.41
CHD3-206ENST00000452447 ICKQ9UPZ9 632 aa12.48□□□□□ -0.41
CHD3-206ENST00000452447 CCDC88CQ9P219 2028 aa12.48□□□□□ -0.41
CHD3-206ENST00000452447 ANKRD12Q6UB98 2062 aa12.48□□□□□ -0.41
CHD3-206ENST00000452447 BHMG1C9JSJ3 638 aaPredicted RBP12.47□□□□□ -0.41
CHD3-206ENST00000452447 RFPL1O75677 317 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 PVRP15151 417 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 TTPAP49638 278 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 ITGA1P56199 1179 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 RPS18P62269 152 aaKnown RBP12.47□□□□□ -0.41
CHD3-206ENST00000452447 TLE1Q04724 770 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 HSPA14Q0VDF9 509 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 ABRQ12979 859 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 SIX1Q15475 284 aaPredicted RBP12.47□□□□□ -0.41
CHD3-206ENST00000452447 PRAMEF17Q5VTA0 474 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 IZUMO3Q5VZ72 239 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 ZNF517Q6ZMY9 492 aaPredicted RBP12.47□□□□□ -0.41
CHD3-206ENST00000452447 OR1L3Q8NH93 324 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 ASZ1Q8WWH4 475 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 THAP4Q8WY91 577 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 RUFY1Q96T51 708 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 IL22Q9GZX6 179 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 CHST8Q9H2A9 424 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 HOMER3Q9NSC5 361 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 BFARQ9NZS9 450 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 COL12A1Q99715 3063 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 E7EQ34 232 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 CD3EAPO15446 510 aaKnown RBP12.47□□□□□ -0.41
CHD3-206ENST00000452447 CEP104O60308 925 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 RPN2P04844 631 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 APOA4P06727 396 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 CHRM5P08912 532 aaPredicted RBP12.47□□□□□ -0.41
CHD3-206ENST00000452447 UGT2B7P16662 529 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 CCR7P32248 378 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 PMS2P54278 862 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 UGT8Q16880 541 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 DNAJC21Q5F1R6 531 aaKnown RBP12.47□□□□□ -0.41
CHD3-206ENST00000452447 PLEKHS1Q5SXH7 462 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 CDHR3Q6ZTQ4 885 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 LDB1Q86U70 411 aaPredicted RBP12.47□□□□□ -0.41
CHD3-206ENST00000452447 GPR135Q8IZ08 494 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 DSELQ8IZU8 1212 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 C19orf47Q8N9M1 422 aaKnown RBP12.47□□□□□ -0.41
CHD3-206ENST00000452447 GSDMBQ8TAX9 411 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 TCTN2Q96GX1 697 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 CARD6Q9BX69 1037 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 GRPEL1Q9HAV7 217 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 SNX7Q9UNH6 387 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 TP53TG5Q9Y2B4 290 aa12.47□□□□□ -0.41
CHD3-206ENST00000452447 PRRC2CQ9Y520 2896 aaKnown RBP12.46□□□□□ -0.41
CHD3-206ENST00000452447 PCM1Q15154 2024 aa12.46□□□□□ -0.41
CHD3-206ENST00000452447 FER1L5A0AVI2 2057 aa12.46□□□□□ -0.41
CHD3-206ENST00000452447 PRMT5O14744 637 aaPredicted RBP12.46□□□□□ -0.42
CHD3-206ENST00000452447 HBQ1P09105 142 aa12.46□□□□□ -0.42
CHD3-206ENST00000452447 CXCR5P32302 372 aa12.46□□□□□ -0.42
CHD3-206ENST00000452447 CASRP41180 1078 aa12.46□□□□□ -0.42
CHD3-206ENST00000452447 KCNJ1P48048 391 aa12.46□□□□□ -0.42
CHD3-206ENST00000452447 NPY2RP49146 381 aa12.46□□□□□ -0.42
CHD3-206ENST00000452447 CRADDP78560 199 aa12.46□□□□□ -0.42
CHD3-206ENST00000452447 SEMA3AQ14563 771 aa12.46□□□□□ -0.42
CHD3-206ENST00000452447 PTRHD1Q6GMV3 140 aaKnown RBP12.46□□□□□ -0.42
CHD3-206ENST00000452447 TCTN3Q6NUS6 607 aa12.46□□□□□ -0.42
CHD3-206ENST00000452447 TRIM73Q86UV7 250 aa12.46□□□□□ -0.42
CHD3-206ENST00000452447 APLFQ8IW19 511 aaPredicted RBP12.46□□□□□ -0.42
CHD3-206ENST00000452447 SLC22A15Q8IZD6 547 aa12.46□□□□□ -0.42
CHD3-206ENST00000452447 OTUD6BQ8N6M0 293 aa12.46□□□□□ -0.42
CHD3-206ENST00000452447 CFAP61Q8NHU2 1237 aa12.46□□□□□ -0.42
CHD3-206ENST00000452447 PANX3Q96QZ0 392 aa12.46□□□□□ -0.42
CHD3-206ENST00000452447 OR2A14Q96R47 310 aa12.46□□□□□ -0.42
CHD3-206ENST00000452447 AP1M1Q9BXS5 423 aa12.46□□□□□ -0.42
CHD3-206ENST00000452447 NLNQ9BYT8 704 aa12.46□□□□□ -0.42
CHD3-206ENST00000452447 PCMTD2Q9NV79 361 aa12.46□□□□□ -0.42
CHD3-206ENST00000452447 TLK1Q9UKI8 766 aa12.46□□□□□ -0.42
CHD3-206ENST00000452447 PLAGL1Q9UM63 463 aa12.46□□□□□ -0.42
CHD3-206ENST00000452447 SPENQ96T58 3664 aaKnown RBP12.46□□□□□ -0.42
CHD3-206ENST00000452447 FLNCQ14315 2725 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 DOPEY2Q9Y3R5 2298 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 UBR5O95071 2799 aaPredicted RBP12.45□□□□□ -0.42
CHD3-206ENST00000452447 RELNP78509 3460 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 A0A0J9YY10 115 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 IQCF5A8MTL0 148 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 ISM1B1AKI9 464 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 ZNF749O43361 778 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 NDUFS3O75489 264 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 RAB40ALP0C0E4 278 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 AGXTP21549 392 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 RORAP35398 523 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 RAB28P51157 221 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 CDK16Q00536 496 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 KLRB1Q12918 225 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 KIR2DS3Q14952 304 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 TMED2Q15363 201 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 ZNF789Q5FWF6 425 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 SYTL1Q8IYJ3 562 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 KRT222Q8N1A0 295 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 MPP5Q8N3R9 675 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 ENDOVQ8N8Q3 282 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms