RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 KEAP1Q14145 624 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 SIM2Q14190 667 aaPredicted RBP8.46□□□□□ -1.06
LSM5-208ENST00000450169 CSHL1Q14406 222 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 GBX1Q14549 363 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 BAK1Q16611 211 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 SETMARQ53H47 684 aaPredicted RBP8.46□□□□□ -1.06
LSM5-208ENST00000450169 ENPP6Q6UWR7 440 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 PID1Q7Z2X4 250 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 C16orf62Q7Z3J2 963 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 SLC46A3Q7Z3Q1 461 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 TMEM179BQ7Z7N9 219 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 PHYKPLQ8IUZ5 450 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 SLC22A9Q8IVM8 553 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 ADHFE1Q8IWW8 467 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 NETO2Q8NC67 525 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 CCNYQ8ND76 341 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 FBXO30Q8TB52 745 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 UBA3Q8TBC4 463 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 ASB15Q8WXK1 588 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 COL26A1Q96A83 441 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 TUBGCP3Q96CW5 907 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 SLC47A1Q96FL8 570 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 SIGLEC11Q96RL6 698 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.46□□□□□ -1.06
LSM5-208ENST00000450169 MAGEB5Q9BZ81 275 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 RIBC2Q9H4K1 309 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 POLMQ9NP87 494 aaPredicted RBP8.46□□□□□ -1.06
LSM5-208ENST00000450169 CASS4Q9NQ75 786 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 ASAH2Q9NR71 780 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 ING3Q9NXR8 418 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 MUTYHQ9UIF7 546 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 LEF1Q9UJU2 399 aaPredicted RBP8.46□□□□□ -1.06
LSM5-208ENST00000450169 PCDHB5Q9Y5E4 795 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 U3KQV3 271 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 NRCAMQ92823 1304 aa8.46□□□□□ -1.06
LSM5-208ENST00000450169 ERN1O75460 977 aaKnown RBP8.45□□□□□ -1.06
LSM5-208ENST00000450169 TNFRSF21O75509 655 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 DGAT1O75907 488 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 PAPSS2O95340 614 aaPredicted RBP8.45□□□□□ -1.06
LSM5-208ENST00000450169 GDF11O95390 407 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 PIGRP01833 764 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 CLEC2LP0C7M8 214 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 LBPP18428 481 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 GGT1P19440 569 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 AZGP1P25311 298 aaKnown RBP8.45□□□□□ -1.06
LSM5-208ENST00000450169 SFNP31947 248 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 TNFSF9P41273 254 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 NPY2RP49146 381 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 CDH13P55290 713 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 HUNKP57058 714 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 TAS2R39P59534 338 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 SCN1BQ07699 218 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 GRM1Q13255 1194 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 ASAH1Q13510 395 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 ZMYND11Q15326 602 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 NKG7Q16617 165 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 ZMAT1Q5H9K5 638 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 ATF7IP2Q5U623 682 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 IER5Q5VY09 327 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 TMEM81Q6P7N7 255 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 ZNF782Q6ZMW2 699 aaPredicted RBP8.45□□□□□ -1.06
LSM5-208ENST00000450169 COMMD7Q86VX2 200 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 NLRP8Q86W28 1048 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 TMC8Q8IU68 726 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 PSTKQ8IV42 348 aaKnown RBP8.45□□□□□ -1.06
LSM5-208ENST00000450169 TWIST2Q8WVJ9 160 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 AKAP1Q92667 903 aaKnown RBP eCLIP8.45□□□□□ -1.06
LSM5-208ENST00000450169 REPS1Q96D71 796 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 TRMT61AQ96FX7 289 aaKnown RBP8.45□□□□□ -1.06
LSM5-208ENST00000450169 DCLRE1CQ96SD1 692 aaKnown RBP8.45□□□□□ -1.06
LSM5-208ENST00000450169 CHCHD6Q9BRQ6 235 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 XYLT2Q9H1B5 865 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 OR51E2Q9H255 320 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 ACTR8Q9H981 624 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 FAM105AQ9NUU6 356 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 SMPD4Q9NXE4 827 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 ADGRE2Q9UHX3 823 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 TSR3Q9UJK0 312 aaKnown RBP8.45□□□□□ -1.06
LSM5-208ENST00000450169 UTS2RQ9UKP6 389 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 ELF5Q9UKW6 265 aaPredicted RBP8.45□□□□□ -1.06
LSM5-208ENST00000450169 GMPPBQ9Y5P6 360 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 SNX8Q9Y5X2 465 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 V9GYH0 126 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 LRRC37AA6NMS7 1700 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 COL11A2P13942 1736 aaPredicted RBP8.45□□□□□ -1.06
LSM5-208ENST00000450169 PPP6CO00743 305 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 GOT1P17174 413 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 EFNA1P20827 205 aaPredicted RBP8.45□□□□□ -1.06
LSM5-208ENST00000450169 KELP23276 732 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 DIO3P55073 304 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 CDH8P55286 799 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 PER3P56645 1201 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 NFIAQ12857 509 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 MXD4Q14582 209 aaPredicted RBP8.45□□□□□ -1.06
LSM5-208ENST00000450169 AANATQ16613 207 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 DUOXA2Q1HG44 320 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 TEX261Q6UWH6 196 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 NECAB2Q7Z6G3 386 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 DENND6AQ8IWF6 608 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 CYP4Z2PQ8N1L4 340 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms