RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 N4BP2L2Q92802 583 aaPredicted RBP7.57□□□□□ -1.2
LINC01961-201ENST00000449954 HDAC10Q969S8 669 aa7.57□□□□□ -1.2
LINC01961-201ENST00000449954 ZNF396Q96N95 335 aaPredicted RBP7.57□□□□□ -1.2
LINC01961-201ENST00000449954 ZNF599Q96NL3 588 aa7.57□□□□□ -1.2
LINC01961-201ENST00000449954 MENTQ9BUN1 341 aa7.57□□□□□ -1.2
LINC01961-201ENST00000449954 BDH2Q9BUT1 245 aa7.57□□□□□ -1.2
LINC01961-201ENST00000449954 TRIM39Q9HCM9 518 aa7.57□□□□□ -1.2
LINC01961-201ENST00000449954 PLA2G3Q9NZ20 509 aa7.57□□□□□ -1.2
LINC01961-201ENST00000449954 PTGFRNQ9P2B2 879 aa7.57□□□□□ -1.2
LINC01961-201ENST00000449954 PKD1L1Q8TDX9 2849 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 CPAMD8Q8IZJ3 1885 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 A0A0J9YYE9 177 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 GSAPA4D1B5 854 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 RGSL1A5PLK6 1076 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 BECN2A8MW95 431 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 GOLGA8SH3BPF8 625 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 DDX3YO15523 660 aaKnown RBP7.56□□□□□ -1.2
LINC01961-201ENST00000449954 ZSCAN9O15535 394 aaPredicted RBP7.56□□□□□ -1.2
LINC01961-201ENST00000449954 KCNJ13O60928 360 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 OR2B3O76000 313 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 SLC25A14O95258 325 aaPredicted RBP7.56□□□□□ -1.2
LINC01961-201ENST00000449954 TRBC1P01850 177 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 ACPPP15309 386 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 USP8P40818 1118 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 PTPN9P43378 593 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 LMAN1P49257 510 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 EPHB1P54762 984 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 FOXL2P58012 376 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 DCAF7P61962 342 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 AP2B1P63010 937 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 LRRC63Q05C16 580 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 RUNX1T1Q06455 604 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 PTPRRQ15256 657 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 C15orf59Q2T9L4 293 aaPredicted RBP7.56□□□□□ -1.2
LINC01961-201ENST00000449954 ATG9BQ674R7 924 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 PDPK2PQ6A1A2 396 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 FBXO38Q6PIJ6 1188 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 CEP128Q6ZU80 1094 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 ZZZ3Q8IYH5 903 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 PYROXD2Q8N2H3 581 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 BBS5Q8N3I7 341 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 EMC1Q8N766 993 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 PIH1D2Q8WWB5 315 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 RND1Q92730 232 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 CELF6Q96J87 481 aaKnown RBP7.56□□□□□ -1.2
LINC01961-201ENST00000449954 PPM1MQ96MI6 270 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 WDR24Q96S15 920 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 TRIM51Q9BSJ1 452 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 PITPNM3Q9BZ71 974 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 MAGEB5Q9BZ81 275 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 UCK2Q9BZX2 261 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 SLC26A1Q9H2B4 701 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 FAM83DQ9H4H8 585 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 PKD2L2Q9NZM6 624 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 RNF6Q9Y252 685 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 WDR37Q9Y2I8 494 aa7.56□□□□□ -1.2
LINC01961-201ENST00000449954 ASPDHA6ND91 283 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 A6NNC1 897 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 H3BMH7 237 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 TTI1O43156 1089 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 ASNA1O43681 348 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 WISP2O76076 250 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 BMP10O95393 424 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 WDPCPO95876 746 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 PRR35P0CG20 571 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 PIM1P11309 404 aaPredicted RBP7.55□□□□□ -1.2
LINC01961-201ENST00000449954 MTHFD1P11586 935 aaKnown RBP7.55□□□□□ -1.2
LINC01961-201ENST00000449954 ST6GAL1P15907 406 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 BMP7P18075 431 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 HLA-DPA1P20036 260 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 SYT1P21579 422 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 EPHA1P21709 976 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 IL4RP24394 825 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 ME1P48163 572 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 SPINT3P49223 89 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 AIF1P55008 147 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 TPI1P60174 286 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 RPE65Q16518 533 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 SLC5A12Q1EHB4 618 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 CCDC14Q49A88 953 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 RAB6CQ53S08 254 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 ZNF766Q5HY98 468 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 Q5PR19 223 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 HIBCHQ6NVY1 386 aaPredicted RBP7.55□□□□□ -1.2
LINC01961-201ENST00000449954 TTI2Q6NXR4 508 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 TLDC1Q6P9B6 456 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 CDHR3Q6ZTQ4 885 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 ADGRG6Q86SQ4 1221 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 ZNF547Q8IVP9 402 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 CIARTQ8N365 385 aaPredicted RBP7.55□□□□□ -1.2
LINC01961-201ENST00000449954 BRIX1Q8TDN6 353 aaKnown RBP7.55□□□□□ -1.2
LINC01961-201ENST00000449954 DENND1AQ8TEH3 1009 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 PSMF1Q92530 271 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 CENPIQ92674 756 aaPredicted RBP7.55□□□□□ -1.2
LINC01961-201ENST00000449954 DLG3Q92796 817 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 MGME1Q9BQP7 344 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 ZSCAN5AQ9BUG6 496 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 NAA15Q9BXJ9 866 aaKnown RBP7.55□□□□□ -1.2
LINC01961-201ENST00000449954 SLC39A8Q9C0K1 460 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 RAB6CQ9H0N0 254 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms