RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 PLAC1Q9HBJ0 212 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 PDE7BQ9NP56 450 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 OR6C2Q9NZP2 312 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 GALPQ9UBC7 116 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 MED16Q9Y2X0 877 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 SAR1BQ9Y6B6 198 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 BOD1L1Q8NFC6 3051 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 DNALI1O14645 258 aaPredicted RBP13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 KIAA0754O94854 1291 aa13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 PRB1P04280 392 aa13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 ITGB2P05107 769 aa13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 APOA4P06727 396 aa13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 CHRM5P08912 532 aaPredicted RBP13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 OGNP20774 298 aaKnown RBP13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 PEBP1P30086 187 aaKnown RBP13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 FMO4P31512 558 aa13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 GABRA4P48169 554 aa13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 PRKAA1Q13131 559 aa13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 TUBB3Q13509 450 aa13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 DHX34Q14147 1143 aaKnown RBP13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 GPR19Q15760 415 aa13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 ZIC1Q15915 447 aa13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 TBR1Q16650 682 aa13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 MSS51Q4VC12 460 aa13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 PLEKHS1Q5SXH7 462 aa13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 PTRHD1Q6GMV3 140 aaKnown RBP13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 UNC5DQ6UXZ4 953 aa13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 ZNF517Q6ZMY9 492 aaPredicted RBP13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 LINC01555Q8NAE3 123 aa13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 SLC38A9Q8NBW4 561 aa13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 GALNT6Q8NCL4 622 aa13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 RNF31Q96EP0 1072 aa13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 NAPGQ99747 312 aaPredicted RBP13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 SEMA4CQ9C0C4 833 aa13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 CHRNA10Q9GZZ6 450 aa13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 ACTR10Q9NZ32 417 aa13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 IL1RAPL1Q9NZN1 696 aa13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 GNPTGQ9UJJ9 305 aa13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 RARRES3Q9UL19 164 aa13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 RPS6KL1Q9Y6S9 549 aa13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 FAM169AQ9Y6X4 670 aa13.62□□□□□ -0.23
RTFDC1-204ENST00000449062 PIPSLA2A3N6 862 aa13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 C2orf74A8MZ97 194 aa13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 H3BMH7 237 aa13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 KPNA5O15131 536 aa13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 NKX2-8O15522 239 aa13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 PRICKLE3O43900 615 aaPredicted RBP13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 USP1O94782 785 aa13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 ESR1P03372 595 aa13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 PVRP15151 417 aa13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 UGT2B7P16662 529 aa13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 SHMT2P34897 504 aa13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 EIF3BP55884 814 aaKnown RBP13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 SYTL3Q4VX76 610 aa13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 CRTC2Q53ET0 693 aaPredicted RBP13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 CASC4Q6P4E1 433 aa13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 ZNF549Q6P9A3 640 aa13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 SPESP1Q6UW49 350 aa13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 RASGRP3Q8IV61 690 aa13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 IGDCC3Q8IVU1 814 aa13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 DENND6AQ8IWF6 608 aa13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 LMNTD1Q8N9Z9 388 aa13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 OR8K5Q8NH50 307 aa13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 CAPZA3Q96KX2 299 aa13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 PANX3Q96QZ0 392 aa13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 TSSK1BQ9BXA7 367 aa13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 FAM60AQ9NP50 221 aa13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 WDR70Q9NW82 654 aa13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 PADI1Q9ULC6 663 aa13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 PLAGL1Q9UM63 463 aa13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 CRYL1Q9Y2S2 319 aa13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 TDRKHQ9Y2W6 561 aaKnown RBP13.61□□□□□ -0.23
RTFDC1-204ENST00000449062 GSAPA4D1B5 854 aa13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 CTAGE9A4FU28 777 aa13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 HCRTR1O43613 425 aa13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 NIPSNAP2O75323 286 aa13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 MATN4O95460 622 aa13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 NTRK1P04629 796 aa13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 F7P08709 466 aaPredicted RBP13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 PKMP14618 531 aaKnown RBP13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 CDH3P22223 829 aa13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 PKLRP30613 574 aa13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 CBLBQ13191 982 aa13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 CTBP1Q13363 440 aa13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 PPP1R7Q15435 360 aa13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 RNF187Q5TA31 235 aaPredicted RBP13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 PRAMEF17Q5VTA0 474 aa13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 CDHR3Q6ZTQ4 885 aa13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 SYDE1Q6ZW31 735 aaPredicted RBP13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 HOOK3Q86VS8 718 aa13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 SPNS2Q8IVW8 549 aa13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 ZSCAN1Q8NBB4 408 aa13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 OR1L3Q8NH93 324 aa13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 EXTL1Q92935 676 aa13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 ZNF669Q96BR6 464 aaPredicted RBP13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 SLC30A3Q99726 388 aa13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 EBNA1BP2Q99848 306 aaKnown RBP13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 GPN2Q9H9Y4 310 aaPredicted RBP13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 SYTL2Q9HCH5 934 aa13.6□□□□□ -0.23
RTFDC1-204ENST00000449062 INTS10Q9NVR2 710 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms