RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 PCYOX1LQ8NBM8 494 aa10.49□□□□□ -0.73
PKP4-206ENST00000452162 OR2A12Q8NGT7 310 aa10.49□□□□□ -0.73
PKP4-206ENST00000452162 KLHL32Q96NJ5 620 aa10.49□□□□□ -0.73
PKP4-206ENST00000452162 CDK15Q96Q40 435 aa10.49□□□□□ -0.73
PKP4-206ENST00000452162 CCT7Q99832 543 aa10.49□□□□□ -0.73
PKP4-206ENST00000452162 BRINP2Q9C0B6 783 aa10.49□□□□□ -0.73
PKP4-206ENST00000452162 KLHL4Q9C0H6 718 aa10.49□□□□□ -0.73
PKP4-206ENST00000452162 SLC6A17Q9H1V8 727 aa10.49□□□□□ -0.73
PKP4-206ENST00000452162 VCX3BQ9H321 246 aa10.49□□□□□ -0.73
PKP4-206ENST00000452162 SPATS2LQ9NUQ6 558 aaKnown RBP10.49□□□□□ -0.73
PKP4-206ENST00000452162 FAM86C1Q9NVL1 165 aa10.49□□□□□ -0.73
PKP4-206ENST00000452162 KLHL42Q9P2K6 505 aa10.49□□□□□ -0.73
PKP4-206ENST00000452162 B4GALT6Q9UBX8 382 aa10.49□□□□□ -0.73
PKP4-206ENST00000452162 PRSS51A0A1B0GVH4 220 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 A0A1W2PQ67 120 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 FXYD1O00168 92 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 APBB3O95704 486 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 C8BP07358 591 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 SRPRAP08240 638 aaKnown RBP10.48□□□□□ -0.73
PKP4-206ENST00000452162 TCN1P20061 433 aaPredicted RBP10.48□□□□□ -0.73
PKP4-206ENST00000452162 ZFP36L2P47974 494 aaKnown RBP10.48□□□□□ -0.73
PKP4-206ENST00000452162 ST8SIA6P61647 398 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 TRAP1Q12931 704 aaKnown RBP10.48□□□□□ -0.73
PKP4-206ENST00000452162 RALGDSQ12967 914 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 TRAF3Q13114 568 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 GTF2H2Q13888 395 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 TRIP10Q15642 601 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 PHKG1Q16816 387 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 ZNF528Q3MIS6 628 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 VPS26BQ4G0F5 336 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 ATP13A5Q4VNC0 1218 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 COQ5Q5HYK3 327 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 SAMD4BQ5PRF9 694 aaKnown RBP10.48□□□□□ -0.73
PKP4-206ENST00000452162 GTF2H2CQ6P1K8 395 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 BLOC1S3Q6QNY0 202 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 SCIMPQ6UWF3 145 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 GDPD4Q6W3E5 623 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 DCBLD1Q8N8Z6 715 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 UBTD2Q8WUN7 234 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 HMGB4Q8WW32 186 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 NELL1Q92832 810 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 TMEM79Q9BSE2 394 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 KCNH6Q9H252 994 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 POLMQ9NP87 494 aaPredicted RBP10.48□□□□□ -0.73
PKP4-206ENST00000452162 PFDN4Q9NQP4 134 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 RIMS3Q9UJD0 308 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 TMPRSS11EQ9UL52 423 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 GPR179Q6PRD1 2367 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 C9JVG2 144 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 GABRG2P18507 467 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 SPINT3P49223 89 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 SLC7A2P52569 658 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 ERVK-8P63133 956 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 STARD3Q14849 445 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 PDCD4Q53EL6 469 aaKnown RBP10.48□□□□□ -0.73
PKP4-206ENST00000452162 C6orf10Q5SRN2 563 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 ZDHHC20Q5W0Z9 365 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 Q6ZSR9 355 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 TMEM126BQ8IUX1 230 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 FRS2Q8WU20 508 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 TSPEARQ8WU66 669 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 ULK4Q96C45 1275 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 SLC45A3Q96JT2 553 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 COPS8Q99627 209 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 SLC39A3Q9BRY0 314 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 TPSD1Q9BZJ3 242 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 MKRN2Q9H000 416 aaKnown RBP10.48□□□□□ -0.73
PKP4-206ENST00000452162 PCDHAC1Q9H158 963 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 RIC8BQ9NVN3 520 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 KCTD5Q9NXV2 234 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 ABCD2Q9UBJ2 740 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 R4GN57 208 aa10.48□□□□□ -0.73
PKP4-206ENST00000452162 ANGPT2O15123 496 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 SYNCRIPO60506 623 aaKnown RBP10.47□□□□□ -0.73
PKP4-206ENST00000452162 SMNDC1O75940 238 aaKnown RBP eCLIP10.47□□□□□ -0.732e-7■■□□□ 13.3
PKP4-206ENST00000452162 OTCP00480 354 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 CAPN1P07384 714 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 CBSLP0DN79 551 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 VCLP18206 1134 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 NDUFV2P19404 249 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 HOXA6P31267 233 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 CBSP35520 551 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 HSPA7P48741 367 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 HTR6P50406 440 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 ATXN3P54252 364 aaPredicted RBP10.47□□□□□ -0.73
PKP4-206ENST00000452162 MRPS35P82673 323 aaKnown RBP10.47□□□□□ -0.73
PKP4-206ENST00000452162 SRSF5Q13243 272 aaKnown RBP10.47□□□□□ -0.73
PKP4-206ENST00000452162 RCAN2Q14206 197 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 RPS6KA2Q15349 733 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 LRRC36Q1X8D7 754 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 HNRNPA1L2Q32P51 320 aaKnown RBP10.47□□□□□ -0.73
PKP4-206ENST00000452162 TTLL9Q3SXZ7 439 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 LRRC73Q5JTD7 316 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 C6orf136Q5SQH8 315 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 SULT1C3Q6IMI6 304 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 CACUL1Q86Y37 369 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 LILRA2Q8N149 483 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 CHCHD4Q8N4Q1 142 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 MINDY1Q8N5J2 469 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 ZBTB44Q8NCP5 570 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms